RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TMEM63BQ5T3F8 832 aa27.31■■□□□ 1.96
COL27A1-208ENST00000494780 CLEC4DQ8WXI8 215 aa27.31■■□□□ 1.96
COL27A1-208ENST00000494780 ESR2Q92731 530 aa27.31■■□□□ 1.96
COL27A1-208ENST00000494780 GRIN2DO15399 1336 aa27.31■■□□□ 1.96
COL27A1-208ENST00000494780 WDR19Q8NEZ3 1342 aa27.31■■□□□ 1.96
COL27A1-208ENST00000494780 CYP2C18P33260 490 aa27.3■■□□□ 1.96
COL27A1-208ENST00000494780 NT5C2P49902 561 aa27.3■■□□□ 1.96
COL27A1-208ENST00000494780 B4GALNT3Q6L9W6 998 aa27.3■■□□□ 1.96
COL27A1-208ENST00000494780 RNF207Q6ZRF8 634 aa27.3■■□□□ 1.96
COL27A1-208ENST00000494780 ZNF365Q70YC5 407 aa27.3■■□□□ 1.96
COL27A1-208ENST00000494780 CHD1LQ86WJ1 897 aa27.3■■□□□ 1.96
COL27A1-208ENST00000494780 COL25A1Q9BXS0 654 aaPredicted RBP27.3■■□□□ 1.96
COL27A1-208ENST00000494780 WDR11Q9BZH6 1224 aa27.3■■□□□ 1.96
COL27A1-208ENST00000494780 HIPK3Q9H422 1215 aa27.3■■□□□ 1.96
COL27A1-208ENST00000494780 OSBPL3Q9H4L5 887 aa27.3■■□□□ 1.96
COL27A1-208ENST00000494780 IL23AQ9NPF7 189 aa27.3■■□□□ 1.96
COL27A1-208ENST00000494780 RBM47A0AV96 593 aaKnown RBP27.29■■□□□ 1.96
COL27A1-208ENST00000494780 ACRP10323 421 aa27.29■■□□□ 1.96
COL27A1-208ENST00000494780 SLC30A10Q6XR72 485 aa27.29■■□□□ 1.96
COL27A1-208ENST00000494780 PLEKHM2Q8IWE5 1019 aa27.29■■□□□ 1.96
COL27A1-208ENST00000494780 TIFAQ96CG3 184 aa27.29■■□□□ 1.96
COL27A1-208ENST00000494780 ZNF213O14771 459 aa27.28■■□□□ 1.96
COL27A1-208ENST00000494780 CALML3P27482 149 aa27.28■■□□□ 1.96
COL27A1-208ENST00000494780 GRIN2CQ14957 1233 aa27.28■■□□□ 1.96
COL27A1-208ENST00000494780 GPATCH4Q5T3I0 446 aaKnown RBP27.28■■□□□ 1.96
COL27A1-208ENST00000494780 DGKHQ86XP1 1220 aa27.28■■□□□ 1.96
COL27A1-208ENST00000494780 MPHOSPH6Q99547 160 aaKnown RBP27.28■■□□□ 1.96
COL27A1-208ENST00000494780 ZNF576Q9H609 170 aa27.28■■□□□ 1.96
COL27A1-208ENST00000494780 POLR3EQ9NVU0 708 aa27.28■■□□□ 1.96
COL27A1-208ENST00000494780 NEDD4P46934 1319 aa27.27■■□□□ 1.96
COL27A1-208ENST00000494780 PSMC6P62333 389 aa27.27■■□□□ 1.96
COL27A1-208ENST00000494780 NUCB1Q02818 461 aa27.27■■□□□ 1.96
COL27A1-208ENST00000494780 CCDC178Q5BJE1 867 aa27.27■■□□□ 1.96
COL27A1-208ENST00000494780 B4GALT4O60513 344 aa27.26■■□□□ 1.95
COL27A1-208ENST00000494780 RPS6P62753 249 aaKnown RBP27.26■■□□□ 1.95
COL27A1-208ENST00000494780 DNERQ8NFT8 737 aa27.26■■□□□ 1.95
COL27A1-208ENST00000494780 HERVK_113Q902F9 699 aa27.26■■□□□ 1.95
COL27A1-208ENST00000494780 NOC4LQ9BVI4 516 aaKnown RBP27.26■■□□□ 1.95
COL27A1-208ENST00000494780 TRPV6Q9H1D0 765 aa27.26■■□□□ 1.95
COL27A1-208ENST00000494780 MTIF3Q9H2K0 278 aaKnown RBP27.26■■□□□ 1.95
COL27A1-208ENST00000494780 UMODL1Q5DID0 1318 aa27.25■■□□□ 1.95
COL27A1-208ENST00000494780 CPT1AP50416 773 aa27.25■■□□□ 1.95
COL27A1-208ENST00000494780 PDE4DQ08499 809 aa27.25■■□□□ 1.95
COL27A1-208ENST00000494780 ZKSCAN3Q9BRR0 538 aa27.25■■□□□ 1.95
COL27A1-208ENST00000494780 PBX4Q9BYU1 374 aa27.25■■□□□ 1.95
COL27A1-208ENST00000494780 DIAPH3Q9NSV4 1193 aa27.25■■□□□ 1.95
COL27A1-208ENST00000494780 GRXCR1A8MXD5 290 aa27.24■■□□□ 1.95
COL27A1-208ENST00000494780 HIP1O00291 1037 aa27.24■■□□□ 1.95
COL27A1-208ENST00000494780 NKRFO15226 690 aaKnown RBP eCLIP27.24■■□□□ 1.95
COL27A1-208ENST00000494780 IGHDP01880 384 aa27.24■■□□□ 1.95
COL27A1-208ENST00000494780 FGBP02675 491 aa27.24■■□□□ 1.95
COL27A1-208ENST00000494780 EDNRBP24530 442 aa27.24■■□□□ 1.95
COL27A1-208ENST00000494780 CWC27Q6UX04 472 aaKnown RBP27.24■■□□□ 1.95
COL27A1-208ENST00000494780 IQCA1Q86XH1 822 aa27.24■■□□□ 1.95
COL27A1-208ENST00000494780 RGS22Q8NE09 1264 aa27.24■■□□□ 1.95
COL27A1-208ENST00000494780 MAF1Q9H063 256 aa27.24■■□□□ 1.95
COL27A1-208ENST00000494780 ALDH8A1Q9H2A2 487 aaPredicted RBP27.24■■□□□ 1.95
COL27A1-208ENST00000494780 B4DLN1 442 aa27.23■■□□□ 1.95
COL27A1-208ENST00000494780 GOLGA8HP0CJ92 632 aa27.23■■□□□ 1.95
COL27A1-208ENST00000494780 PBX2P40425 430 aa27.23■■□□□ 1.95
COL27A1-208ENST00000494780 MRPL12P52815 198 aaKnown RBP27.23■■□□□ 1.95
COL27A1-208ENST00000494780 PURAQ00577 322 aaKnown RBP27.23■■□□□ 1.95
COL27A1-208ENST00000494780 OR6J1Q8NGC5 347 aa27.23■■□□□ 1.95
COL27A1-208ENST00000494780 ANKS1AQ92625 1134 aa27.23■■□□□ 1.95
COL27A1-208ENST00000494780 UNC80Q8N2C7 3258 aa27.23■■□□□ 1.95
COL27A1-208ENST00000494780 KDM4AO75164 1064 aa27.22■■□□□ 1.95
COL27A1-208ENST00000494780 SUPT20HL2P0C7V6 817 aa27.22■■□□□ 1.95
COL27A1-208ENST00000494780 CCL23P55773 120 aa27.22■■□□□ 1.95
COL27A1-208ENST00000494780 PPP2R5BQ15173 497 aa27.22■■□□□ 1.95
COL27A1-208ENST00000494780 BRDTQ58F21 947 aaPredicted RBP27.22■■□□□ 1.95
COL27A1-208ENST00000494780 PNMA1Q8ND90 353 aa27.22■■□□□ 1.95
COL27A1-208ENST00000494780 SCFD2Q8WU76 684 aa27.22■■□□□ 1.95
COL27A1-208ENST00000494780 WNT8AQ9H1J5 351 aa27.22■■□□□ 1.95
COL27A1-208ENST00000494780 KAT14Q9H8E8 782 aa27.22■■□□□ 1.95
COL27A1-208ENST00000494780 GPHNQ9NQX3 736 aaPredicted RBP27.22■■□□□ 1.95
COL27A1-208ENST00000494780 LAMA4Q16363 1823 aa27.22■■□□□ 1.95
COL27A1-208ENST00000494780 RAD50Q92878 1312 aa27.21■■□□□ 1.95
COL27A1-208ENST00000494780 MYL3P08590 195 aa27.21■■□□□ 1.95
COL27A1-208ENST00000494780 RAB30Q15771 203 aa27.21■■□□□ 1.95
COL27A1-208ENST00000494780 USH1GQ495M9 461 aa27.21■■□□□ 1.95
COL27A1-208ENST00000494780 RPUSD2Q8IZ73 545 aaKnown RBP27.21■■□□□ 1.95
COL27A1-208ENST00000494780 MTG1Q9BT17 334 aaPredicted RBP27.21■■□□□ 1.95
COL27A1-208ENST00000494780 DSCC1Q9BVC3 393 aa27.21■■□□□ 1.95
COL27A1-208ENST00000494780 UBA5Q9GZZ9 404 aa27.21■■□□□ 1.95
COL27A1-208ENST00000494780 CXXC1Q9P0U4 656 aaPredicted RBP27.21■■□□□ 1.95
COL27A1-208ENST00000494780 ZSCAN10Q96SZ4 725 aaPredicted RBP27.2■■□□□ 1.94
COL27A1-208ENST00000494780 MSRAQ9UJ68 235 aa27.2■■□□□ 1.94
COL27A1-208ENST00000494780 CDH23Q9H251 3354 aa27.2■■□□□ 1.94
COL27A1-208ENST00000494780 KPNA6O60684 536 aa27.19■■□□□ 1.94
COL27A1-208ENST00000494780 CDC37Q16543 378 aaPredicted RBP27.19■■□□□ 1.94
COL27A1-208ENST00000494780 OTOP2Q7RTS6 562 aa27.19■■□□□ 1.94
COL27A1-208ENST00000494780 CPVLQ9H3G5 476 aa27.19■■□□□ 1.94
COL27A1-208ENST00000494780 TRMT13Q9NUP7 481 aaKnown RBP27.19■■□□□ 1.94
COL27A1-208ENST00000494780 TNKSO95271 1327 aa27.18■■□□□ 1.94
COL27A1-208ENST00000494780 ABCB11O95342 1321 aa27.18■■□□□ 1.94
COL27A1-208ENST00000494780 B4E1Z4 1266 aa27.18■■□□□ 1.94
COL27A1-208ENST00000494780 IMMTQ16891 758 aaKnown RBP27.18■■□□□ 1.94
COL27A1-208ENST00000494780 ASPRV1Q53RT3 343 aa27.18■■□□□ 1.94
COL27A1-208ENST00000494780 GAS2L1Q99501 681 aaPredicted RBP27.18■■□□□ 1.94
COL27A1-208ENST00000494780 CTNNA3Q9UI47 895 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms