RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 SHC4Q6S5L8 630 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 PBKQ96KB5 322 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 RUNDC3BQ96NL0 473 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 TULP4Q9NRJ4 1543 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 PGRMC1O00264 195 aaKnown RBP18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 CUL1Q13616 776 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 EEF2KMTQ96G04 330 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 TUBE1Q9UJT0 475 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 GAS8O95995 478 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 KIF11P52732 1056 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 EIF3BP55884 814 aaKnown RBP18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 PHLDB2Q86SQ0 1253 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 FUT8Q9BYC5 575 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 IL25Q9H293 177 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 GJA3Q9Y6H8 435 aa18.89■□□□□ 0.61
HMGXB3-201ENST00000502717 PCP11498 1178 aaKnown RBP18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 ADORA1P30542 326 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 ADD2P35612 726 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 MTF1Q14872 753 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 REXO1Q8N1G1 1221 aaKnown RBP18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 RUBCNQ92622 972 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 KIFAP3Q92845 792 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 TBC1D7Q9P0N9 293 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 INF2Q27J81 1249 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 ENGASEQ8NFI3 743 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 KLHL29Q96CT2 875 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 IRX2Q9BZI1 471 aaPredicted RBP18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 PUS7LQ9H0K6 701 aaKnown RBP18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 NOVA2Q9UNW9 492 aaKnown RBP18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 STK24Q9Y6E0 443 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 STK36Q9NRP7 1315 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 GLT8D2Q9H1C3 349 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 TMEM51Q9NW97 253 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 LGALS16A8MUM7 142 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 LDHBP07195 334 aaKnown RBP18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 XRCC5P13010 732 aaKnown RBP18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 USPL1Q5W0Q7 1092 aa18.88■□□□□ 0.61
HMGXB3-201ENST00000502717 RASGRP2Q7LDG7 609 aa18.87■□□□□ 0.61
HMGXB3-201ENST00000502717 TRIM6Q9C030 488 aaPredicted RBP18.87■□□□□ 0.61
HMGXB3-201ENST00000502717 KRT15P19012 456 aa18.87■□□□□ 0.61
HMGXB3-201ENST00000502717 ADCY7P51828 1080 aa18.87■□□□□ 0.61
HMGXB3-201ENST00000502717 PHLDB3Q6NSJ2 640 aa18.87■□□□□ 0.61
HMGXB3-201ENST00000502717 AK8Q96MA6 479 aa18.87■□□□□ 0.61
HMGXB3-201ENST00000502717 PUS3Q9BZE2 481 aaKnown RBP18.87■□□□□ 0.61
HMGXB3-201ENST00000502717 BIRC3Q13489 604 aa18.87■□□□□ 0.61
HMGXB3-201ENST00000502717 SUPT20HQ8NEM7 779 aa18.87■□□□□ 0.61
HMGXB3-201ENST00000502717 CCDC110Q8TBZ0 833 aa18.87■□□□□ 0.61
HMGXB3-201ENST00000502717 ARMCX3Q9UH62 379 aaPredicted RBP18.87■□□□□ 0.61
HMGXB3-201ENST00000502717 DHX9Q08211 1270 aaKnown RBP18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 ANKRD20A3Q5VUR7 823 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 ADGRL3Q9HAR2 1447 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 BCRP11274 1271 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 TECP42680 631 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 REXO1L1PQ8IX06 675 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 TC2NQ8N9U0 490 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 P3H4Q92791 437 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 HOOK2Q96ED9 719 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 CXorf56Q9H5V9 222 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 A0A1B0GTH6 734 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 MEFVO15553 781 aaPredicted RBP18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 TROVE2P10155 538 aaKnown RBP eCLIP18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 EXOSC10Q01780 885 aaKnown RBP18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 DPY19L2Q6NUT2 758 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 VCX3BQ9H321 246 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 SERPINA10Q9UK55 444 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 SMIM24O75264 130 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 METTL16Q86W50 562 aaKnown RBP18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 PLAAQ9Y263 795 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 AK9Q5TCS8 1911 aa18.86■□□□□ 0.61
HMGXB3-201ENST00000502717 F8W031 263 aaPredicted RBP18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 IFNAR2P48551 515 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 GSPT2Q8IYD1 628 aaKnown RBP18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 MRPL44Q9H9J2 332 aaKnown RBP18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 ZSWIM5Q9P217 1185 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 SMCO2A6NFE2 343 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 PCCAP05165 728 aaPredicted RBP18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 BICD1Q96G01 975 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 CARD10Q9BWT7 1032 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 NOP53Q9NZM5 478 aaKnown RBP18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 DAAM1Q9Y4D1 1078 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 KDM3AQ9Y4C1 1321 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 TFAP4Q01664 338 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 DRP2Q13474 957 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 ATP8A1Q9Y2Q0 1164 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 ARHGEF40Q8TER5 1519 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 NEK8Q86SG6 692 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 YY1AP1Q9H869 796 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 KLC4Q9NSK0 619 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 DNM3Q9UQ16 869 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 IQGAP1P46940 1657 aa18.85■□□□□ 0.61
HMGXB3-201ENST00000502717 GMNCA6NCL1 334 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 FTCDO95954 541 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 TTLL7Q6ZT98 887 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 NLRP14Q86W24 1093 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 MB21D2Q8IYB1 491 aaPredicted RBP18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 RIC8AQ9NPQ8 531 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 USP17L12C9JPN9 530 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 USP17L21D6R901 530 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 PRPF3O43395 683 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms