RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	GALNT12	Q8IXK2	581 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	PRSS33	Q8NF86	280 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	GIPC2	Q8TF65	315 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	TNFRSF25	Q93038	417 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	FRMD6	Q96NE9	622 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	KCNH6	Q9H252	994 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	ZNF576	Q9H609	170 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	PLXNB2	O15031	1838 aa		6.59	□□□□□ -1.35
PABPC1-223	ENST00000523636	COL1A1	P02452	1464 aa	Predicted RBP	6.59	□□□□□ -1.36
PABPC1-223	ENST00000523636	TECTA	O75443	2155 aa		6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	RAB11FIP3	O75154	756 aa		6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	GPT	P24298	496 aa		6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	GPLD1	P80108	840 aa		6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	LCE2C	Q5TA81	110 aa		6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	NBPF12	Q5TAG4	269 aa	Predicted RBP	6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	RAB44	Q7Z6P3	723 aa	Predicted RBP	6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	PRDM12	Q9H4Q4	367 aa		6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	ALG13	Q9NP73	1137 aa	Known RBP	6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	GDF2	Q9UK05	429 aa	Predicted RBP	6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	OGDHL	Q9ULD0	1010 aa		6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	RLF	Q13129	1914 aa		6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	COL4A6	Q14031	1691 aa		6.58	□□□□□ -1.36
PABPC1-223	ENST00000523636	LAMA5	O15230	3695 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	EP300	Q09472	2414 aa	Predicted RBP	6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	ADARB2-AS1	A8MUL3	147 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	EREG	O14944	169 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	WIPF1	O43516	503 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	WFS1	O76024	890 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	EDN3	P14138	238 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	FLT3LG	P49771	235 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	EPHB4	P54760	987 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	HYAL2	Q12891	473 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	GRAP	Q13588	217 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	RNFT1	Q5M7Z0	435 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	SLC10A5	Q5PT55	438 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	SPTY2D1	Q68D10	685 aa	Predicted RBP	6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	SULT6B1	Q6IMI4	303 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	ZNF34	Q8IZ26	560 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	TTC5	Q8N0Z6	440 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	GOLGA6L1	Q8N7Z2	621 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	TBC1D16	Q8TBP0	767 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	GRAPL	Q8TC17	118 aa	Predicted RBP	6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	CCDC74A	Q96AQ1	378 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	MDFI	Q99750	246 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	DEFB129	Q9H1M3	183 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	SALL4	Q9UJQ4	1053 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636	PCDHAC2	Q9Y5I4	1007 aa		6.57	□□□□□ -1.36
PABPC1-223	ENST00000523636		A0A0G2JMZ2	1700 aa		6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	GIPC1	O14908	333 aa		6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	CYP2E1	P05181	493 aa	Predicted RBP	6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	U2AF1L5	P0DN76	240 aa	Predicted RBP	6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	BCR	P11274	1271 aa		6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	HOXD10	P28358	340 aa		6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	PCBP4	P57723	403 aa	Known RBP	6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	U2AF1	Q01081	240 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	SLCO4C1	Q6ZQN7	724 aa		6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	TTLL7	Q6ZT98	887 aa		6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	APOBEC3F	Q8IUX4	373 aa	Known RBP	6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	GPATCH11	Q8N954	259 aa		6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	IL17RE	Q8NFR9	667 aa		6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	TMX4	Q9H1E5	349 aa	Predicted RBP	6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	KLF15	Q9UIH9	416 aa		6.56	□□□□□ -1.36
PABPC1-223	ENST00000523636	VAMP1	P23763	118 aa		6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	GTF2A2	P52657	109 aa		6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	KRT76	Q01546	638 aa		6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	TCF15	Q12870	199 aa		6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	MOGS	Q13724	837 aa		6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	VGLL4	Q14135	290 aa		6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	MTHFSD	Q2M296	383 aa	Known RBP	6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	DACT2	Q5SW24	774 aa		6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	TMC4	Q7Z404	712 aa		6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	CELF1	Q92879	486 aa	Known RBP	6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	FMNL2	Q96PY5	1086 aa		6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	UIMC1	Q96RL1	719 aa		6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	DUSP9	Q99956	384 aa	Known RBP	6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	OXCT2	Q9BYC2	517 aa	Predicted RBP	6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	ZCCHC17	Q9NP64	241 aa	Known RBP	6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	DNAJB12	Q9NXW2	375 aa	Known RBP	6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	KMT2E	Q8IZD2	1858 aa		6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	HELZ2	Q9BYK8	2649 aa	Known RBP	6.55	□□□□□ -1.36
PABPC1-223	ENST00000523636	ELOA3C	A0A087WX78	387 aa	Predicted RBP	6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	ELOA3D	A6NLF2	546 aa	Predicted RBP	6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	ZBTB42	B2RXF5	422 aa		6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	ERC2	O15083	957 aa		6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	SLURP2	P0DP57	97 aa		6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	HCLS1	P14317	486 aa	Predicted RBP	6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	GNA15	P30679	374 aa		6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	DAB2	P98082	770 aa		6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	TAGLN	Q01995	201 aa	Known RBP	6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	SF3A1	Q15459	793 aa	Known RBP	6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	ELOA3B	Q3SY89	546 aa		6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	KIAA0319	Q5VV43	1072 aa		6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	TMTC2	Q8N394	836 aa		6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	ELOA3	Q8NG57	546 aa		6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	BAD	Q92934	168 aa		6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	SGSM3	Q96HU1	749 aa		6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	SPACA7	Q96KW9	195 aa		6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	DNAJC2	Q99543	621 aa	Known RBP	6.54	□□□□□ -1.36
PABPC1-223	ENST00000523636	LBHD1	Q9BQE6	289 aa	Predicted RBP	6.54	□□□□□ -1.36

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