RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 GTF2A2P52657 109 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 CHRNEQ04844 493 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 PLCL1Q15111 1095 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 DALRD3Q5D0E6 543 aaKnown RBP5.55□□□□□ -1.52
SKP1-212ENST00000523966 STYK1Q6J9G0 422 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 SLC23A3Q6PIS1 610 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 ZNF574Q6ZN55 896 aaPredicted RBP5.55□□□□□ -1.52
SKP1-212ENST00000523966 SPRED2Q7Z698 418 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 CPNE8Q86YQ8 564 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 ANKS4BQ8N8V4 417 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 KREMEN2Q8NCW0 462 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 MFSD3Q96ES6 412 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 ADAMTS10Q9H324 1103 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 MAGEC2Q9UBF1 373 aaPredicted RBP5.55□□□□□ -1.52
SKP1-212ENST00000523966 TMEM59LQ9UK28 342 aa5.55□□□□□ -1.52
SKP1-212ENST00000523966 TIMM13Q9Y5L4 95 aaPredicted RBP5.55□□□□□ -1.52
SKP1-212ENST00000523966 A0A1W2PQ45 241 aaPredicted RBP5.54□□□□□ -1.52
SKP1-212ENST00000523966 A0A1W2PQY0 241 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 WTIPA6NIX2 430 aaPredicted RBP5.54□□□□□ -1.52
SKP1-212ENST00000523966 B4E1Z4 1266 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 IRS4O14654 1257 aaPredicted RBP5.54□□□□□ -1.52
SKP1-212ENST00000523966 OPA1O60313 960 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 MYCLP1P12525 358 aaPredicted RBP5.54□□□□□ -1.52
SKP1-212ENST00000523966 KIR2DL1P43626 348 aaPredicted RBP5.54□□□□□ -1.52
SKP1-212ENST00000523966 KIR2DL2P43627 348 aaPredicted RBP5.54□□□□□ -1.52
SKP1-212ENST00000523966 HK2P52789 917 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 GPR85P60893 370 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 RPL11P62913 178 aaKnown RBP5.54□□□□□ -1.52
SKP1-212ENST00000523966 GUCY1A3Q02108 690 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 NTRK3Q16288 839 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 TRIM61Q5EBN2 209 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 CT47A1Q5JQC4 288 aaPredicted RBP5.54□□□□□ -1.52
SKP1-212ENST00000523966 CNNM4Q6P4Q7 775 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 KCNT2Q6UVM3 1135 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 CEP128Q6ZU80 1094 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 UBE2R2Q712K3 238 aaPredicted RBP5.54□□□□□ -1.52
SKP1-212ENST00000523966 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.54□□□□□ -1.525e-46■■□□□ 14
SKP1-212ENST00000523966 USP33Q8TEY7 942 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 C1orf159Q96HA4 380 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 MAP6Q96JE9 813 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 ERVK13-1Q9NX77 482 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 BTG4Q9NY30 223 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 TRAF6Q9Y4K3 522 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 PCDHA2Q9Y5H9 948 aa5.54□□□□□ -1.52
SKP1-212ENST00000523966 SCO2A0A1W2PP80 73 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 KIAA1324LA8MWY0 1029 aaPredicted RBP5.53□□□□□ -1.52
SKP1-212ENST00000523966 GSTA4O15217 222 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 MED26O95402 600 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 ASLP04424 464 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 HMGB1P09429 215 aaKnown RBP5.53□□□□□ -1.52
SKP1-212ENST00000523966 RAC2P15153 192 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 SPINK2P20155 84 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 FUT4P22083 530 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 CNGA1P29973 690 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 NEK4P51957 841 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 RTP1P59025 263 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 LSAMPQ13449 338 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 TESK1Q15569 626 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 KIZQ2M2Z5 673 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 RALGPS1Q5JS13 557 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 ZMYM1Q5SVZ6 1142 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 GALNT18Q6P9A2 607 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 BRAPQ7Z569 592 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 ZC3H7AQ8IWR0 971 aaKnown RBP5.53□□□□□ -1.52
SKP1-212ENST00000523966 AHI1Q8N157 1196 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 SLC7A14Q8TBB6 771 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 CLUHP3Q96NS8 147 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 SLC52A2Q9HAB3 445 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 INTS7Q9NVH2 962 aaKnown RBP5.53□□□□□ -1.52
SKP1-212ENST00000523966 IFT57Q9NWB7 429 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 TMEFF2Q9UIK5 374 aaPredicted RBP5.53□□□□□ -1.52
SKP1-212ENST00000523966 NPFFR2Q9Y5X5 522 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 TAF6LQ9Y6J9 622 aa5.53□□□□□ -1.52
SKP1-212ENST00000523966 FITM1A5D6W6 292 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 KCNQ2O43526 872 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 CRTAMO95727 393 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 C6orf222P0C671 652 aaPredicted RBP5.52□□□□□ -1.53
SKP1-212ENST00000523966 ZGLP1P0C6A0 271 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 IGFALSP35858 605 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 MASP1P48740 699 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 CYP4F3Q08477 520 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 PAK1Q13153 545 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 PTPROQ16827 1216 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 DENND5AQ6IQ26 1287 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 LBX2Q6XYB7 198 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 RCBTB1Q8NDN9 531 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 GSTCDQ8NEC7 633 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 PDZD8Q8NEN9 1154 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 CHAC2Q8WUX2 184 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 PRDM7Q9NQW5 492 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 COA3Q9Y2R0 106 aaPredicted RBP5.52□□□□□ -1.53
SKP1-212ENST00000523966 PCDHA9Q9Y5H5 950 aa5.52□□□□□ -1.53
SKP1-212ENST00000523966 hCG_2014768A0A024R1R8 64 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.51□□□□□ -1.53
SKP1-212ENST00000523966 C7orf72A4D263 438 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 FADS2P1A8MWK0 482 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 FAM47E-STBD1D6RA91 191 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 ADAM23O75077 832 aa5.51□□□□□ -1.53
SKP1-212ENST00000523966 USP2O75604 605 aaPredicted RBP5.51□□□□□ -1.53
SKP1-212ENST00000523966 SRGAP2CP0DJJ0 459 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms