RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 SNHG28P0DPA3 235 aa20.55■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 CPT1AP50416 773 aa20.55■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 ZNF543Q08ER8 600 aa20.55■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 BRDTQ58F21 947 aaPredicted RBP20.55■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 RILPL2Q969X0 211 aa20.55■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 LNPKQ9C0E8 428 aa20.55■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 ZNF576Q9H609 170 aa20.55■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 GPCPD1Q9NPB8 672 aa20.55■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 PDGFCQ9NRA1 345 aa20.55■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 UNC80Q8N2C7 3258 aa20.55■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 RAD50Q92878 1312 aa20.54■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 NFIBO00712 420 aa20.54■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 NKRFO15226 690 aaKnown RBP eCLIP20.54■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 HAND2P61296 217 aa20.54■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 RAB30Q15771 203 aa20.54■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 RNF207Q6ZRF8 634 aa20.54■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 SMC5Q8IY18 1101 aa20.54■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 DNERQ8NFT8 737 aa20.54■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 COL25A1Q9BXS0 654 aaPredicted RBP20.54■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 RBM47A0AV96 593 aaKnown RBP20.53■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 HIP1O00291 1037 aa20.53■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 CYP2C18P33260 490 aa20.53■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 ZNF365Q70YC5 407 aa20.53■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 C16orf59Q7L2K0 433 aa20.53■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 IQCA1Q86XH1 822 aa20.53■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 DGKHQ86XP1 1220 aa20.53■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 HERVK_113Q902F9 699 aa20.53■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 WDR11Q9BZH6 1224 aa20.53■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 OSBPL3Q9H4L5 887 aa20.53■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 ZNF213O14771 459 aa20.52■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 SUPT20HL2P0C7V6 817 aa20.52■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 SDSP20132 328 aa20.52■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 PDE4DQ08499 809 aa20.52■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 TBC1D10CQ8IV04 446 aa20.52■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 RPUSD2Q8IZ73 545 aaKnown RBP20.52■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 CLEC4DQ8WXI8 215 aa20.52■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 GPHNQ9NQX3 736 aaPredicted RBP20.52■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 MSRAQ9UJ68 235 aa20.52■□□□□ 0.88
CKLF-CMTM1-202ENST00000527845 B4GALT4O60513 344 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 KPNA6O60684 536 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 FGBP02675 491 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 ACRP10323 421 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 CALML3P27482 149 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 GRIN2CQ14957 1233 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 PPP2R5BQ15173 497 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 SLC30A10Q6XR72 485 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 CHD1LQ86WJ1 897 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 RGS22Q8NE09 1264 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 SCFD2Q8WU76 684 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 GAS2L1Q99501 681 aaPredicted RBP20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 NOC4LQ9BVI4 516 aaKnown RBP20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 PBX4Q9BYU1 374 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 GRIN2DO15399 1336 aa20.51■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 PFKMP08237 780 aa20.5■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 EDNRBP24530 442 aa20.5■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 RPS6P62753 249 aaKnown RBP20.5■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 OR6J1Q8NGC5 347 aa20.5■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 SYMPKQ92797 1274 aaKnown RBP20.5■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 PURBQ96QR8 312 aaKnown RBP20.5■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 MTG1Q9BT17 334 aaPredicted RBP20.5■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 ALDH8A1Q9H2A2 487 aaPredicted RBP20.5■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 DIAPH3Q9NSV4 1193 aa20.5■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 DDX49Q9Y6V7 483 aaKnown RBP20.5■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 NEDD4P46934 1319 aa20.5■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 CDH23Q9H251 3354 aa20.49■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 PSMC6P62333 389 aa20.49■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 PURAQ00577 322 aaKnown RBP20.49■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 TRPV6Q9H1D0 765 aa20.49■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 SCN10AQ9Y5Y9 1956 aa20.48■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 NUCB1Q02818 461 aa20.48■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 ASPRV1Q53RT3 343 aa20.48■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 B4GALNT3Q6L9W6 998 aa20.48■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 PLEKHM2Q8IWE5 1019 aa20.48■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 PNMA1Q8ND90 353 aa20.48■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 KAT14Q9H8E8 782 aa20.48■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 ABCB11O95342 1321 aa20.48■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 MYL3P08590 195 aa20.47■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 PTPN11Q06124 597 aaPredicted RBP20.47■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 TTLL4Q14679 1199 aa20.47■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 IMMTQ16891 758 aaKnown RBP20.47■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 TMEM63BQ5T3F8 832 aa20.47■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 NFRKBQ6P4R8 1299 aa20.47■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 ANKS1AQ92625 1134 aa20.47■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 DSCC1Q9BVC3 393 aa20.47■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 WNT8AQ9H1J5 351 aa20.47■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 CTNNA3Q9UI47 895 aa20.47■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 TNKSO95271 1327 aa20.47■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 UMODL1Q5DID0 1318 aa20.47■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 GBF1Q92538 1859 aa20.46■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 A6NJR5 290 aa20.46■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 PTGS1P23219 599 aa20.46■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 CCL23P55773 120 aa20.46■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 CDC37Q16543 378 aaPredicted RBP20.46■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 USH1GQ495M9 461 aa20.46■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 CWC27Q6UX04 472 aaKnown RBP20.46■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 MCF2L2Q86YR7 1114 aa20.46■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 ZKSCAN3Q9BRR0 538 aa20.46■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 KRT23Q9C075 422 aa20.46■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 CNNM2Q9H8M5 875 aa20.46■□□□□ 0.87
CKLF-CMTM1-202ENST00000527845 MYH6P13533 1939 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms