RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 DNERQ8NFT8 737 aa20.14■□□□□ 0.81
USP35-202ENST00000528910 LENG1Q96BZ8 264 aaPredicted RBP20.14■□□□□ 0.81
USP35-202ENST00000528910 TCEANC2Q96MN5 208 aa20.14■□□□□ 0.81
USP35-202ENST00000528910 PIGSQ96S52 555 aa20.14■□□□□ 0.81
USP35-202ENST00000528910 LZTS2Q9BRK4 669 aa20.14■□□□□ 0.81
USP35-202ENST00000528910 DUSP11O75319 330 aaKnown RBP20.13■□□□□ 0.81
USP35-202ENST00000528910 TRAF1Q13077 416 aa20.13■□□□□ 0.81
USP35-202ENST00000528910 LRRC41Q15345 812 aa20.13■□□□□ 0.81
USP35-202ENST00000528910 APOA5Q6Q788 366 aa20.13■□□□□ 0.81
USP35-202ENST00000528910 HOMER1Q86YM7 354 aa20.13■□□□□ 0.81
USP35-202ENST00000528910 VTA1Q9NP79 307 aa20.13■□□□□ 0.81
USP35-202ENST00000528910 PNMA6FA0A0J9YX94 578 aa20.12■□□□□ 0.81
USP35-202ENST00000528910 KBTBD13C9JR72 458 aa20.12■□□□□ 0.81
USP35-202ENST00000528910 PLEKHA8P1O95397 391 aa20.12■□□□□ 0.81
USP35-202ENST00000528910 RXRAP19793 462 aa20.12■□□□□ 0.81
USP35-202ENST00000528910 HSD17B4P51659 736 aa20.12■□□□□ 0.81
USP35-202ENST00000528910 RCAN1P53805 252 aa20.12■□□□□ 0.81
USP35-202ENST00000528910 GJC2Q5T442 439 aaPredicted RBP20.12■□□□□ 0.81
USP35-202ENST00000528910 MICU3Q86XE3 530 aa20.12■□□□□ 0.81
USP35-202ENST00000528910 FBXO16Q8IX29 292 aaPredicted RBP20.12■□□□□ 0.81
USP35-202ENST00000528910 SAMD3Q8N6K7 520 aa20.12■□□□□ 0.81
USP35-202ENST00000528910 SYTL5Q8TDW5 730 aaPredicted RBP20.12■□□□□ 0.81
USP35-202ENST00000528910 JAKMIP1Q96N16 626 aaKnown RBP20.12■□□□□ 0.81
USP35-202ENST00000528910 USP26Q9BXU7 913 aa20.12■□□□□ 0.81
USP35-202ENST00000528910 UPF3AQ9H1J1 476 aaKnown RBP20.12■□□□□ 0.81
USP35-202ENST00000528910 COL20A1Q9P218 1284 aa20.12■□□□□ 0.81
USP35-202ENST00000528910 PCDHA1Q9Y5I3 950 aa20.12■□□□□ 0.81
USP35-202ENST00000528910 DDX49Q9Y6V7 483 aaKnown RBP20.12■□□□□ 0.81
USP35-202ENST00000528910 NID2Q14112 1375 aa20.11■□□□□ 0.81
USP35-202ENST00000528910 CST5P28325 142 aaPredicted RBP20.11■□□□□ 0.81
USP35-202ENST00000528910 NKX3-2P78367 333 aa20.11■□□□□ 0.81
USP35-202ENST00000528910 BLOC1S2Q6QNY1 142 aa20.11■□□□□ 0.81
USP35-202ENST00000528910 TMTC3Q6ZXV5 915 aa20.11■□□□□ 0.81
USP35-202ENST00000528910 FBXL16Q8N461 479 aa20.11■□□□□ 0.81
USP35-202ENST00000528910 TBC1D5Q92609 795 aa20.11■□□□□ 0.81
USP35-202ENST00000528910 DPF3Q92784 378 aa20.11■□□□□ 0.81
USP35-202ENST00000528910 MAP3K20Q9NYL2 800 aaKnown RBP20.11■□□□□ 0.81
USP35-202ENST00000528910 PHF24Q9UPV7 400 aa20.11■□□□□ 0.81
USP35-202ENST00000528910 PGK1P00558 417 aa20.1■□□□□ 0.81
USP35-202ENST00000528910 TAPT1Q6NXT6 567 aa20.1■□□□□ 0.81
USP35-202ENST00000528910 RNF180Q86T96 592 aa20.1■□□□□ 0.81
USP35-202ENST00000528910 SRBD1Q8N5C6 995 aaKnown RBP20.1■□□□□ 0.81
USP35-202ENST00000528910 FANCBQ8NB91 859 aa20.1■□□□□ 0.81
USP35-202ENST00000528910 KLHDC9Q8NEP7 349 aa20.1■□□□□ 0.81
USP35-202ENST00000528910 MPHOSPH6Q99547 160 aaKnown RBP20.1■□□□□ 0.81
USP35-202ENST00000528910 AGXT2Q9BYV1 514 aa20.1■□□□□ 0.81
USP35-202ENST00000528910 BRPF3Q9ULD4 1205 aa20.1■□□□□ 0.81
USP35-202ENST00000528910 GNEQ9Y223 722 aaKnown RBP20.1■□□□□ 0.81
USP35-202ENST00000528910 LTBP2Q14767 1821 aa20.1■□□□□ 0.81
USP35-202ENST00000528910 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.09■□□□□ 0.81
USP35-202ENST00000528910 EVI5O60447 810 aa20.09■□□□□ 0.81
USP35-202ENST00000528910 CPA1P15085 419 aa20.09■□□□□ 0.81
USP35-202ENST00000528910 RPS6KB1P23443 525 aa20.09■□□□□ 0.81
USP35-202ENST00000528910 ADCYAP1R1P41586 468 aa20.09■□□□□ 0.81
USP35-202ENST00000528910 GJA9P57773 515 aa20.09■□□□□ 0.81
USP35-202ENST00000528910 SNX17Q15036 470 aa20.09■□□□□ 0.81
USP35-202ENST00000528910 SYNE3Q6ZMZ3 975 aa20.09■□□□□ 0.81
USP35-202ENST00000528910 RAB11FIP4Q86YS3 637 aa20.09■□□□□ 0.81
USP35-202ENST00000528910 RRP36Q96EU6 259 aaKnown RBP20.09■□□□□ 0.81
USP35-202ENST00000528910 SENP6Q9GZR1 1112 aaPredicted RBP20.09■□□□□ 0.81
USP35-202ENST00000528910 RBM28Q9NW13 759 aaKnown RBP20.09■□□□□ 0.81
USP35-202ENST00000528910 NR2E3Q9Y5X4 410 aa20.09■□□□□ 0.81
USP35-202ENST00000528910 CNTNAP5Q8WYK1 1306 aa20.08■□□□□ 0.81
USP35-202ENST00000528910 RBM47A0AV96 593 aaKnown RBP20.08■□□□□ 0.81
USP35-202ENST00000528910 B4DLN1 442 aa20.08■□□□□ 0.81
USP35-202ENST00000528910 H0YGN5 161 aa20.08■□□□□ 0.81
USP35-202ENST00000528910 ZBTB43O43298 467 aa20.08■□□□□ 0.81
USP35-202ENST00000528910 PSMA5P28066 241 aa20.08■□□□□ 0.81
USP35-202ENST00000528910 MRPL12P52815 198 aaKnown RBP20.08■□□□□ 0.81
USP35-202ENST00000528910 TNFAIP2Q03169 654 aa20.08■□□□□ 0.81
USP35-202ENST00000528910 LRRC26Q2I0M4 334 aa20.08■□□□□ 0.81
USP35-202ENST00000528910 CCSAPQ6IQ19 270 aaPredicted RBP20.08■□□□□ 0.81
USP35-202ENST00000528910 EEPD1Q7L9B9 569 aa20.08■□□□□ 0.81
USP35-202ENST00000528910 TSEN34Q9BSV6 310 aaKnown RBP20.08■□□□□ 0.81
USP35-202ENST00000528910 PDGFCQ9NRA1 345 aa20.08■□□□□ 0.81
USP35-202ENST00000528910 KLF18A0A0U1RQI7 1052 aa20.07■□□□□ 0.8
USP35-202ENST00000528910 MYADML2A6NDP7 307 aa20.07■□□□□ 0.8
USP35-202ENST00000528910 CTAGE5O15320 804 aa20.07■□□□□ 0.8
USP35-202ENST00000528910 CFBP00751 764 aa20.07■□□□□ 0.8
USP35-202ENST00000528910 SMPD1P17405 629 aa20.07■□□□□ 0.8
USP35-202ENST00000528910 CASTP20810 708 aaKnown RBP20.07■□□□□ 0.8
USP35-202ENST00000528910 PDE4DQ08499 809 aa20.07■□□□□ 0.8
USP35-202ENST00000528910 RTN1Q16799 776 aa20.07■□□□□ 0.8
USP35-202ENST00000528910 IQSEC1Q6DN90 963 aa20.07■□□□□ 0.8
USP35-202ENST00000528910 Q6ZUG5 572 aa20.07■□□□□ 0.8
USP35-202ENST00000528910 TLK2Q86UE8 772 aa20.07■□□□□ 0.8
USP35-202ENST00000528910 NSUN6Q8TEA1 469 aaKnown RBP20.07■□□□□ 0.8
USP35-202ENST00000528910 TAAR1Q96RJ0 339 aa20.07■□□□□ 0.8
USP35-202ENST00000528910 SEC63Q9UGP8 760 aaKnown RBP20.07■□□□□ 0.8
USP35-202ENST00000528910 Q9Y3F1 56 aa20.07■□□□□ 0.8
USP35-202ENST00000528910 FRMPD4Q14CM0 1322 aa20.06■□□□□ 0.8
USP35-202ENST00000528910 MOXD2PA6NHM9 499 aa20.06■□□□□ 0.8
USP35-202ENST00000528910 FUT2Q10981 343 aa20.06■□□□□ 0.8
USP35-202ENST00000528910 C1orf53Q5VUE5 145 aa20.06■□□□□ 0.8
USP35-202ENST00000528910 C7orf61Q8IZ16 206 aa20.06■□□□□ 0.8
USP35-202ENST00000528910 CMTR1Q8N1G2 835 aaKnown RBP20.06■□□□□ 0.8
USP35-202ENST00000528910 IWS1Q96ST2 819 aa20.06■□□□□ 0.8
USP35-202ENST00000528910 RMDN3Q96TC7 470 aa20.06■□□□□ 0.8
USP35-202ENST00000528910 TM6SF1Q9BZW5 370 aa20.06■□□□□ 0.8
USP35-202ENST00000528910 ZSWIM6Q9HCJ5 1215 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms