RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 TRBV23-1A0A0A0MS06 115 aa8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 MEFVO15553 781 aaPredicted RBP8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 SUMO1P63165 101 aaKnown RBP8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 TMEM67Q5HYA8 995 aa8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 MBLAC2Q68D91 279 aa8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 JAMLQ86YT9 394 aa8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 CCDC103Q8IW40 242 aa8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 PPIL6Q8IXY8 311 aa8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 KISS1RQ969F8 398 aaPredicted RBP8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 RNF32Q9H0A6 362 aa8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 CRTAC1Q9NQ79 661 aa8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 IMPACTQ9P2X3 320 aa8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 TMEFF2Q9UIK5 374 aaPredicted RBP8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 GPR160Q9UJ42 338 aa8.85□□□□□ -0.99
UBE2D3-217ENST00000504211 LTBRP36941 435 aa8.84□□□□□ -0.99
UBE2D3-217ENST00000504211 NTRK3Q16288 839 aa8.84□□□□□ -0.99
UBE2D3-217ENST00000504211 FAM209AQ5JX71 171 aa8.84□□□□□ -0.99
UBE2D3-217ENST00000504211 SH3TC2Q8TF17 1288 aa8.84□□□□□ -0.99
UBE2D3-217ENST00000504211 DIO2Q92813 273 aa8.84□□□□□ -0.99
UBE2D3-217ENST00000504211 RNPC3Q96LT9 517 aaKnown RBP8.84□□□□□ -0.99
UBE2D3-217ENST00000504211 CDC6Q99741 560 aa8.84□□□□□ -0.99
UBE2D3-217ENST00000504211 CCDC163A0A0D9SF12 145 aa8.83□□□□□ -1
UBE2D3-217ENST00000504211 C7orf72A4D263 438 aa8.83□□□□□ -1
UBE2D3-217ENST00000504211 GLI1P08151 1106 aa8.83□□□□□ -1
UBE2D3-217ENST00000504211 SQSTM1Q13501 440 aa8.83□□□□□ -1
UBE2D3-217ENST00000504211 INF2Q27J81 1249 aa8.83□□□□□ -1
UBE2D3-217ENST00000504211 JAZF1Q86VZ6 243 aa8.83□□□□□ -1
UBE2D3-217ENST00000504211 CPNE8Q86YQ8 564 aa8.83□□□□□ -1
UBE2D3-217ENST00000504211 DHRS4Q9BTZ2 278 aa8.83□□□□□ -1
UBE2D3-217ENST00000504211 KANSL2Q9H9L4 492 aa8.83□□□□□ -1
UBE2D3-217ENST00000504211 TMEM260Q9NX78 707 aa8.83□□□□□ -1
UBE2D3-217ENST00000504211 YBX2Q9Y2T7 364 aaKnown RBP8.83□□□□□ -1
UBE2D3-217ENST00000504211 MRPS23Q9Y3D9 190 aaKnown RBP8.83□□□□□ -1
UBE2D3-217ENST00000504211 CARMIL2Q6F5E8 1435 aa8.82□□□□□ -1
UBE2D3-217ENST00000504211 NPHS1O60500 1241 aa8.82□□□□□ -1
UBE2D3-217ENST00000504211 C6orf222P0C671 652 aaPredicted RBP8.82□□□□□ -1
UBE2D3-217ENST00000504211 PNLIPP16233 465 aa8.82□□□□□ -1
UBE2D3-217ENST00000504211 MVKQ03426 396 aa8.82□□□□□ -1
UBE2D3-217ENST00000504211 KCNMB1Q16558 191 aa8.82□□□□□ -1
UBE2D3-217ENST00000504211 RSPO2Q6UXX9 243 aaPredicted RBP8.82□□□□□ -1
UBE2D3-217ENST00000504211 NUP43Q8NFH3 380 aa8.82□□□□□ -1
UBE2D3-217ENST00000504211 FAM168AQ92567 244 aa8.82□□□□□ -1
UBE2D3-217ENST00000504211 IPO9Q96P70 1041 aaKnown RBP8.82□□□□□ -1
UBE2D3-217ENST00000504211 TBX22Q9Y458 520 aa8.82□□□□□ -1
UBE2D3-217ENST00000504211 PRKCAP17252 672 aa8.81□□□□□ -1
UBE2D3-217ENST00000504211 TAL1P17542 331 aaPredicted RBP8.81□□□□□ -1
UBE2D3-217ENST00000504211 KIR3DS1Q14943 382 aa8.81□□□□□ -1
UBE2D3-217ENST00000504211 MCTP1Q6DN14 999 aa8.81□□□□□ -1
UBE2D3-217ENST00000504211 STYK1Q6J9G0 422 aa8.81□□□□□ -1
UBE2D3-217ENST00000504211 USP53Q70EK8 1073 aa8.81□□□□□ -1
UBE2D3-217ENST00000504211 RCBTB1Q8NDN9 531 aa8.81□□□□□ -1
UBE2D3-217ENST00000504211 DCAF4Q8WV16 495 aa8.81□□□□□ -1
UBE2D3-217ENST00000504211 PDLIM7Q9NR12 457 aa8.81□□□□□ -1
UBE2D3-217ENST00000504211 GPR27Q9NS67 375 aa8.81□□□□□ -1
UBE2D3-217ENST00000504211 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.8□□□□□ -1
UBE2D3-217ENST00000504211 MSL3P1P0C860 447 aa8.8□□□□□ -1
UBE2D3-217ENST00000504211 Q8N1Y9 231 aa8.8□□□□□ -1
UBE2D3-217ENST00000504211 ZFYVE21Q9BQ24 234 aa8.8□□□□□ -1
UBE2D3-217ENST00000504211 MTA3Q9BTC8 594 aa8.8□□□□□ -1
UBE2D3-217ENST00000504211 MRPL42Q9Y6G3 142 aaKnown RBP8.8□□□□□ -1
UBE2D3-217ENST00000504211 ZNF503-AS2A6NEH8 195 aa8.79□□□□□ -1
UBE2D3-217ENST00000504211 GIMAP6Q6P9H5 292 aa8.79□□□□□ -1
UBE2D3-217ENST00000504211 DPF3Q92784 378 aa8.79□□□□□ -1
UBE2D3-217ENST00000504211 INTS4Q96HW7 963 aaKnown RBP8.79□□□□□ -1
UBE2D3-217ENST00000504211 SLC6A17Q9H1V8 727 aa8.79□□□□□ -1
UBE2D3-217ENST00000504211 TNFRSF12AQ9NP84 129 aa8.79□□□□□ -1
UBE2D3-217ENST00000504211 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.79□□□□□ -1
UBE2D3-217ENST00000504211 PPP1R11O60927 126 aaPredicted RBP8.78□□□□□ -1
UBE2D3-217ENST00000504211 LCP1P13796 627 aa8.78□□□□□ -1
UBE2D3-217ENST00000504211 GALK1P51570 392 aa8.78□□□□□ -1
UBE2D3-217ENST00000504211 GTF2A2P52657 109 aa8.78□□□□□ -1
UBE2D3-217ENST00000504211 ERVFRD-1P60508 538 aa8.78□□□□□ -1
UBE2D3-217ENST00000504211 RPL11P62913 178 aaKnown RBP8.78□□□□□ -1
UBE2D3-217ENST00000504211 CYP4F8P98187 520 aa8.78□□□□□ -1
UBE2D3-217ENST00000504211 MAMDC2Q7Z304 686 aaPredicted RBP8.78□□□□□ -1
UBE2D3-217ENST00000504211 IRF2BP1Q8IU81 584 aa8.78□□□□□ -1
UBE2D3-217ENST00000504211 PTPRN2Q92932 1015 aa8.78□□□□□ -1
UBE2D3-217ENST00000504211 PHF20Q9BVI0 1012 aa8.78□□□□□ -1
UBE2D3-217ENST00000504211 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.78□□□□□ -15e-8■■■□□ 16.6
UBE2D3-217ENST00000504211 GULP1Q9UBP9 304 aa8.78□□□□□ -1
UBE2D3-217ENST00000504211 TIMM13Q9Y5L4 95 aaPredicted RBP8.78□□□□□ -1
UBE2D3-217ENST00000504211 A0A1W2PQ27 194 aa8.77□□□□□ -1.01
UBE2D3-217ENST00000504211 A0A1W2PQ64 194 aa8.77□□□□□ -1.01
UBE2D3-217ENST00000504211 A0A1W2PQC6 194 aa8.77□□□□□ -1.01
UBE2D3-217ENST00000504211 A0A1W2PQD8 194 aa8.77□□□□□ -1.01
UBE2D3-217ENST00000504211 ESYT3A0FGR9 886 aa8.77□□□□□ -1.01
UBE2D3-217ENST00000504211 BLACEA4D250 179 aa8.77□□□□□ -1.01
UBE2D3-217ENST00000504211 MYO1BO43795 1136 aa8.77□□□□□ -1.01
UBE2D3-217ENST00000504211 ARL4AP40617 200 aa8.77□□□□□ -1.01
UBE2D3-217ENST00000504211 GABREP78334 506 aa8.77□□□□□ -1.01
UBE2D3-217ENST00000504211 TRIM61Q5EBN2 209 aa8.77□□□□□ -1.01
UBE2D3-217ENST00000504211 TLDC2A0PJX2 215 aa8.76□□□□□ -1.01
UBE2D3-217ENST00000504211 ENPP3O14638 875 aa8.76□□□□□ -1.01
UBE2D3-217ENST00000504211 SRGAP3O43295 1099 aa8.76□□□□□ -1.01
UBE2D3-217ENST00000504211 GPR85P60893 370 aa8.76□□□□□ -1.01
UBE2D3-217ENST00000504211 KCNT2Q6UVM3 1135 aa8.76□□□□□ -1.01
UBE2D3-217ENST00000504211 NLRP10Q86W26 655 aa8.76□□□□□ -1.01
UBE2D3-217ENST00000504211 SIRT2Q8IXJ6 389 aa8.76□□□□□ -1.01
UBE2D3-217ENST00000504211 NLGN1Q8N2Q7 840 aa8.76□□□□□ -1.01
UBE2D3-217ENST00000504211 SYNPOQ8N3V7 929 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms