RNA–Protein interactions for RNA: ENST00000520828.5

PTK2-223, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-223	ENST00000520828	GPHN	Q9NQX3	736 aa	Predicted RBP	9.64	□□□□□ -0.87
PTK2-223	ENST00000520828	RNF146	Q9NTX7	359 aa		9.64	□□□□□ -0.87
PTK2-223	ENST00000520828	CLIP2	Q9UDT6	1046 aa		9.64	□□□□□ -0.87
PTK2-223	ENST00000520828	MTUS1	Q9ULD2	1270 aa		9.64	□□□□□ -0.87
PTK2-223	ENST00000520828	EXOC6B	Q9Y2D4	811 aa		9.64	□□□□□ -0.87
PTK2-223	ENST00000520828	SLC4A4	Q9Y6R1	1079 aa		9.64	□□□□□ -0.87
PTK2-223	ENST00000520828	COL4A4	P53420	1690 aa	Predicted RBP	9.64	□□□□□ -0.87
PTK2-223	ENST00000520828	MCM3AP	O60318	1980 aa		9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	ADD2	P35612	726 aa		9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	PURA	Q00577	322 aa	Known RBP	9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	TKFC	Q3LXA3	575 aa		9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	SLFNL1	Q499Z3	407 aa		9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	DUSP28	Q4G0W2	176 aa		9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	BRDT	Q58F21	947 aa	Predicted RBP	9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	TMEM63B	Q5T3F8	832 aa		9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	ASTL	Q6HA08	431 aa	Predicted RBP	9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	TRERF1	Q96PN7	1200 aa		9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	TGS1	Q96RS0	853 aa	Known RBP	9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	SUGCT	Q9HAC7	445 aa		9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	IL1RAPL2	Q9NP60	686 aa		9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	ARPP21	Q9UBL0	812 aa	Predicted RBP	9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	ISY1	Q9ULR0	285 aa	Known RBP	9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	NOD1	Q9Y239	953 aa		9.63	□□□□□ -0.87
PTK2-223	ENST00000520828	ZBED9	Q6R2W3	1325 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	GRXCR2	A6NFK2	248 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	IFIT2	P09913	472 aa	Known RBP	9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	BMP3	P12645	472 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	ALAS1	P13196	640 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	RASA1	P20936	1047 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	ERVK-21	P61565	698 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	WDR5	P61964	334 aa	Known RBP	9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	LRRFIP1	Q32MZ4	808 aa	Known RBP	9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	NBPF20	Q3BBV1	942 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	HSP90AB4P	Q58FF6	505 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	ZKSCAN2	Q63HK3	967 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	SLFN13	Q68D06	897 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	NFRKB	Q6P4R8	1299 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	RPAP2	Q8IXW5	612 aa	Predicted RBP	9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	STK11IP	Q8N1F8	1099 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	CCDC155	Q8N6L0	562 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	GMCL1P1	Q8NEA9	526 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	MFSD14A	Q96MC6	490 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	CRBN	Q96SW2	442 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	RAD9A	Q99638	391 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	PAG1	Q9NWQ8	432 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	SYNPO2	Q9UMS6	1093 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	FAM50B	Q9Y247	325 aa		9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	DDX49	Q9Y6V7	483 aa	Known RBP	9.62	□□□□□ -0.87
PTK2-223	ENST00000520828	RAD50	Q92878	1312 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	BAZ2A	Q9UIF9	1905 aa	Known RBP	9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	POTEB3	A0JP26	581 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	LINC01553	A4QN01	128 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	TMEM232	C9JQI7	657 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	KPNA6	O60684	536 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	TTLL1	O95922	423 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	STAT2	P52630	851 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	PTPN11	Q06124	597 aa	Predicted RBP	9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	IK	Q13123	557 aa	Predicted RBP	9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	UBE3C	Q15386	1083 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	POTEB	Q6S5H4	581 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	TMCO2	Q7Z6W1	182 aa	Predicted RBP	9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	LRRC47	Q8N1G4	583 aa	Known RBP	9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	CLASRP	Q8N2M8	674 aa	Known RBP	9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	OR6J1	Q8NGC5	347 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	CHURC1	Q8WUH1	139 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	MKL1	Q969V6	931 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	WDR11	Q9BZH6	1224 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	UPF3B	Q9BZI7	483 aa	Known RBP	9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	CYP39A1	Q9NYL5	469 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	PRKAG3	Q9UGI9	489 aa		9.61	□□□□□ -0.87
PTK2-223	ENST00000520828	SCN5A	Q14524	2016 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	IGKV6D-41	A0A0C4DH26	115 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	MINDY4B	A8MYZ0	360 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828		H3BQ06	376 aa	Predicted RBP	9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	ST18	O60284	1047 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	GJB5	O95377	273 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	DEFB103A	P81534	67 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	SBK1	Q52WX2	424 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	ZSCAN25	Q6NSZ9	544 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	CEP85	Q6P2H3	762 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	CNKSR3	Q6P9H4	555 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	NSMF	Q6X4W1	530 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	HFE2	Q6ZVN8	426 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	FAM160B2	Q86V87	743 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	ITPRIP	Q8IWB1	547 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	FTSJ3	Q8IY81	847 aa	Known RBP	9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	ZNF444	Q8N0Y2	327 aa	Predicted RBP	9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	FBXO22	Q8NEZ5	403 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	CAGE1	Q8TC20	777 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	RHPN1	Q8TCX5	695 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	NEK9	Q8TD19	979 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	MORC4	Q8TE76	937 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	AFAP1L1	Q8TED9	768 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	PPP1R13L	Q8WUF5	828 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	STAG1	Q8WVM7	1258 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	CEP95	Q96GE4	821 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	BCL11A	Q9H165	835 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	ZNF287	Q9HBT7	754 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	MTMR4	Q9NYA4	1195 aa		9.6	□□□□□ -0.87
PTK2-223	ENST00000520828	ADD3	Q9UEY8	706 aa	Known RBP	9.6	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms