RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 TPTE2Q6XPS3 522 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 RIN2Q8WYP3 895 aaPredicted RBP14.53□□□□□ -0.08
PTPN7-217ENST00000495688 PIGSQ96S52 555 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 FAM207AQ9NSI2 230 aaPredicted RBP14.53□□□□□ -0.08
PTPN7-217ENST00000495688 LRWD1Q9UFC0 647 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 LCMT1Q9UIC8 334 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 CYLC1P35663 651 aaPredicted RBP14.53□□□□□ -0.08
PTPN7-217ENST00000495688 TNNT3P45378 269 aaPredicted RBP14.53□□□□□ -0.08
PTPN7-217ENST00000495688 MRPS25P82663 173 aaKnown RBP14.53□□□□□ -0.08
PTPN7-217ENST00000495688 MUM1L1Q5H9M0 696 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 GALNT17Q6IS24 598 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 DYMQ7RTS9 669 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 DRC1Q96MC2 740 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 GBP3Q9H0R5 595 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 JADE2Q9NQC1 790 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 ZNHIT6Q9NWK9 470 aaKnown RBP14.53□□□□□ -0.08
PTPN7-217ENST00000495688 PSD3Q9NYI0 1048 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 MYH10P35580 1976 aa14.53□□□□□ -0.08
PTPN7-217ENST00000495688 ROBO3Q96MS0 1386 aa14.52□□□□□ -0.08
PTPN7-217ENST00000495688 ZPR1O75312 459 aa14.52□□□□□ -0.08
PTPN7-217ENST00000495688 IDEP14735 1019 aa14.52□□□□□ -0.08
PTPN7-217ENST00000495688 ATP2B2Q01814 1243 aa14.52□□□□□ -0.08
PTPN7-217ENST00000495688 FOXR1Q6PIV2 292 aa14.52□□□□□ -0.08
PTPN7-217ENST00000495688 NEK8Q86SG6 692 aa14.52□□□□□ -0.08
PTPN7-217ENST00000495688 EYA3Q99504 573 aa14.52□□□□□ -0.08
PTPN7-217ENST00000495688 C7orf25Q9BPX7 421 aa14.52□□□□□ -0.08
PTPN7-217ENST00000495688 MAST2Q6P0Q8 1798 aa14.52□□□□□ -0.09
PTPN7-217ENST00000495688 EIF3CLB5ME19 914 aaKnown RBP14.52□□□□□ -0.09
PTPN7-217ENST00000495688 IPO7O95373 1038 aaKnown RBP14.52□□□□□ -0.09
PTPN7-217ENST00000495688 CDK8P49336 464 aa14.52□□□□□ -0.09
PTPN7-217ENST00000495688 C2orf54Q08AI8 447 aa14.52□□□□□ -0.09
PTPN7-217ENST00000495688 HSP90B2PQ58FF3 399 aa14.52□□□□□ -0.09
PTPN7-217ENST00000495688 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.52□□□□□ -0.09
PTPN7-217ENST00000495688 AMOTL1Q8IY63 956 aa14.52□□□□□ -0.09
PTPN7-217ENST00000495688 GLIS3Q8NEA6 775 aa14.52□□□□□ -0.09
PTPN7-217ENST00000495688 WDR66Q8TBY9 1149 aa14.52□□□□□ -0.09
PTPN7-217ENST00000495688 CEP95Q96GE4 821 aa14.52□□□□□ -0.09
PTPN7-217ENST00000495688 AK8Q96MA6 479 aa14.52□□□□□ -0.09
PTPN7-217ENST00000495688 EIF3CQ99613 913 aaKnown RBP14.52□□□□□ -0.09
PTPN7-217ENST00000495688 CAPN6Q9Y6Q1 641 aa14.52□□□□□ -0.09
PTPN7-217ENST00000495688 BICDL2A1A5D9 508 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 BAG3O95817 575 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 ACTN2P35609 894 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 FAM182BQ5T319 152 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 C2CD5Q86YS7 1000 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 CAGE1Q8TC20 777 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 NOC3LQ8WTT2 800 aaKnown RBP14.51□□□□□ -0.09
PTPN7-217ENST00000495688 PSMB7Q99436 277 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 RTFDC1Q9BY42 306 aaPredicted RBP14.51□□□□□ -0.09
PTPN7-217ENST00000495688 FAM204AQ9H8W3 233 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 ARHGAP20Q9P2F6 1191 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 SNED1Q8TER0 1413 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 MYMKA6NI61 221 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 SYF2O95926 243 aaKnown RBP14.51□□□□□ -0.09
PTPN7-217ENST00000495688 BTDP43251 543 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 GRB10Q13322 594 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 CCDC96Q2M329 555 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 TMED8Q6PL24 325 aaPredicted RBP14.51□□□□□ -0.09
PTPN7-217ENST00000495688 KRT25Q7Z3Z0 450 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 ZSCAN29Q8IWY8 852 aaPredicted RBP14.51□□□□□ -0.09
PTPN7-217ENST00000495688 CCDC42Q96M95 316 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 NUP58Q9BVL2 599 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 SPZ1Q9BXG8 430 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 CUEDC2Q9H467 287 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 MLXIPQ9HAP2 919 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 C6orf50Q9HD87 102 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 BLOC1S4Q9NUP1 217 aa14.51□□□□□ -0.09
PTPN7-217ENST00000495688 FRMPD2Q68DX3 1309 aaPredicted RBP14.51□□□□□ -0.09
PTPN7-217ENST00000495688 KDM4FA0A1W2PPD8 638 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 POTEMA6NI47 508 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 USP17L5A8MUK1 530 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 SLC37A4O43826 429 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 KIF5AQ12840 1032 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 EZH2Q15910 746 aaKnown RBP14.5□□□□□ -0.09
PTPN7-217ENST00000495688 NRAPQ86VF7 1730 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 CCDC170Q8IYT3 715 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 MSL3Q8N5Y2 521 aaKnown RBP14.5□□□□□ -0.09
PTPN7-217ENST00000495688 CCDC155Q8N6L0 562 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 GOLGA5Q8TBA6 731 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 ERGIC2Q96RQ1 377 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 NUDT12Q9BQG2 462 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 CNTNAP4Q9C0A0 1308 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 TDP2O95551 362 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 RETREG2Q8NC44 543 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 FAM71BQ8TC56 605 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 HDAC7Q8WUI4 952 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 SECISBP2LQ93073 1101 aaKnown RBP14.5□□□□□ -0.09
PTPN7-217ENST00000495688 GJA10Q969M2 543 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 CCDC47Q96A33 483 aaKnown RBP14.5□□□□□ -0.09
PTPN7-217ENST00000495688 COA7Q96BR5 231 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 RRP36Q96EU6 259 aaKnown RBP14.5□□□□□ -0.09
PTPN7-217ENST00000495688 PURBQ96QR8 312 aaKnown RBP14.5□□□□□ -0.09
PTPN7-217ENST00000495688 TMEM51Q9NW97 253 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 SMARCAL1Q9NZC9 954 aa14.5□□□□□ -0.09
PTPN7-217ENST00000495688 EDIL3O43854 480 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 RNF40O75150 1001 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 RPS6KA4O75676 772 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 CXCR5P32302 372 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 VAV2P52735 878 aa14.49□□□□□ -0.09
PTPN7-217ENST00000495688 PPP4CP60510 307 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms