RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-208	ENST00000520580	MS4A5	Q9H3V2	200 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	LGR6	Q9HBX8	967 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	LAS1L	Q9Y4W2	734 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	WASHC2A	Q641Q2	1341 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PTPDC1	A2A3K4	754 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	TBX3	O15119	743 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PCDHGA12	O60330	932 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	MSC	O60682	206 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	LRRN2	O75325	713 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	CST3	P01034	146 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	THBD	P07204	575 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	CYP2C19	P33261	490 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	DNM2	P50570	870 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	RBM10	P98175	930 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	ZNF267	Q14586	743 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PLA2G4E	Q3MJ16	856 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	EXOSC6	Q5RKV6	272 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	BROX	Q5VW32	411 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	C20orf204	Q6ZNR8	217 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	ARMCX6	Q7L4S7	300 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	NME8	Q8N427	588 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	CISD2	Q8N5K1	135 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	ANKRD42	Q8N9B4	389 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	DCAF4	Q8WV16	495 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	MIPEP	Q99797	713 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PIDD1	Q9HB75	910 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	TMEFF2	Q9UIK5	374 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PCDHGA8	Q9Y5G5	932 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PCDHGA7	Q9Y5G6	932 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PCDHGA6	Q9Y5G7	932 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PCDHGA3	Q9Y5H0	932 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580	PCDHGA2	Q9Y5H1	932 aa		4.58	□□□□□ -1.68
SREK1-208	ENST00000520580		H0Y8X5	98 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	PIP5K1C	O60331	668 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	EIF4EBP3	O60516	100 aa	Predicted RBP	4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	KRT37	O76014	449 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	LCP1	P13796	627 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	CD53	P19397	219 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	LPO	P22079	712 aa	Predicted RBP	4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	ACAP2	Q15057	778 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	TMEM177	Q53S58	311 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	XRRA1	Q6P2D8	792 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	C1orf228	Q6PIY5	440 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	ENAH	Q8N8S7	591 aa	Predicted RBP	4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	VWCE	Q96DN2	955 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	STRBP	Q96SI9	672 aa	Known RBP	4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	ELAC2	Q9BQ52	826 aa	Known RBP	4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	MCMBP	Q9BTE3	642 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	SLC13A1	Q9BZW2	595 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	FOXQ1	Q9C009	403 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	MAN1C1	Q9NR34	630 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	GIT1	Q9Y2X7	761 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	LCHN	A4D1U4	455 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	AP1G1	O43747	822 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	TCEA3	O75764	348 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	CP	P00450	1065 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	PPM1F	P49593	454 aa	Predicted RBP	4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	ADCY1	Q08828	1119 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	DUOXA2	Q1HG44	320 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	CLEC4G	Q6UXB4	293 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	TMC3	Q7Z5M5	1100 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	ANKLE2	Q86XL3	938 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	KREMEN2	Q8NCW0	462 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	TGFBRAP1	Q8WUH2	860 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	TCF7L1	Q9HCS4	588 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	PLCB1	Q9NQ66	1216 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	FAM105A	Q9NUU6	356 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	CEP131	Q9UPN4	1083 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	MRFAP1	Q9Y605	127 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	FHOD1	Q9Y613	1164 aa		4.57	□□□□□ -1.68
SREK1-208	ENST00000520580	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	KRBA1	A5PL33	1030 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	ARNTL	O00327	626 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	ULK1	O75385	1050 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	WISP1	O95388	367 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	SCG5	P05408	212 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	CD3E	P07766	207 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	U2AF1L5	P0DN76	240 aa	Predicted RBP	4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	ADH5	P11766	374 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	LSS	P48449	732 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	U2AF1	Q01081	240 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	CHAF1A	Q13111	956 aa	Predicted RBP	4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	STK3	Q13188	491 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	GTF2H3	Q13889	308 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	GAS6	Q14393	721 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	GBX1	Q14549	363 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	LLGL1	Q15334	1064 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	IFIT1B	Q5T764	474 aa	Known RBP	4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	NUTM2G	Q5VZR2	741 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	LETMD1	Q6P1Q0	360 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	SV2A	Q7L0J3	742 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	CATIP	Q7Z7H3	387 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	SRL	Q86TD4	932 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	CCDC103	Q8IW40	242 aa		4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	CMTR2	Q8IYT2	770 aa	Known RBP	4.56	□□□□□ -1.68
SREK1-208	ENST00000520580	KCT2	Q8NC54	265 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms