RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 DUSP28Q4G0W2 176 aa16.39■□□□□ 0.21
CSTF3-206ENST00000524827 NECAB3Q96P71 396 aaPredicted RBP16.39■□□□□ 0.21
CSTF3-206ENST00000524827 TSPYL2Q9H2G4 693 aaPredicted RBP16.39■□□□□ 0.21
CSTF3-206ENST00000524827 IL17RBQ9NRM6 502 aa16.39■□□□□ 0.21
CSTF3-206ENST00000524827 MTMR7Q9Y216 660 aa16.39■□□□□ 0.21
CSTF3-206ENST00000524827 SCN5AQ14524 2016 aa16.38■□□□□ 0.21
CSTF3-206ENST00000524827 REV3LO60673 3130 aa16.38■□□□□ 0.21
CSTF3-206ENST00000524827 TSPY2A6NKD2 308 aa16.38■□□□□ 0.21
CSTF3-206ENST00000524827 ICAM1P05362 532 aa16.38■□□□□ 0.21
CSTF3-206ENST00000524827 PFKMP08237 780 aa16.38■□□□□ 0.21
CSTF3-206ENST00000524827 ZMYM1Q5SVZ6 1142 aa16.38■□□□□ 0.21
CSTF3-206ENST00000524827 FSD1Q9BTV5 496 aa16.38■□□□□ 0.21
CSTF3-206ENST00000524827 INCENPQ9NQS7 918 aa16.38■□□□□ 0.21
CSTF3-206ENST00000524827 POLR3EQ9NVU0 708 aa16.38■□□□□ 0.21
CSTF3-206ENST00000524827 TNKSO95271 1327 aa16.38■□□□□ 0.21
CSTF3-206ENST00000524827 TRANK1O15050 2925 aa16.38■□□□□ 0.21
CSTF3-206ENST00000524827 FOXP2O15409 715 aa16.37■□□□□ 0.21
CSTF3-206ENST00000524827 SUPT20HL2P0C7V6 817 aa16.37■□□□□ 0.21
CSTF3-206ENST00000524827 ALDH5A1P51649 535 aaPredicted RBP16.37■□□□□ 0.21
CSTF3-206ENST00000524827 PURAQ00577 322 aaKnown RBP16.37■□□□□ 0.21
CSTF3-206ENST00000524827 TFF2Q03403 129 aa16.37■□□□□ 0.21
CSTF3-206ENST00000524827 CTDSPL2Q05D32 466 aa16.37■□□□□ 0.21
CSTF3-206ENST00000524827 BAATQ14032 418 aaPredicted RBP16.37■□□□□ 0.21
CSTF3-206ENST00000524827 CCDC96Q2M329 555 aa16.37■□□□□ 0.21
CSTF3-206ENST00000524827 DEFB128Q7Z7B8 93 aa16.37■□□□□ 0.21
CSTF3-206ENST00000524827 PI4K2BQ8TCG2 481 aa16.37■□□□□ 0.21
CSTF3-206ENST00000524827 WDR11Q9BZH6 1224 aa16.37■□□□□ 0.21
CSTF3-206ENST00000524827 RANBP17Q9H2T7 1088 aaKnown RBP16.37■□□□□ 0.21
CSTF3-206ENST00000524827 ADD3Q9UEY8 706 aaKnown RBP16.37■□□□□ 0.21
CSTF3-206ENST00000524827 TTC41PQ6P2S7 1318 aa16.37■□□□□ 0.21
CSTF3-206ENST00000524827 SCN10AQ9Y5Y9 1956 aa16.37■□□□□ 0.21
CSTF3-206ENST00000524827 NFIBO00712 420 aa16.36■□□□□ 0.21
CSTF3-206ENST00000524827 CA3P07451 260 aa16.36■□□□□ 0.21
CSTF3-206ENST00000524827 MYL3P08590 195 aa16.36■□□□□ 0.21
CSTF3-206ENST00000524827 BMP1P13497 986 aa16.36■□□□□ 0.21
CSTF3-206ENST00000524827 TMEM67Q5HYA8 995 aa16.36■□□□□ 0.21
CSTF3-206ENST00000524827 TTBK2Q6IQ55 1244 aa16.36■□□□□ 0.21
CSTF3-206ENST00000524827 DCAF4Q8WV16 495 aa16.36■□□□□ 0.21
CSTF3-206ENST00000524827 RBM47A0AV96 593 aaKnown RBP16.35■□□□□ 0.21
CSTF3-206ENST00000524827 RFXAPO00287 272 aa16.35■□□□□ 0.21
CSTF3-206ENST00000524827 ERC2O15083 957 aa16.35■□□□□ 0.21
CSTF3-206ENST00000524827 RANBP6O60518 1105 aaKnown RBP16.35■□□□□ 0.21
CSTF3-206ENST00000524827 SLC16A2P36021 539 aa16.35■□□□□ 0.21
CSTF3-206ENST00000524827 NOVP48745 357 aa16.35■□□□□ 0.21
CSTF3-206ENST00000524827 CPT1AP50416 773 aa16.35■□□□□ 0.21
CSTF3-206ENST00000524827 KCNQ1P51787 676 aa16.35■□□□□ 0.21
CSTF3-206ENST00000524827 SKIV2LQ15477 1246 aaKnown RBP16.35■□□□□ 0.21
CSTF3-206ENST00000524827 OR6J1Q8NGC5 347 aa16.35■□□□□ 0.21
CSTF3-206ENST00000524827 OTUD7AQ8TE49 926 aaPredicted RBP16.35■□□□□ 0.21
CSTF3-206ENST00000524827 MTG1Q9BT17 334 aaPredicted RBP16.35■□□□□ 0.21
CSTF3-206ENST00000524827 MTCH2Q9Y6C9 303 aa16.35■□□□□ 0.21
CSTF3-206ENST00000524827 TANC1Q9C0D5 1861 aa16.35■□□□□ 0.21
CSTF3-206ENST00000524827 LOC102724159A0A0B4J2E5 919 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 PTPDC1A2A3K4 754 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 EPOPA6NHQ4 379 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 GTPBP6O43824 516 aaPredicted RBP16.34■□□□□ 0.21
CSTF3-206ENST00000524827 ACTN1P12814 892 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 POU3F3P20264 500 aaPredicted RBP16.34■□□□□ 0.21
CSTF3-206ENST00000524827 PLA2G5P39877 138 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 PWP2Q15269 919 aaKnown RBP16.34■□□□□ 0.21
CSTF3-206ENST00000524827 AAK1Q2M2I8 961 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 NBPF20Q3BBV1 942 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 FAM47CQ5HY64 1035 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 SYDE2Q5VT97 1194 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 BTNL9Q6UXG8 535 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 SLC30A10Q6XR72 485 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 PPP1R13LQ8WUF5 828 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 SLC9A7Q96T83 725 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 CERS4Q9HA82 394 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 GPHNQ9NQX3 736 aaPredicted RBP16.34■□□□□ 0.21
CSTF3-206ENST00000524827 XIRP2A4UGR9 3374 aa16.34■□□□□ 0.21
CSTF3-206ENST00000524827 ORC4O43929 436 aa16.33■□□□□ 0.2
CSTF3-206ENST00000524827 ARHGEF15O94989 841 aa16.33■□□□□ 0.2
CSTF3-206ENST00000524827 CALML3P27482 149 aa16.33■□□□□ 0.2
CSTF3-206ENST00000524827 RFC2P35250 354 aa16.33■□□□□ 0.2
CSTF3-206ENST00000524827 ANAPC4Q9UJX5 808 aa16.33■□□□□ 0.2
CSTF3-206ENST00000524827 FRMPD2Q68DX3 1309 aaPredicted RBP16.33■□□□□ 0.2
CSTF3-206ENST00000524827 TET1Q8NFU7 2136 aa16.33■□□□□ 0.2
CSTF3-206ENST00000524827 PITPNM1O00562 1244 aa16.32■□□□□ 0.2
CSTF3-206ENST00000524827 PPP2R5BQ15173 497 aa16.32■□□□□ 0.2
CSTF3-206ENST00000524827 BRDTQ58F21 947 aaPredicted RBP16.32■□□□□ 0.2
CSTF3-206ENST00000524827 VPS53Q5VIR6 699 aa16.32■□□□□ 0.2
CSTF3-206ENST00000524827 KRT40Q6A162 431 aa16.32■□□□□ 0.2
CSTF3-206ENST00000524827 NFRKBQ6P4R8 1299 aa16.32■□□□□ 0.2
CSTF3-206ENST00000524827 CLEC4DQ8WXI8 215 aa16.32■□□□□ 0.2
CSTF3-206ENST00000524827 RAD50Q92878 1312 aa16.32■□□□□ 0.2
CSTF3-206ENST00000524827 GPCPD1Q9NPB8 672 aa16.32■□□□□ 0.2
CSTF3-206ENST00000524827 NKRFO15226 690 aaKnown RBP eCLIP16.31■□□□□ 0.2
CSTF3-206ENST00000524827 IQCF3P0C7M6 154 aa16.31■□□□□ 0.2
CSTF3-206ENST00000524827 EDNRBP24530 442 aa16.31■□□□□ 0.2
CSTF3-206ENST00000524827 TAP1Q03518 808 aa16.31■□□□□ 0.2
CSTF3-206ENST00000524827 PDE4DQ08499 809 aa16.31■□□□□ 0.2
CSTF3-206ENST00000524827 RNF207Q6ZRF8 634 aa16.31■□□□□ 0.2
CSTF3-206ENST00000524827 HERC6Q8IVU3 1022 aa16.31■□□□□ 0.2
CSTF3-206ENST00000524827 RETREG2Q8NC44 543 aa16.31■□□□□ 0.2
CSTF3-206ENST00000524827 PHOSPHO2Q8TCD6 241 aa16.31■□□□□ 0.2
CSTF3-206ENST00000524827 SCFD2Q8WU76 684 aa16.31■□□□□ 0.2
CSTF3-206ENST00000524827 ARNTL2Q8WYA1 636 aa16.31■□□□□ 0.2
CSTF3-206ENST00000524827 COPS5Q92905 334 aa16.31■□□□□ 0.2
CSTF3-206ENST00000524827 TMEM47Q9BQJ4 181 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms