RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 PTGS1P23219 599 aa13.79□□□□□ -0.2
CTNNA1-237ENST00000523275 CALML3P27482 149 aa13.79□□□□□ -0.2
CTNNA1-237ENST00000523275 ALDH5A1P51649 535 aaPredicted RBP13.79□□□□□ -0.2
CTNNA1-237ENST00000523275 DUSP28Q4G0W2 176 aa13.79□□□□□ -0.2
CTNNA1-237ENST00000523275 TMEM63BQ5T3F8 832 aa13.79□□□□□ -0.2
CTNNA1-237ENST00000523275 SLC43A3Q8NBI5 491 aa13.79□□□□□ -0.2
CTNNA1-237ENST00000523275 ANKS1AQ92625 1134 aa13.79□□□□□ -0.2
CTNNA1-237ENST00000523275 DSCC1Q9BVC3 393 aa13.79□□□□□ -0.2
CTNNA1-237ENST00000523275 SEZ6LQ9BYH1 1024 aa13.79□□□□□ -0.2
CTNNA1-237ENST00000523275 WDR19Q8NEZ3 1342 aa13.79□□□□□ -0.2
CTNNA1-237ENST00000523275 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 RBM47A0AV96 593 aaKnown RBP13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 B4E1Z4 1266 aa13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 DLL1O00548 723 aa13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 RPS6P62753 249 aaKnown RBP13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 PPIGQ13427 754 aaKnown RBP eCLIP13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 ITGA7Q13683 1181 aa13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 IMMTQ16891 758 aaKnown RBP13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 SLC30A10Q6XR72 485 aa13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 C16orf59Q7L2K0 433 aa13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 TMEM199Q8N511 208 aa13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 PNMA1Q8ND90 353 aa13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 ZSCAN10Q96SZ4 725 aaPredicted RBP13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 MPHOSPH6Q99547 160 aaKnown RBP13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 CDX2Q99626 313 aaPredicted RBP13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 WDR11Q9BZH6 1224 aa13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 UBA5Q9GZZ9 404 aa13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 KAT14Q9H8E8 782 aa13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 ZSWIM5Q9P217 1185 aa13.78□□□□□ -0.2
CTNNA1-237ENST00000523275 B4DLN1 442 aa13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 GRIN2DO15399 1336 aa13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 CSF2RAP15509 400 aa13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 MRPL12P52815 198 aaKnown RBP13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 PDE4DQ08499 809 aa13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 ENAHQ8N8S7 591 aaPredicted RBP13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 RGS22Q8NE09 1264 aa13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 DNERQ8NFT8 737 aa13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.77□□□□□ -0.211e-7■■□□□ 11.9
CTNNA1-237ENST00000523275 PPP1R12CQ9BZL4 782 aa13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 KRT23Q9C075 422 aa13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 TTYH1Q9H313 450 aaPredicted RBP13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 CPVLQ9H3G5 476 aa13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 SUPT16HQ9Y5B9 1047 aaKnown RBP13.77□□□□□ -0.21
CTNNA1-237ENST00000523275 TMEM265A0A087WTH1 108 aa13.76□□□□□ -0.21
CTNNA1-237ENST00000523275 CYP2C18P33260 490 aa13.76□□□□□ -0.21
CTNNA1-237ENST00000523275 PSMC6P62333 389 aa13.76□□□□□ -0.21
CTNNA1-237ENST00000523275 USH1GQ495M9 461 aa13.76□□□□□ -0.21
CTNNA1-237ENST00000523275 ASPRV1Q53RT3 343 aa13.76□□□□□ -0.21
CTNNA1-237ENST00000523275 TMEM240Q5SV17 173 aa13.76□□□□□ -0.21
CTNNA1-237ENST00000523275 MAF1Q9H063 256 aa13.76□□□□□ -0.21
CTNNA1-237ENST00000523275 TRPV6Q9H1D0 765 aa13.76□□□□□ -0.21
CTNNA1-237ENST00000523275 CNNM2Q9H8M5 875 aa13.76□□□□□ -0.21
CTNNA1-237ENST00000523275 POLR3EQ9NVU0 708 aa13.76□□□□□ -0.21
CTNNA1-237ENST00000523275 PARP1P09874 1014 aaKnown RBP13.75□□□□□ -0.21
CTNNA1-237ENST00000523275 EDNRBP24530 442 aa13.75□□□□□ -0.21
CTNNA1-237ENST00000523275 CPT1AP50416 773 aa13.75□□□□□ -0.21
CTNNA1-237ENST00000523275 CDC37Q16543 378 aaPredicted RBP13.75□□□□□ -0.21
CTNNA1-237ENST00000523275 PSRC1Q6PGN9 363 aaPredicted RBP13.75□□□□□ -0.21
CTNNA1-237ENST00000523275 ZNF365Q70YC5 407 aa13.75□□□□□ -0.21
CTNNA1-237ENST00000523275 ADGRF4Q8IZF3 695 aa13.75□□□□□ -0.21
CTNNA1-237ENST00000523275 SCFD2Q8WU76 684 aa13.75□□□□□ -0.21
CTNNA1-237ENST00000523275 UBAC1Q9BSL1 405 aa13.75□□□□□ -0.21
CTNNA1-237ENST00000523275 HIPK3Q9H422 1215 aa13.75□□□□□ -0.21
CTNNA1-237ENST00000523275 IL23AQ9NPF7 189 aa13.75□□□□□ -0.21
CTNNA1-237ENST00000523275 COL6A3P12111 3177 aa13.75□□□□□ -0.21
CTNNA1-237ENST00000523275 TNKSO95271 1327 aa13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 ABCB11O95342 1321 aa13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 NKRFO15226 690 aaKnown RBP eCLIP13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 DHX16O60231 1041 aaKnown RBP13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 B4GALT4O60513 344 aa13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 MYL3P08590 195 aa13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 ACRP10323 421 aa13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 PDE4AP27815 886 aa13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 PURAQ00577 322 aaKnown RBP13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 PPP2R5BQ15173 497 aa13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 BRDTQ58F21 947 aaPredicted RBP13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 TTC22Q5TAA0 569 aa13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 RASIP1Q5U651 963 aa13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 OR6J1Q8NGC5 347 aa13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 NOC4LQ9BVI4 516 aaKnown RBP13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 VAT1LQ9HCJ6 419 aa13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 GPHNQ9NQX3 736 aaPredicted RBP13.74□□□□□ -0.21
CTNNA1-237ENST00000523275 KPNA6O60684 536 aa13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 FGBP02675 491 aa13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 TXNP10599 105 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 DNAJB2P25686 324 aa13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 QRICH1Q2TAL8 776 aa13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 IFIT1BQ5T764 474 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 FBXO11Q86XK2 927 aa13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 MCF2L2Q86YR7 1114 aa13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 SYTL5Q8TDW5 730 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 NSUN6Q8TEA1 469 aaKnown RBP13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 RUFY2Q8WXA3 655 aa13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 MYLIPQ8WY64 445 aa13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 TBC1D5Q92609 795 aa13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 MTG1Q9BT17 334 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 IL25Q9H293 177 aa13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 ALDH8A1Q9H2A2 487 aaPredicted RBP13.73□□□□□ -0.21
CTNNA1-237ENST00000523275 JMJD4Q9H9V9 463 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms