RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 MCM3APO60318 1980 aa22.87■■□□□ 1.25
HLA-B-255ENST00000498007 OPLAHO14841 1288 aa22.87■■□□□ 1.25
HLA-B-255ENST00000498007 CFBP00751 764 aa22.87■■□□□ 1.25
HLA-B-255ENST00000498007 CCND3P30281 292 aaPredicted RBP22.87■■□□□ 1.25
HLA-B-255ENST00000498007 ZNF467Q7Z7K2 595 aaPredicted RBP22.87■■□□□ 1.25
HLA-B-255ENST00000498007 TBC1D5Q92609 795 aa22.87■■□□□ 1.25
HLA-B-255ENST00000498007 GPKOWQ92917 476 aaPredicted RBP eCLIP22.87■■□□□ 1.25
HLA-B-255ENST00000498007 KIF2CQ99661 725 aa22.87■■□□□ 1.25
HLA-B-255ENST00000498007 TPCN1Q9ULQ1 816 aa22.87■■□□□ 1.25
HLA-B-255ENST00000498007 ASTN1O14525 1302 aa22.86■■□□□ 1.25
HLA-B-255ENST00000498007 PPFIA3O75145 1194 aa22.86■■□□□ 1.25
HLA-B-255ENST00000498007 IGHA2P01877 340 aa22.86■■□□□ 1.25
HLA-B-255ENST00000498007 CNGA1P29973 690 aa22.86■■□□□ 1.25
HLA-B-255ENST00000498007 PRAMEF19Q5SWL8 479 aa22.86■■□□□ 1.25
HLA-B-255ENST00000498007 RGS22Q8NE09 1264 aa22.86■■□□□ 1.25
HLA-B-255ENST00000498007 PHKBQ93100 1093 aa22.86■■□□□ 1.25
HLA-B-255ENST00000498007 DDX49Q9Y6V7 483 aaKnown RBP22.86■■□□□ 1.25
HLA-B-255ENST00000498007 V9GY48 417 aaPredicted RBP22.86■■□□□ 1.25
HLA-B-255ENST00000498007 SYNGAP1Q96PV0 1343 aa22.85■■□□□ 1.25
HLA-B-255ENST00000498007 POTEFA5A3E0 1075 aa22.85■■□□□ 1.25
HLA-B-255ENST00000498007 CYBAP13498 195 aa22.85■■□□□ 1.25
HLA-B-255ENST00000498007 ARMCX2Q7L311 632 aa22.85■■□□□ 1.25
HLA-B-255ENST00000498007 MSL3Q8N5Y2 521 aaKnown RBP22.85■■□□□ 1.25
HLA-B-255ENST00000498007 TRPV1Q8NER1 839 aa22.85■■□□□ 1.25
HLA-B-255ENST00000498007 TBC1D32Q96NH3 1257 aa22.85■■□□□ 1.25
HLA-B-255ENST00000498007 DEFB118Q96PH6 123 aa22.85■■□□□ 1.25
HLA-B-255ENST00000498007 SLKQ9H2G2 1235 aaPredicted RBP22.85■■□□□ 1.25
HLA-B-255ENST00000498007 ADD3Q9UEY8 706 aaKnown RBP22.85■■□□□ 1.25
HLA-B-255ENST00000498007 CNPY2Q9Y2B0 182 aa22.85■■□□□ 1.25
HLA-B-255ENST00000498007 FRMPD3Q5JV73 1810 aa22.85■■□□□ 1.25
HLA-B-255ENST00000498007 CPLX1O14810 134 aa22.84■■□□□ 1.25
HLA-B-255ENST00000498007 HOXA13P31271 388 aaPredicted RBP22.84■■□□□ 1.25
HLA-B-255ENST00000498007 ALDH5A1P51649 535 aaPredicted RBP22.84■■□□□ 1.25
HLA-B-255ENST00000498007 WWC2Q6AWC2 1192 aa22.84■■□□□ 1.25
HLA-B-255ENST00000498007 MAMDC4Q6UXC1 1216 aa22.84■■□□□ 1.25
HLA-B-255ENST00000498007 SYTL5Q8TDW5 730 aaPredicted RBP22.84■■□□□ 1.25
HLA-B-255ENST00000498007 SLC26A6Q9BXS9 759 aa22.84■■□□□ 1.25
HLA-B-255ENST00000498007 PAK6Q9NQU5 681 aaPredicted RBP22.84■■□□□ 1.25
HLA-B-255ENST00000498007 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.84■■□□□ 1.25
HLA-B-255ENST00000498007 ZHX1Q9UKY1 873 aaPredicted RBP22.84■■□□□ 1.25
HLA-B-255ENST00000498007 ASB14A6NK59 587 aa22.83■■□□□ 1.25
HLA-B-255ENST00000498007 HSD17B4P51659 736 aa22.83■■□□□ 1.25
HLA-B-255ENST00000498007 AKAP17AQ02040 695 aaKnown RBP22.83■■□□□ 1.25
HLA-B-255ENST00000498007 SCRN1Q12765 414 aa22.83■■□□□ 1.25
HLA-B-255ENST00000498007 NTRK3Q16288 839 aa22.83■■□□□ 1.25
HLA-B-255ENST00000498007 COL20A1Q9P218 1284 aa22.83■■□□□ 1.25
HLA-B-255ENST00000498007 GCOM1H8Y6P7 765 aaPredicted RBP22.82■■□□□ 1.24
HLA-B-255ENST00000498007 LARGE1O95461 756 aa22.82■■□□□ 1.24
HLA-B-255ENST00000498007 SNAI1O95863 264 aaPredicted RBP22.82■■□□□ 1.24
HLA-B-255ENST00000498007 GJB1P08034 283 aa22.82■■□□□ 1.24
HLA-B-255ENST00000498007 POLR2MP0CAP2 368 aa22.82■■□□□ 1.24
HLA-B-255ENST00000498007 IFNAR1P17181 557 aa22.82■■□□□ 1.24
HLA-B-255ENST00000498007 RABEP1Q15276 862 aa22.82■■□□□ 1.24
HLA-B-255ENST00000498007 U2AF1L4Q8WU68 220 aaKnown RBP22.82■■□□□ 1.24
HLA-B-255ENST00000498007 PFKFB2O60825 505 aa22.81■■□□□ 1.24
HLA-B-255ENST00000498007 NAPAP54920 295 aa22.81■■□□□ 1.24
HLA-B-255ENST00000498007 ME3Q16798 604 aa22.81■■□□□ 1.24
HLA-B-255ENST00000498007 CPLX2Q6PUV4 134 aaKnown RBP22.81■■□□□ 1.24
HLA-B-255ENST00000498007 TAAR1Q96RJ0 339 aa22.81■■□□□ 1.24
HLA-B-255ENST00000498007 MAF1Q9H063 256 aa22.81■■□□□ 1.24
HLA-B-255ENST00000498007 STXBP3O00186 592 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 PRPF3O43395 683 aaKnown RBP22.8■■□□□ 1.24
HLA-B-255ENST00000498007 SCG2P13521 617 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 EN2P19622 333 aaPredicted RBP22.8■■□□□ 1.24
HLA-B-255ENST00000498007 GJA8P48165 433 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 GHRHRQ02643 423 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 PFKFB3Q16875 520 aaPredicted RBP22.8■■□□□ 1.24
HLA-B-255ENST00000498007 ANO1Q5XXA6 986 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 EEPD1Q7L9B9 569 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 FCHSD1Q86WN1 690 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 TRIM22Q8IYM9 498 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 NECAB1Q8N987 351 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 DNERQ8NFT8 737 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 CUL5Q93034 780 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 RMDN3Q96TC7 470 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 MPHOSPH6Q99547 160 aaKnown RBP22.8■■□□□ 1.24
HLA-B-255ENST00000498007 RNF26Q9BY78 433 aaPredicted RBP22.8■■□□□ 1.24
HLA-B-255ENST00000498007 RBM27Q9P2N5 1060 aaKnown RBP22.8■■□□□ 1.24
HLA-B-255ENST00000498007 DDX20Q9UHI6 824 aaKnown RBP22.8■■□□□ 1.24
HLA-B-255ENST00000498007 NRBP1Q9UHY1 535 aa22.8■■□□□ 1.24
HLA-B-255ENST00000498007 hCG_1984214I3L0E3 225 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 SEPT4O43236 478 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 SGPL1O95470 568 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 ZNF865P0CJ78 1059 aaPredicted RBP22.79■■□□□ 1.24
HLA-B-255ENST00000498007 EIF2AK2P19525 551 aaKnown RBP22.79■■□□□ 1.24
HLA-B-255ENST00000498007 PDE4DQ08499 809 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 SSRP1Q08945 709 aaKnown RBP22.79■■□□□ 1.24
HLA-B-255ENST00000498007 ACVR2BQ13705 512 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 ARHGEF16Q5VV41 709 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 TYW1BQ6NUM6 668 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 PPP1R18Q6NYC8 613 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 FBXO16Q8IX29 292 aaPredicted RBP22.79■■□□□ 1.24
HLA-B-255ENST00000498007 ZNF713Q8N859 430 aaPredicted RBP22.79■■□□□ 1.24
HLA-B-255ENST00000498007 SMARCC2Q8TAQ2 1214 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 SHISA4Q96DD7 197 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 ABHD16BQ9H3Z7 469 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 PSTPIP2Q9H939 334 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 BARHL2Q9NY43 387 aa22.79■■□□□ 1.24
HLA-B-255ENST00000498007 MAP3K20Q9NYL2 800 aaKnown RBP22.79■■□□□ 1.24
HLA-B-255ENST00000498007 CDKL5O76039 1030 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms