RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 PFDN2Q9UHV9 154 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 KIF24Q5T7B8 1368 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 KIAA0232Q92628 1395 aa9.11□□□□□ -0.95
RFC1-213ENST00000512275 ABCC6O95255 1503 aa9.1□□□□□ -0.95
RFC1-213ENST00000512275 CAMTA1Q9Y6Y1 1673 aa9.1□□□□□ -0.95
RFC1-213ENST00000512275 COL14A1Q05707 1796 aaKnown RBP9.1□□□□□ -0.95
RFC1-213ENST00000512275 CST3P01034 146 aaPredicted RBP9.1□□□□□ -0.95
RFC1-213ENST00000512275 HMOX1P09601 288 aa9.1□□□□□ -0.95
RFC1-213ENST00000512275 HCLS1P14317 486 aaPredicted RBP9.1□□□□□ -0.95
RFC1-213ENST00000512275 TRIM28Q13263 835 aaKnown RBP9.1□□□□□ -0.95
RFC1-213ENST00000512275 ARHGEF25Q86VW2 580 aa9.1□□□□□ -0.95
RFC1-213ENST00000512275 C2CD4AQ8NCU7 369 aaPredicted RBP9.1□□□□□ -0.95
RFC1-213ENST00000512275 CYB5D2Q8WUJ1 264 aa9.1□□□□□ -0.95
RFC1-213ENST00000512275 LRRC59Q96AG4 307 aaKnown RBP9.1□□□□□ -0.95
RFC1-213ENST00000512275 KIF2CQ99661 725 aa9.1□□□□□ -0.95
RFC1-213ENST00000512275 DPH2Q9BQC3 489 aaPredicted RBP9.1□□□□□ -0.95
RFC1-213ENST00000512275 SUCOQ9UBS9 1254 aaKnown RBP9.1□□□□□ -0.95
RFC1-213ENST00000512275 PTCH2Q9Y6C5 1203 aa9.1□□□□□ -0.95
RFC1-213ENST00000512275 DRD2P14416 443 aa9.09□□□□□ -0.95
RFC1-213ENST00000512275 CHRNA2Q15822 529 aa9.09□□□□□ -0.95
RFC1-213ENST00000512275 BBS9Q3SYG4 887 aa9.09□□□□□ -0.95
RFC1-213ENST00000512275 PRAMEF13Q5VWM6 474 aa9.09□□□□□ -0.95
RFC1-213ENST00000512275 C16orf86Q6ZW13 317 aa9.09□□□□□ -0.95
RFC1-213ENST00000512275 PHACTR4Q8IZ21 702 aa9.09□□□□□ -0.95
RFC1-213ENST00000512275 TMEM130Q8N3G9 435 aa9.09□□□□□ -0.95
RFC1-213ENST00000512275 IP6K1Q92551 441 aa9.09□□□□□ -0.95
RFC1-213ENST00000512275 SLC6A18Q96N87 628 aa9.09□□□□□ -0.95
RFC1-213ENST00000512275 FAM105AQ9NUU6 356 aa9.09□□□□□ -0.95
RFC1-213ENST00000512275 SUSD2Q9UGT4 822 aa9.09□□□□□ -0.95
RFC1-213ENST00000512275 ACTL7BQ9Y614 415 aa9.09□□□□□ -0.95
RFC1-213ENST00000512275 VIRMAQ69YN4 1812 aaKnown RBP9.09□□□□□ -0.95
RFC1-213ENST00000512275 F8W735 103 aaPredicted RBP9.08□□□□□ -0.96
RFC1-213ENST00000512275 ADCY3O60266 1144 aa9.08□□□□□ -0.96
RFC1-213ENST00000512275 RSPO4Q2I0M5 234 aaPredicted RBP9.08□□□□□ -0.96
RFC1-213ENST00000512275 GNPTABQ3T906 1256 aa9.08□□□□□ -0.96
RFC1-213ENST00000512275 ANKRD34AQ69YU3 496 aa9.08□□□□□ -0.96
RFC1-213ENST00000512275 DHRS1Q96LJ7 313 aa9.08□□□□□ -0.96
RFC1-213ENST00000512275 CCDC74BQ96LY2 380 aa9.08□□□□□ -0.96
RFC1-213ENST00000512275 CPDO75976 1380 aa9.08□□□□□ -0.96
RFC1-213ENST00000512275 ZBED9Q6R2W3 1325 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 MAPK8IP3Q9UPT6 1336 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 KRTAP9-6A0A140TA67 174 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 APAF1O14727 1248 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 CENPBP07199 599 aaPredicted RBP9.07□□□□□ -0.96
RFC1-213ENST00000512275 PRKAR2BP31323 418 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 GRIK4Q16099 956 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 LONRF2Q1L5Z9 754 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 Q6ZS46 218 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 CDC37L1Q7L3B6 337 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 DYMQ7RTS9 669 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 USHBP1Q8N6Y0 703 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 RUNDC1Q96C34 613 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 NACC1Q96RE7 527 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 FEZ1Q99689 392 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 SPATA9Q9BWV2 254 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 BRINP2Q9C0B6 783 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 PRDM11Q9NQV5 511 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 TPSG1Q9NRR2 321 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 RRP7AQ9Y3A4 280 aaKnown RBP9.07□□□□□ -0.96
RFC1-213ENST00000512275 NRAPQ86VF7 1730 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 WNK3Q9BYP7 1800 aa9.07□□□□□ -0.96
RFC1-213ENST00000512275 IGSF1Q8N6C5 1336 aa9.06□□□□□ -0.96
RFC1-213ENST00000512275 ASPAP45381 313 aa9.06□□□□□ -0.96
RFC1-213ENST00000512275 ZNF143P52747 638 aaPredicted RBP9.06□□□□□ -0.96
RFC1-213ENST00000512275 PTPROQ16827 1216 aa9.06□□□□□ -0.96
RFC1-213ENST00000512275 TKFCQ3LXA3 575 aa9.06□□□□□ -0.96
RFC1-213ENST00000512275 RNF187Q5TA31 235 aaPredicted RBP9.06□□□□□ -0.96
RFC1-213ENST00000512275 SULT6B1Q6IMI4 303 aa9.06□□□□□ -0.96
RFC1-213ENST00000512275 FDX2Q6P4F2 183 aa9.06□□□□□ -0.96
RFC1-213ENST00000512275 SMYD4Q8IYR2 804 aaPredicted RBP9.06□□□□□ -0.96
RFC1-213ENST00000512275 C12orf50Q8NA57 414 aaPredicted RBP9.06□□□□□ -0.96
RFC1-213ENST00000512275 BAHD1Q8TBE0 780 aaPredicted RBP9.06□□□□□ -0.96
RFC1-213ENST00000512275 PPP1R13LQ8WUF5 828 aa9.06□□□□□ -0.96
RFC1-213ENST00000512275 PSMG3-AS1Q96PY0 264 aa9.06□□□□□ -0.96
RFC1-213ENST00000512275 PIDD1Q9HB75 910 aa9.06□□□□□ -0.96
RFC1-213ENST00000512275 PRKAB1Q9Y478 270 aa9.06□□□□□ -0.96
RFC1-213ENST00000512275 COL5A2P05997 1499 aaPredicted RBP9.05□□□□□ -0.96
RFC1-213ENST00000512275 C9IYK1 514 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 FAM153BP0C7A2 387 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 TMEM67Q5HYA8 995 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 NKAPLQ5M9Q1 402 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 SHISA2Q6UWI4 295 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 ARMCX6Q7L4S7 300 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 LRRC47Q8N1G4 583 aaKnown RBP9.05□□□□□ -0.96
RFC1-213ENST00000512275 AGGF1Q8N302 714 aaeCLIP9.05□□□□□ -0.96
RFC1-213ENST00000512275 TCP11L2Q8N4U5 519 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 ZSWIM2Q8NEG5 633 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 SMARCC1Q92922 1105 aaPredicted RBP9.05□□□□□ -0.96
RFC1-213ENST00000512275 SGSM3Q96HU1 749 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 FOXQ1Q9C009 403 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.05□□□□□ -0.96
RFC1-213ENST00000512275 TMX1Q9H3N1 280 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 ACSS3Q9H6R3 686 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 PARP4Q9UKK3 1724 aaKnown RBP9.05□□□□□ -0.96
RFC1-213ENST00000512275 NWD2Q9ULI1 1742 aa9.05□□□□□ -0.96
RFC1-213ENST00000512275 KDRP35968 1356 aa9.04□□□□□ -0.96
RFC1-213ENST00000512275 JCADQ9P266 1359 aa9.04□□□□□ -0.96
RFC1-213ENST00000512275 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.04□□□□□ -0.96
RFC1-213ENST00000512275 CBFA2T2O43439 604 aa9.04□□□□□ -0.96
RFC1-213ENST00000512275 LRIG2O94898 1065 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms