RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 TNFAIP1Q13829 316 aa19.04■□□□□ 0.64
SREK1-212ENST00000522912 USH1GQ495M9 461 aa19.04■□□□□ 0.64
SREK1-212ENST00000522912 CABP7Q86V35 215 aa19.04■□□□□ 0.64
SREK1-212ENST00000522912 MED15Q96RN5 788 aa19.04■□□□□ 0.64
SREK1-212ENST00000522912 TPM3P06753 285 aa19.03■□□□□ 0.64
SREK1-212ENST00000522912 ZYXQ15942 572 aaKnown RBP19.03■□□□□ 0.64
SREK1-212ENST00000522912 CCDC144BQ3MJ40 725 aa19.03■□□□□ 0.64
SREK1-212ENST00000522912 P2RX7Q99572 595 aaKnown RBP19.03■□□□□ 0.64
SREK1-212ENST00000522912 MMTAG2Q9BU76 263 aaKnown RBP19.03■□□□□ 0.64
SREK1-212ENST00000522912 IFNKQ9P0W0 207 aa19.03■□□□□ 0.64
SREK1-212ENST00000522912 DACH1Q9UI36 760 aa19.03■□□□□ 0.64
SREK1-212ENST00000522912 HACL1Q9UJ83 578 aa19.03■□□□□ 0.64
SREK1-212ENST00000522912 ASNSP08243 561 aa19.03■□□□□ 0.64
SREK1-212ENST00000522912 CD44P16070 742 aaKnown RBP19.03■□□□□ 0.64
SREK1-212ENST00000522912 RASSF8Q8NHQ8 419 aa19.03■□□□□ 0.64
SREK1-212ENST00000522912 XPO4Q9C0E2 1151 aaKnown RBP19.03■□□□□ 0.64
SREK1-212ENST00000522912 FANCLQ9NW38 375 aa19.03■□□□□ 0.64
SREK1-212ENST00000522912 OPLAHO14841 1288 aa19.02■□□□□ 0.64
SREK1-212ENST00000522912 FXR2P51116 673 aaKnown RBP eCLIP19.02■□□□□ 0.645e-7■■□□□ 12.1
SREK1-212ENST00000522912 FANCCQ00597 558 aa19.02■□□□□ 0.64
SREK1-212ENST00000522912 KIF4BQ2VIQ3 1234 aa19.02■□□□□ 0.64
SREK1-212ENST00000522912 ANO3Q9BYT9 981 aa19.02■□□□□ 0.64
SREK1-212ENST00000522912 DDX25Q9UHL0 483 aaKnown RBP19.02■□□□□ 0.64
SREK1-212ENST00000522912 DICER1Q9UPY3 1922 aaKnown RBP19.02■□□□□ 0.64
SREK1-212ENST00000522912 PLCG1P19174 1290 aa19.01■□□□□ 0.63
SREK1-212ENST00000522912 TRMT44Q8IYL2 757 aaKnown RBP19.01■□□□□ 0.63
SREK1-212ENST00000522912 ENOX1Q8TC92 643 aaKnown RBP19.01■□□□□ 0.63
SREK1-212ENST00000522912 SH2D4AQ9H788 454 aa19.01■□□□□ 0.63
SREK1-212ENST00000522912 PPP1R3GB7ZBB8 358 aa19.01■□□□□ 0.63
SREK1-212ENST00000522912 SMYD4Q8IYR2 804 aaPredicted RBP19.01■□□□□ 0.63
SREK1-212ENST00000522912 HAS1Q92839 578 aa19.01■□□□□ 0.63
SREK1-212ENST00000522912 DEFB129Q9H1M3 183 aa19.01■□□□□ 0.63
SREK1-212ENST00000522912 KBTBD4Q9NVX7 518 aa19.01■□□□□ 0.63
SREK1-212ENST00000522912 GCFC2P16383 781 aaKnown RBP19■□□□□ 0.63
SREK1-212ENST00000522912 ERCC5P28715 1186 aaPredicted RBP19■□□□□ 0.63
SREK1-212ENST00000522912 AP3B2Q13367 1082 aa19■□□□□ 0.63
SREK1-212ENST00000522912 CHURC1Q8WUH1 139 aa19■□□□□ 0.63
SREK1-212ENST00000522912 CRYGNQ8WXF5 182 aa19■□□□□ 0.63
SREK1-212ENST00000522912 PLA2G6O60733 806 aa19■□□□□ 0.63
SREK1-212ENST00000522912 RPN1P04843 607 aaKnown RBP19■□□□□ 0.63
SREK1-212ENST00000522912 USP11P51784 963 aa19■□□□□ 0.63
SREK1-212ENST00000522912 CT47A1Q5JQC4 288 aaPredicted RBP19■□□□□ 0.63
SREK1-212ENST00000522912 ZNF341Q9BYN7 854 aa19■□□□□ 0.63
SREK1-212ENST00000522912 RANBP17Q9H2T7 1088 aaKnown RBP19■□□□□ 0.63
SREK1-212ENST00000522912 LRWD1Q9UFC0 647 aa19■□□□□ 0.63
SREK1-212ENST00000522912 NFE2L3Q9Y4A8 694 aa19■□□□□ 0.63
SREK1-212ENST00000522912 SBF1O95248 1867 aa18.99■□□□□ 0.63
SREK1-212ENST00000522912 UTRNP46939 3433 aa18.99■□□□□ 0.63
SREK1-212ENST00000522912 PDIA5Q14554 519 aa18.99■□□□□ 0.63
SREK1-212ENST00000522912 TMEM266Q2M3C6 531 aa18.99■□□□□ 0.63
SREK1-212ENST00000522912 NBPF12Q5TAG4 269 aaPredicted RBP18.99■□□□□ 0.63
SREK1-212ENST00000522912 GJA10Q969M2 543 aa18.99■□□□□ 0.63
SREK1-212ENST00000522912 KIFC2Q96AC6 838 aa18.99■□□□□ 0.63
SREK1-212ENST00000522912 CUEDC2Q9H467 287 aa18.99■□□□□ 0.63
SREK1-212ENST00000522912 FBXO28Q9NVF7 368 aa18.99■□□□□ 0.63
SREK1-212ENST00000522912 PYCARDQ9ULZ3 195 aa18.99■□□□□ 0.63
SREK1-212ENST00000522912 CYP3A7-CYP3A51PA0A087WV96 503 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 POTEMA6NI47 508 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 ZNF18P17022 549 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 CYP3A7P24462 503 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 LRMPQ12912 555 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 KLHL10Q6JEL2 608 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 CCDC174Q6PII3 467 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 ARHGAP27Q6ZUM4 889 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 MBOAT7Q96N66 472 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 NAP1L4Q99733 375 aaKnown RBP18.98■□□□□ 0.63
SREK1-212ENST00000522912 H7C1D1 291 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 GRB10Q13322 594 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 MCTP2Q6DN12 878 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 FAM160B2Q86V87 743 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 CACTINQ8WUQ7 758 aaKnown RBP18.98■□□□□ 0.63
SREK1-212ENST00000522912 PNMA5Q96PV4 448 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 FEM1BQ9UK73 627 aa18.98■□□□□ 0.63
SREK1-212ENST00000522912 KLRC4O43908 158 aa18.97■□□□□ 0.63
SREK1-212ENST00000522912 CTNND1O60716 968 aaKnown RBP18.97■□□□□ 0.63
SREK1-212ENST00000522912 HOXA13P31271 388 aaPredicted RBP18.97■□□□□ 0.63
SREK1-212ENST00000522912 ARHGAP4P98171 946 aa18.97■□□□□ 0.63
SREK1-212ENST00000522912 ARID5BQ14865 1188 aa18.97■□□□□ 0.63
SREK1-212ENST00000522912 HSP90AA4PQ58FG1 418 aa18.97■□□□□ 0.63
SREK1-212ENST00000522912 TRPM4Q8TD43 1214 aa18.97■□□□□ 0.63
SREK1-212ENST00000522912 CALML4Q96GE6 196 aa18.97■□□□□ 0.63
SREK1-212ENST00000522912 FEZ1Q99689 392 aa18.97■□□□□ 0.63
SREK1-212ENST00000522912 NUDT12Q9BQG2 462 aa18.97■□□□□ 0.63
SREK1-212ENST00000522912 MAGEF1Q9HAY2 307 aa18.97■□□□□ 0.63
SREK1-212ENST00000522912 SPON1Q9HCB6 807 aa18.97■□□□□ 0.63
SREK1-212ENST00000522912 SERPINC1P01008 464 aa18.96■□□□□ 0.63
SREK1-212ENST00000522912 FOSP01100 380 aaPredicted RBP18.96■□□□□ 0.63
SREK1-212ENST00000522912 MYL1P05976 194 aa18.96■□□□□ 0.63
SREK1-212ENST00000522912 INPP5BP32019 993 aa18.96■□□□□ 0.63
SREK1-212ENST00000522912 STX17P56962 302 aa18.96■□□□□ 0.63
SREK1-212ENST00000522912 UBASH3AP57075 661 aa18.96■□□□□ 0.63
SREK1-212ENST00000522912 ZNF658Q5TYW1 1059 aaPredicted RBP18.96■□□□□ 0.63
SREK1-212ENST00000522912 FILIP1Q7Z7B0 1213 aa18.96■□□□□ 0.63
SREK1-212ENST00000522912 C17orf53Q8N3J3 647 aaPredicted RBP18.96■□□□□ 0.63
SREK1-212ENST00000522912 NAP1L5Q96NT1 182 aaPredicted RBP18.96■□□□□ 0.63
SREK1-212ENST00000522912 KCNMB3Q9NPA1 279 aa18.96■□□□□ 0.63
SREK1-212ENST00000522912 SAMSN1Q9NSI8 373 aaKnown RBP18.96■□□□□ 0.63
SREK1-212ENST00000522912 RMND1Q9NWS8 449 aa18.96■□□□□ 0.63
SREK1-212ENST00000522912 PIK3CDO00329 1044 aa18.96■□□□□ 0.63
SREK1-212ENST00000522912 SREBF1P36956 1147 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms