RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 DYMQ7RTS9 669 aa20.77■□□□□ 0.92
SCARB2-203ENST00000502908 ANKRD13CQ8N6S4 541 aa20.77■□□□□ 0.92
SCARB2-203ENST00000502908 COG1Q8WTW3 980 aa20.77■□□□□ 0.92
SCARB2-203ENST00000502908 DHTKD1Q96HY7 919 aaPredicted RBP20.77■□□□□ 0.92
SCARB2-203ENST00000502908 CCDC42Q96M95 316 aa20.77■□□□□ 0.92
SCARB2-203ENST00000502908 SEMA6BQ9H3T3 888 aa20.77■□□□□ 0.92
SCARB2-203ENST00000502908 KLRF2D3W0D1 207 aa20.77■□□□□ 0.91
SCARB2-203ENST00000502908 MOCS3O95396 460 aa20.77■□□□□ 0.91
SCARB2-203ENST00000502908 OR52Z1P0C646 297 aa20.77■□□□□ 0.91
SCARB2-203ENST00000502908 SECISBP2LQ93073 1101 aaKnown RBP20.77■□□□□ 0.91
SCARB2-203ENST00000502908 SELENOOQ9BVL4 669 aa20.77■□□□□ 0.91
SCARB2-203ENST00000502908 ACBD3Q9H3P7 528 aa20.77■□□□□ 0.91
SCARB2-203ENST00000502908 MED4Q9NPJ6 270 aa20.77■□□□□ 0.91
SCARB2-203ENST00000502908 ZC3H4Q9UPT8 1303 aaKnown RBP20.76■□□□□ 0.91
SCARB2-203ENST00000502908 NUTM2BA6NNL0 878 aaPredicted RBP20.76■□□□□ 0.91
SCARB2-203ENST00000502908 NUTM2EB1AL46 878 aaPredicted RBP20.76■□□□□ 0.91
SCARB2-203ENST00000502908 EIF3CLB5ME19 914 aaKnown RBP20.76■□□□□ 0.91
SCARB2-203ENST00000502908 KIF5AQ12840 1032 aa20.76■□□□□ 0.91
SCARB2-203ENST00000502908 POTEDQ86YR6 584 aa20.76■□□□□ 0.91
SCARB2-203ENST00000502908 ZNF444Q8N0Y2 327 aaPredicted RBP20.76■□□□□ 0.91
SCARB2-203ENST00000502908 EIF3CQ99613 913 aaKnown RBP20.76■□□□□ 0.91
SCARB2-203ENST00000502908 TMEM260Q9NX78 707 aa20.76■□□□□ 0.91
SCARB2-203ENST00000502908 BIN2Q9UBW5 565 aaPredicted RBP20.76■□□□□ 0.91
SCARB2-203ENST00000502908 COL22A1Q8NFW1 1626 aaPredicted RBP20.76■□□□□ 0.91
SCARB2-203ENST00000502908 TXKP42681 527 aa20.76■□□□□ 0.91
SCARB2-203ENST00000502908 SLC7A5Q01650 507 aa20.76■□□□□ 0.91
SCARB2-203ENST00000502908 MSL3Q8N5Y2 521 aaKnown RBP20.76■□□□□ 0.91
SCARB2-203ENST00000502908 CCDC155Q8N6L0 562 aa20.76■□□□□ 0.91
SCARB2-203ENST00000502908 RABEP2Q9H5N1 569 aa20.76■□□□□ 0.91
SCARB2-203ENST00000502908 MKRN1Q9UHC7 482 aaKnown RBP20.76■□□□□ 0.91
SCARB2-203ENST00000502908 SMCO2A6NFE2 343 aa20.75■□□□□ 0.91
SCARB2-203ENST00000502908 PRPF6O94906 941 aaKnown RBP20.75■□□□□ 0.91
SCARB2-203ENST00000502908 AFAP1L1Q8TED9 768 aa20.75■□□□□ 0.91
SCARB2-203ENST00000502908 RRP36Q96EU6 259 aaKnown RBP20.75■□□□□ 0.91
SCARB2-203ENST00000502908 ARHGAP20Q9P2F6 1191 aa20.75■□□□□ 0.91
SCARB2-203ENST00000502908 TUBBP07437 444 aa20.75■□□□□ 0.91
SCARB2-203ENST00000502908 CKAP4Q07065 602 aaKnown RBP20.75■□□□□ 0.91
SCARB2-203ENST00000502908 MMTAG2Q9BU76 263 aaKnown RBP20.75■□□□□ 0.91
SCARB2-203ENST00000502908 RASSF4Q9H2L5 321 aa20.75■□□□□ 0.91
SCARB2-203ENST00000502908 MMRN2Q9H8L6 949 aa20.75■□□□□ 0.91
SCARB2-203ENST00000502908 COL14A1Q05707 1796 aaKnown RBP20.75■□□□□ 0.91
SCARB2-203ENST00000502908 NCK2O43639 380 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 VAV2P52735 878 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 NFRKBQ6P4R8 1299 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 EHBP1Q8NDI1 1231 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 GLIS3Q8NEA6 775 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 NLRP3Q96P20 1036 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 UIMC1Q96RL1 719 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 IFIH1Q9BYX4 1025 aaKnown RBP20.74■□□□□ 0.91
SCARB2-203ENST00000502908 BICDL2A1A5D9 508 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 AGPSO00116 658 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 SPA17Q15506 151 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 MAP9Q49MG5 647 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 CLEC4GQ6UXB4 293 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 PTF1AQ7RTS3 328 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 NBPF5PQ86XG9 351 aaPredicted RBP20.74■□□□□ 0.91
SCARB2-203ENST00000502908 GOLGA6L1Q8N7Z2 621 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 TBCKQ8TEA7 893 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 LRRC1Q9BTT6 524 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 NUP58Q9BVL2 599 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 UBA5Q9GZZ9 404 aa20.74■□□□□ 0.91
SCARB2-203ENST00000502908 DMGDHQ9UI17 866 aaKnown RBP20.74■□□□□ 0.91
SCARB2-203ENST00000502908 CCDC88AQ3V6T2 1871 aa20.73■□□□□ 0.91
SCARB2-203ENST00000502908 PALM3A6NDB9 673 aaPredicted RBP20.73■□□□□ 0.91
SCARB2-203ENST00000502908 LDHBP07195 334 aaKnown RBP20.73■□□□□ 0.91
SCARB2-203ENST00000502908 CCNI2Q6ZMN8 369 aaPredicted RBP20.73■□□□□ 0.91
SCARB2-203ENST00000502908 CREG2Q8IUH2 290 aa20.73■□□□□ 0.91
SCARB2-203ENST00000502908 CCDC170Q8IYT3 715 aa20.73■□□□□ 0.91
SCARB2-203ENST00000502908 CRACR2AQ9BSW2 395 aa20.73■□□□□ 0.91
SCARB2-203ENST00000502908 DEF6Q9H4E7 631 aa20.73■□□□□ 0.91
SCARB2-203ENST00000502908 EIF4A3P38919 411 aaKnown RBP20.73■□□□□ 0.91
SCARB2-203ENST00000502908 DNA2P51530 1060 aa20.73■□□□□ 0.91
SCARB2-203ENST00000502908 NONOQ15233 471 aaKnown RBP eCLIP20.73■□□□□ 0.91
SCARB2-203ENST00000502908 LRRC41Q15345 812 aa20.73■□□□□ 0.91
SCARB2-203ENST00000502908 DAGLBQ8NCG7 672 aa20.73■□□□□ 0.91
SCARB2-203ENST00000502908 NOC3LQ8WTT2 800 aaKnown RBP20.73■□□□□ 0.91
SCARB2-203ENST00000502908 MYL1P05976 194 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 IVLP07476 585 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 RASA1P20936 1047 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 AARSP49588 968 aaKnown RBP eCLIP20.72■□□□□ 0.91
SCARB2-203ENST00000502908 GNAQP50148 359 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 GJA10Q969M2 543 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 CCDC47Q96A33 483 aaKnown RBP20.72■□□□□ 0.91
SCARB2-203ENST00000502908 PURBQ96QR8 312 aaKnown RBP20.72■□□□□ 0.91
SCARB2-203ENST00000502908 PIGSQ96S52 555 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 ANKIB1Q9P2G1 1089 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 SALL4Q9UJQ4 1053 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 PCDHA13Q9Y5I0 950 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 RREB1Q92766 1687 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 KIF11P52732 1056 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 RRAGAQ7L523 313 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 SMARCC1Q92922 1105 aaPredicted RBP20.72■□□□□ 0.91
SCARB2-203ENST00000502908 C7orf25Q9BPX7 421 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 ZMYND12Q9H0C1 365 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 VIPAS39Q9H9C1 493 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 SNX12Q9UMY4 172 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 SPATA31A1Q5TZJ5 1347 aa20.72■□□□□ 0.91
SCARB2-203ENST00000502908 POTEMA6NI47 508 aa20.71■□□□□ 0.91
SCARB2-203ENST00000502908 MYMKA6NI61 221 aa20.71■□□□□ 0.91
SCARB2-203ENST00000502908 LRRC53A6NM62 1247 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms