RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 ORC4O43929 436 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 BNIP3LO60238 219 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 PRDM1O75626 825 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 FGRP09769 529 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 ZKSCAN1P17029 563 aaPredicted RBP11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 RASA1P20936 1047 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 MCCP23508 829 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 NT5C2P49902 561 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 TRDNQ13061 729 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 RRP1BQ14684 758 aaKnown RBP11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 LBRQ14739 615 aaKnown RBP11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 RRP12Q5JTH9 1297 aaKnown RBP11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 USP26Q9BXU7 913 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 CNNM2Q9H8M5 875 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 ELP3Q9H9T3 547 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 PICK1Q9NRD5 415 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 ATXN7L1Q9ULK2 861 aaPredicted RBP11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 SNCAIPQ9Y6H5 919 aa11.93□□□□□ -0.5
RAB11FIP3-211ENST00000495663 MYH4Q9Y623 1939 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 TSPY2A6NKD2 308 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 RANBP6O60518 1105 aaKnown RBP11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 GH2P01242 217 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 TSPY3P0CV98 308 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 TSPY8P0CW00 308 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 BMP4P12644 408 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 AKR1B1P15121 316 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 HSPA6P17066 643 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 ATP4AP20648 1035 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 FGFR3P22607 806 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 HSPA4P34932 840 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 ZNF157P51786 506 aaPredicted RBP11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 SMTNP53814 917 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 SNRPNP63162 240 aaKnown RBP11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 RGMBQ6NW40 437 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 TMEM179Q6ZVK1 233 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 GALNT6Q8NCL4 622 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 ESR2Q92731 530 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 CLMNQ96JQ2 1002 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 KRT23Q9C075 422 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 INCENPQ9NQS7 918 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 ZBTB21Q9ULJ3 1066 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 TACC3Q9Y6A5 838 aa11.92□□□□□ -0.5
RAB11FIP3-211ENST00000495663 NEDD4P46934 1319 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 RASSF10A6NK89 507 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 USP17L5A8MUK1 530 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 TMEM229AB2RXF0 380 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 E7EWF7 191 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 C2CD2LO14523 706 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 PTPRAP18433 802 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 SOX11P35716 441 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 CTBSQ01459 385 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 TFAP4Q01664 338 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 PPATQ06203 517 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 KRT32Q14532 448 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 RAB3GAP1Q15042 981 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 DEFB115Q30KQ5 88 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 RALYLQ86SE5 291 aaKnown RBP11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 ERO1BQ86YB8 467 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 NCOA7Q8NI08 942 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 CRISPLD1Q9H336 500 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 AS3MTQ9HBK9 375 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 USP3Q9Y6I4 520 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 PTPRFP10586 1907 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 PLIN4Q96Q06 1357 aa11.91□□□□□ -0.5
RAB11FIP3-211ENST00000495663 B4E1Z4 1266 aa11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 JAG1P78504 1218 aa11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 SEPT2Q15019 361 aa11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 SHROOM1Q2M3G4 852 aaPredicted RBP11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 FAM47AQ5JRC9 791 aa11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 KCNB2Q92953 911 aa11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 OPTNQ96CV9 577 aa11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 POM121Q96HA1 1249 aa11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 NIFKQ9BYG3 293 aaKnown RBP11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 UPF2Q9HAU5 1272 aaKnown RBP11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 NDFIP2Q9NV92 336 aa11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 TAF6LQ9Y6J9 622 aa11.9□□□□□ -0.5
RAB11FIP3-211ENST00000495663 ZBTB48P10074 688 aaPredicted RBP11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 SKIP12755 728 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 GUCY1A2P33402 732 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 ECE1P42892 770 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 ICA1Q05084 483 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 PPIL2Q13356 520 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 PLA2G4EQ3MJ16 856 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 STOX1Q6ZVD7 989 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 IQCA1Q86XH1 822 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 RASAL3Q86YV0 1011 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 WNK4Q96J92 1243 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 BACH2Q9BYV9 841 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 KANSL2Q9H9L4 492 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 DNAAF2Q9NVR5 837 aaKnown RBP11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 SNX14Q9Y5W7 946 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 ZHX2Q9Y6X8 837 aa11.89□□□□□ -0.51
RAB11FIP3-211ENST00000495663 LOC100996750A0A140TA64 210 aa11.88□□□□□ -0.51
RAB11FIP3-211ENST00000495663 HTRA3P83110 453 aa11.88□□□□□ -0.51
RAB11FIP3-211ENST00000495663 FOXK2Q01167 660 aa11.88□□□□□ -0.51
RAB11FIP3-211ENST00000495663 CYP4F22Q6NT55 531 aa11.88□□□□□ -0.51
RAB11FIP3-211ENST00000495663 CCDC84Q86UT8 332 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP3-211ENST00000495663 ZNF280CQ8ND82 737 aa11.88□□□□□ -0.51
RAB11FIP3-211ENST00000495663 NEK1Q96PY6 1258 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms