RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 CGGBP1Q9UFW8 167 aaPredicted RBP5.98□□□□□ -1.45
CBX3-208ENST00000497498 SUSD2Q9UGT4 822 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 PLA2G2DQ9UNK4 145 aa5.98□□□□□ -1.45
CBX3-208ENST00000497498 STXBP3O00186 592 aa5.97□□□□□ -1.45
CBX3-208ENST00000497498 FFAR3O14843 346 aa5.97□□□□□ -1.45
CBX3-208ENST00000497498 ATF2P15336 505 aa5.97□□□□□ -1.45
CBX3-208ENST00000497498 SYN1P17600 705 aa5.97□□□□□ -1.45
CBX3-208ENST00000497498 TACR1P25103 407 aa5.97□□□□□ -1.45
CBX3-208ENST00000497498 ADAT2Q7Z6V5 191 aaKnown RBP5.97□□□□□ -1.45
CBX3-208ENST00000497498 ZNF513Q8N8E2 541 aaPredicted RBP5.97□□□□□ -1.45
CBX3-208ENST00000497498 FGD4Q96M96 766 aa5.97□□□□□ -1.45
CBX3-208ENST00000497498 ZC3H12DA2A288 527 aaKnown RBP5.96□□□□□ -1.46
CBX3-208ENST00000497498 C2orf71A6NGG8 1288 aa5.96□□□□□ -1.46
CBX3-208ENST00000497498 VAMP4O75379 141 aa5.96□□□□□ -1.46
CBX3-208ENST00000497498 NASPP49321 788 aaPredicted RBP5.96□□□□□ -1.46
CBX3-208ENST00000497498 FOXO4P98177 505 aa5.96□□□□□ -1.46
CBX3-208ENST00000497498 SYT8Q8NBV8 401 aa5.96□□□□□ -1.46
CBX3-208ENST00000497498 SEC16BQ96JE7 1060 aa5.96□□□□□ -1.46
CBX3-208ENST00000497498 FBLN5Q9UBX5 448 aa5.96□□□□□ -1.46
CBX3-208ENST00000497498 BACE2Q9Y5Z0 518 aa5.96□□□□□ -1.46
CBX3-208ENST00000497498 PPP1R11O60927 126 aaPredicted RBP5.95□□□□□ -1.46
CBX3-208ENST00000497498 ASGR2P07307 311 aa5.95□□□□□ -1.46
CBX3-208ENST00000497498 NCAM1P13591 858 aa5.95□□□□□ -1.46
CBX3-208ENST00000497498 SEPHS1P49903 392 aa5.95□□□□□ -1.46
CBX3-208ENST00000497498 HTRA3P83110 453 aa5.95□□□□□ -1.46
CBX3-208ENST00000497498 AMPD2Q01433 879 aa5.95□□□□□ -1.46
CBX3-208ENST00000497498 DPY19L1Q2PZI1 675 aa5.95□□□□□ -1.46
CBX3-208ENST00000497498 VWA3BQ502W6 1294 aa5.95□□□□□ -1.46
CBX3-208ENST00000497498 LZTR1Q8N653 840 aa5.95□□□□□ -1.46
CBX3-208ENST00000497498 FNIP1Q8TF40 1166 aa5.95□□□□□ -1.46
CBX3-208ENST00000497498 TSPAN17Q96FV3 270 aa5.95□□□□□ -1.46
CBX3-208ENST00000497498 MTA3Q9BTC8 594 aa5.95□□□□□ -1.46
CBX3-208ENST00000497498 DBR1Q9UK59 544 aaKnown RBP5.95□□□□□ -1.46
CBX3-208ENST00000497498 ANKRD34BA5PLL1 514 aa5.94□□□□□ -1.46
CBX3-208ENST00000497498 PLA2G1BP04054 148 aaKnown RBP5.94□□□□□ -1.46
CBX3-208ENST00000497498 PPP2R5EQ16537 467 aa5.94□□□□□ -1.46
CBX3-208ENST00000497498 C9orf131Q5VYM1 1079 aa5.94□□□□□ -1.46
CBX3-208ENST00000497498 FRMD5Q7Z6J6 570 aa5.94□□□□□ -1.46
CBX3-208ENST00000497498 ZDHHC14Q8IZN3 488 aa5.94□□□□□ -1.46
CBX3-208ENST00000497498 NETO2Q8NC67 525 aa5.94□□□□□ -1.46
CBX3-208ENST00000497498 MRRFQ96E11 262 aaKnown RBP5.94□□□□□ -1.46
CBX3-208ENST00000497498 TEPSINQ96N21 525 aa5.94□□□□□ -1.46
CBX3-208ENST00000497498 KIAA1522Q9P206 1035 aaPredicted RBP5.94□□□□□ -1.46
CBX3-208ENST00000497498 TRBV23OR9-2A0A075B6M9 112 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 PAMP19021 973 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 SLURP1P55000 103 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 RBM10P98175 930 aaKnown RBP5.93□□□□□ -1.46
CBX3-208ENST00000497498 TRIM26Q12899 539 aaPredicted RBP5.93□□□□□ -1.46
CBX3-208ENST00000497498 SKOR2Q2VWA4 1001 aaPredicted RBP5.93□□□□□ -1.46
CBX3-208ENST00000497498 KIAA1211LQ6NV74 962 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 VHLLQ6RSH7 139 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 B3GNT8Q7Z7M8 397 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 SAPCD2Q86UD0 394 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 CABP7Q86V35 215 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 FAM169BQ8N8A8 192 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 CPLX3Q8WVH0 158 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 PEX11GQ96HA9 241 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 APEX2Q9UBZ4 518 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 EMC9Q9Y3B6 208 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 RWDD3Q9Y3V2 267 aa5.93□□□□□ -1.46
CBX3-208ENST00000497498 NPHP3-ACAD11A0A0J9YXS1 232 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 SH3D21A4FU49 640 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 KCNC1P48547 511 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 DLX2Q07687 328 aaPredicted RBP5.92□□□□□ -1.46
CBX3-208ENST00000497498 SLC9A5Q14940 896 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 LIPIQ6XZB0 460 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 CPNE8Q86YQ8 564 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 CPA5Q8WXQ8 436 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 ALG3Q92685 438 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 COPS5Q92905 334 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 TGIF2Q9GZN2 237 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 RXFP1Q9HBX9 757 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.92□□□□□ -1.46
CBX3-208ENST00000497498 GULP1Q9UBP9 304 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 STRIP2Q9ULQ0 834 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 AKT3Q9Y243 479 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 FAN1Q9Y2M0 1017 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 SUGT1Q9Y2Z0 365 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 PMF1-BGLAPU3KQ54 211 aa5.92□□□□□ -1.46
CBX3-208ENST00000497498 C7orf72A4D263 438 aa5.91□□□□□ -1.46
CBX3-208ENST00000497498 PMLP29590 882 aa5.91□□□□□ -1.46
CBX3-208ENST00000497498 MC3RP41968 323 aa5.91□□□□□ -1.46
CBX3-208ENST00000497498 ZNF143P52747 638 aaPredicted RBP5.91□□□□□ -1.46
CBX3-208ENST00000497498 ZNF526Q8TF50 670 aaPredicted RBP5.91□□□□□ -1.46
CBX3-208ENST00000497498 ADAM7Q9H2U9 754 aa5.91□□□□□ -1.46
CBX3-208ENST00000497498 NUDT5Q9UKK9 219 aa5.91□□□□□ -1.46
CBX3-208ENST00000497498 NPHS1O60500 1241 aa5.9□□□□□ -1.46
CBX3-208ENST00000497498 ZBTB7AO95365 584 aa5.9□□□□□ -1.46
CBX3-208ENST00000497498 ERICH6BQ5W0A0 696 aa5.9□□□□□ -1.46
CBX3-208ENST00000497498 WWC2Q6AWC2 1192 aa5.9□□□□□ -1.46
CBX3-208ENST00000497498 POMZP3Q6PJE2 187 aa5.9□□□□□ -1.46
CBX3-208ENST00000497498 ADGRG2Q8IZP9 1017 aa5.9□□□□□ -1.46
CBX3-208ENST00000497498 BVESQ8NE79 360 aa5.9□□□□□ -1.46
CBX3-208ENST00000497498 MMP19Q99542 508 aa5.9□□□□□ -1.46
CBX3-208ENST00000497498 APBA2Q99767 749 aa5.9□□□□□ -1.46
CBX3-208ENST00000497498 ACBD3Q9H3P7 528 aa5.9□□□□□ -1.46
CBX3-208ENST00000497498 BCAS3Q9H6U6 928 aa5.9□□□□□ -1.46
CBX3-208ENST00000497498 A0A1B0GTL3 188 aa5.89□□□□□ -1.47
CBX3-208ENST00000497498 UNCXA6NJT0 531 aa5.89□□□□□ -1.47
CBX3-208ENST00000497498 KCNH1O95259 989 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms