RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 RTP1P59025 263 aa12.16□□□□□ -0.46
NINJ1-205ENST00000490564 TSGA10IPQ3SY00 556 aa12.16□□□□□ -0.46
NINJ1-205ENST00000490564 CCSAPQ6IQ19 270 aaPredicted RBP12.16□□□□□ -0.46
NINJ1-205ENST00000490564 TAPT1Q6NXT6 567 aa12.16□□□□□ -0.46
NINJ1-205ENST00000490564 MCF2L2Q86YR7 1114 aa12.16□□□□□ -0.46
NINJ1-205ENST00000490564 FBXO16Q8IX29 292 aaPredicted RBP12.16□□□□□ -0.46
NINJ1-205ENST00000490564 ZNF654Q8IZM8 581 aa12.16□□□□□ -0.46
NINJ1-205ENST00000490564 AMNQ9BXJ7 453 aa12.16□□□□□ -0.46
NINJ1-205ENST00000490564 RBM27Q9P2N5 1060 aaKnown RBP12.16□□□□□ -0.46
NINJ1-205ENST00000490564 ZMYND8Q9ULU4 1186 aaPredicted RBP12.16□□□□□ -0.46
NINJ1-205ENST00000490564 GNEQ9Y223 722 aaKnown RBP12.16□□□□□ -0.46
NINJ1-205ENST00000490564 MRPL11Q9Y3B7 192 aaKnown RBP12.16□□□□□ -0.46
NINJ1-205ENST00000490564 MYADML2A6NDP7 307 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 ZBTB5O15062 677 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 CYTH3O43739 400 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 PPP1R11O60927 126 aaPredicted RBP12.15□□□□□ -0.46
NINJ1-205ENST00000490564 SYN1P17600 705 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 PTGS1P23219 599 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 EDNRBP24530 442 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 LIFRP42702 1097 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 ACLYP53396 1101 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 IRX5P78411 483 aaPredicted RBP12.15□□□□□ -0.46
NINJ1-205ENST00000490564 GHRHRQ02643 423 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 TNFAIP2Q03169 654 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 IQSEC1Q6DN90 963 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 EEPD1Q7L9B9 569 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 TMTC2Q8N394 836 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 TBC1D5Q92609 795 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 FERMT2Q96AC1 680 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 MPHOSPH6Q99547 160 aaKnown RBP12.15□□□□□ -0.46
NINJ1-205ENST00000490564 SPC25Q9HBM1 224 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 PDGFCQ9NRA1 345 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 PPP4R2Q9NY27 417 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 Q9Y3F1 56 aa12.15□□□□□ -0.46
NINJ1-205ENST00000490564 RBM47A0AV96 593 aaKnown RBP12.14□□□□□ -0.47
NINJ1-205ENST00000490564 CTAGE5O15320 804 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 CENPBP07199 599 aaPredicted RBP12.14□□□□□ -0.47
NINJ1-205ENST00000490564 C6orf222P0C671 652 aaPredicted RBP12.14□□□□□ -0.47
NINJ1-205ENST00000490564 SMPD1P17405 629 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 SMARCA1P28370 1054 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 BMP8BP34820 402 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 KCNA10Q16322 511 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 TRIM60Q495X7 471 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 TLK2Q86UE8 772 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 SAMD3Q8N6K7 520 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 PCSK9Q8NBP7 692 aaKnown RBP12.14□□□□□ -0.47
NINJ1-205ENST00000490564 SYTL5Q8TDW5 730 aaPredicted RBP12.14□□□□□ -0.47
NINJ1-205ENST00000490564 NUP133Q8WUM0 1156 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 NEK1Q96PY6 1258 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 PIGSQ96S52 555 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 GDF15Q99988 308 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 MAP3K20Q9NYL2 800 aaKnown RBP12.14□□□□□ -0.47
NINJ1-205ENST00000490564 ATP11BQ9Y2G3 1177 aa12.14□□□□□ -0.47
NINJ1-205ENST00000490564 TRIOBPQ9H2D6 2365 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 A0A1W2PPC1 479 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 CCDC69A6NI79 296 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 B4DLN1 442 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 OPLAHO14841 1288 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 ASGR1P07306 291 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 CALM1P0DP23 149 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 CALM2P0DP24 149 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 CALM3P0DP25 149 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 KIF5BP33176 963 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 HSD17B4P51659 736 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 MRPL12P52815 198 aaKnown RBP12.13□□□□□ -0.47
NINJ1-205ENST00000490564 PDE4DQ08499 809 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 TRAF1Q13077 416 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 KRT32Q14532 448 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 TMEM63BQ5T3F8 832 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 NFXL1Q6ZNB6 911 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 SGMS1Q86VZ5 419 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 HOMER1Q86YM7 354 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 RASEFQ8IZ41 740 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 CTCFLQ8NI51 663 aaPredicted RBP12.13□□□□□ -0.47
NINJ1-205ENST00000490564 KCNB2Q92953 911 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 TAAR1Q96RJ0 339 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 MYL10Q9BUA6 226 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 SPZ1Q9BXG8 430 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 STARD7Q9NQZ5 370 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 COL20A1Q9P218 1284 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 PCDHA1Q9Y5I3 950 aa12.13□□□□□ -0.47
NINJ1-205ENST00000490564 PNMA6FA0A0J9YX94 578 aa12.12□□□□□ -0.47
NINJ1-205ENST00000490564 SLC34A2O95436 690 aa12.12□□□□□ -0.47
NINJ1-205ENST00000490564 MAGEA10P43363 369 aaPredicted RBP12.12□□□□□ -0.47
NINJ1-205ENST00000490564 GNAQP50148 359 aa12.12□□□□□ -0.47
NINJ1-205ENST00000490564 EXOSC10Q01780 885 aaKnown RBP12.12□□□□□ -0.47
NINJ1-205ENST00000490564 ADCK5Q3MIX3 580 aa12.12□□□□□ -0.47
NINJ1-205ENST00000490564 DUSP28Q4G0W2 176 aa12.12□□□□□ -0.47
NINJ1-205ENST00000490564 GNASQ5JWF2 1037 aa12.12□□□□□ -0.47
NINJ1-205ENST00000490564 NOL8Q76FK4 1167 aaKnown RBP12.12□□□□□ -0.47
NINJ1-205ENST00000490564 DHX32Q7L7V1 743 aaKnown RBP12.12□□□□□ -0.47
NINJ1-205ENST00000490564 NSUN6Q8TEA1 469 aaKnown RBP12.12□□□□□ -0.47
NINJ1-205ENST00000490564 GLT1D1Q96MS3 346 aa12.12□□□□□ -0.47
NINJ1-205ENST00000490564 IWS1Q96ST2 819 aa12.12□□□□□ -0.47
NINJ1-205ENST00000490564 LZTS2Q9BRK4 669 aa12.12□□□□□ -0.47
NINJ1-205ENST00000490564 LRRC2Q9BYS8 371 aa12.12□□□□□ -0.47
NINJ1-205ENST00000490564 WDR11Q9BZH6 1224 aa12.12□□□□□ -0.47
NINJ1-205ENST00000490564 AP5M1Q9H0R1 490 aa12.12□□□□□ -0.47
NINJ1-205ENST00000490564 ELP1O95163 1332 aa12.11□□□□□ -0.47
NINJ1-205ENST00000490564 NKRFO15226 690 aaKnown RBP eCLIP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms