RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 MTMR8Q96EF0 704 aa20.35■□□□□ 0.85
ATG3-205ENST00000488910 PRKAG2Q9UGJ0 569 aa20.35■□□□□ 0.85
ATG3-205ENST00000488910 ATP11BQ9Y2G3 1177 aa20.35■□□□□ 0.85
ATG3-205ENST00000488910 Q9Y3F1 56 aa20.35■□□□□ 0.85
ATG3-205ENST00000488910 TRIOBPQ9H2D6 2365 aa20.35■□□□□ 0.85
ATG3-205ENST00000488910 LCTP09848 1927 aa20.34■□□□□ 0.85
ATG3-205ENST00000488910 CDC45O75419 566 aa20.34■□□□□ 0.85
ATG3-205ENST00000488910 MCM5P33992 734 aa20.34■□□□□ 0.85
ATG3-205ENST00000488910 MAGEA10P43363 369 aaPredicted RBP20.34■□□□□ 0.85
ATG3-205ENST00000488910 TRAF1Q13077 416 aa20.34■□□□□ 0.85
ATG3-205ENST00000488910 GNASQ5JWF2 1037 aa20.34■□□□□ 0.85
ATG3-205ENST00000488910 RNF20Q5VTR2 975 aa20.34■□□□□ 0.85
ATG3-205ENST00000488910 NOL8Q76FK4 1167 aaKnown RBP20.34■□□□□ 0.85
ATG3-205ENST00000488910 MAP3K14Q99558 947 aa20.34■□□□□ 0.85
ATG3-205ENST00000488910 AMNQ9BXJ7 453 aa20.34■□□□□ 0.85
ATG3-205ENST00000488910 SENP2Q9HC62 589 aa20.34■□□□□ 0.85
ATG3-205ENST00000488910 GNEQ9Y223 722 aaKnown RBP20.34■□□□□ 0.85
ATG3-205ENST00000488910 MYH6P13533 1939 aa20.33■□□□□ 0.85
ATG3-205ENST00000488910 ZBTB5O15062 677 aa20.33■□□□□ 0.85
ATG3-205ENST00000488910 FXR1P51114 621 aaKnown RBP eCLIP20.33■□□□□ 0.85
ATG3-205ENST00000488910 TRIM60Q495X7 471 aa20.33■□□□□ 0.85
ATG3-205ENST00000488910 EEPD1Q7L9B9 569 aa20.33■□□□□ 0.85
ATG3-205ENST00000488910 FBXO16Q8IX29 292 aaPredicted RBP20.33■□□□□ 0.85
ATG3-205ENST00000488910 TMEM87BQ96K49 555 aa20.33■□□□□ 0.85
ATG3-205ENST00000488910 RIOX1Q9H6W3 641 aa20.33■□□□□ 0.85
ATG3-205ENST00000488910 ELP1O95163 1332 aa20.32■□□□□ 0.84
ATG3-205ENST00000488910 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.32■□□□□ 0.84
ATG3-205ENST00000488910 PRC1O43663 620 aa20.32■□□□□ 0.84
ATG3-205ENST00000488910 SMPD1P17405 629 aa20.32■□□□□ 0.84
ATG3-205ENST00000488910 EDNRBP24530 442 aa20.32■□□□□ 0.84
ATG3-205ENST00000488910 GLT1D1Q96MS3 346 aa20.32■□□□□ 0.84
ATG3-205ENST00000488910 AP5M1Q9H0R1 490 aa20.32■□□□□ 0.84
ATG3-205ENST00000488910 LY9Q9HBG7 655 aa20.32■□□□□ 0.84
ATG3-205ENST00000488910 STARD7Q9NQZ5 370 aa20.32■□□□□ 0.84
ATG3-205ENST00000488910 PDGFCQ9NRA1 345 aa20.32■□□□□ 0.84
ATG3-205ENST00000488910 DDX49Q9Y6V7 483 aaKnown RBP20.32■□□□□ 0.84
ATG3-205ENST00000488910 RBM47A0AV96 593 aaKnown RBP20.31■□□□□ 0.84
ATG3-205ENST00000488910 MYADML2A6NDP7 307 aa20.31■□□□□ 0.84
ATG3-205ENST00000488910 ASGR1P07306 291 aa20.31■□□□□ 0.84
ATG3-205ENST00000488910 PDE4DQ08499 809 aa20.31■□□□□ 0.84
ATG3-205ENST00000488910 TLK2Q86UE8 772 aa20.31■□□□□ 0.84
ATG3-205ENST00000488910 SAMD3Q8N6K7 520 aa20.31■□□□□ 0.84
ATG3-205ENST00000488910 TBC1D5Q92609 795 aa20.31■□□□□ 0.84
ATG3-205ENST00000488910 LBHD1Q9BQE6 289 aaPredicted RBP20.31■□□□□ 0.84
ATG3-205ENST00000488910 MAP3K20Q9NYL2 800 aaKnown RBP20.31■□□□□ 0.84
ATG3-205ENST00000488910 CTAGE5O15320 804 aa20.3■□□□□ 0.84
ATG3-205ENST00000488910 DYNC1LI2O43237 492 aaPredicted RBP20.3■□□□□ 0.84
ATG3-205ENST00000488910 ZEB2O60315 1214 aa20.3■□□□□ 0.84
ATG3-205ENST00000488910 DDAH1O94760 285 aa20.3■□□□□ 0.84
ATG3-205ENST00000488910 KIF5BP33176 963 aa20.3■□□□□ 0.84
ATG3-205ENST00000488910 LIFRP42702 1097 aa20.3■□□□□ 0.84
ATG3-205ENST00000488910 TLE2Q04725 743 aa20.3■□□□□ 0.84
ATG3-205ENST00000488910 DUSP28Q4G0W2 176 aa20.3■□□□□ 0.84
ATG3-205ENST00000488910 ZNF654Q8IZM8 581 aa20.3■□□□□ 0.84
ATG3-205ENST00000488910 SYTL5Q8TDW5 730 aaPredicted RBP20.3■□□□□ 0.84
ATG3-205ENST00000488910 NSUN6Q8TEA1 469 aaKnown RBP20.3■□□□□ 0.84
ATG3-205ENST00000488910 TOX2Q96NM4 488 aa20.3■□□□□ 0.84
ATG3-205ENST00000488910 IWS1Q96ST2 819 aa20.3■□□□□ 0.84
ATG3-205ENST00000488910 WDR11Q9BZH6 1224 aa20.3■□□□□ 0.84
ATG3-205ENST00000488910 UBE2OQ9C0C9 1292 aaKnown RBP20.3■□□□□ 0.84
ATG3-205ENST00000488910 PCDHA1Q9Y5I3 950 aa20.3■□□□□ 0.84
ATG3-205ENST00000488910 SH2B2O14492 632 aaPredicted RBP20.29■□□□□ 0.84
ATG3-205ENST00000488910 CABYRO75952 493 aa20.29■□□□□ 0.84
ATG3-205ENST00000488910 SMARCA1P28370 1054 aa20.29■□□□□ 0.84
ATG3-205ENST00000488910 IRX5P78411 483 aaPredicted RBP20.29■□□□□ 0.84
ATG3-205ENST00000488910 FSCN1Q16658 493 aaKnown RBP20.29■□□□□ 0.84
ATG3-205ENST00000488910 TSGA10IPQ3SY00 556 aa20.29■□□□□ 0.84
ATG3-205ENST00000488910 NFXL1Q6ZNB6 911 aa20.29■□□□□ 0.84
ATG3-205ENST00000488910 ANKRD33Q7Z3H0 272 aa20.29■□□□□ 0.84
ATG3-205ENST00000488910 CTCFLQ8NI51 663 aaPredicted RBP20.29■□□□□ 0.84
ATG3-205ENST00000488910 VTI1AQ96AJ9 217 aa20.29■□□□□ 0.84
ATG3-205ENST00000488910 LZTS2Q9BRK4 669 aa20.29■□□□□ 0.84
ATG3-205ENST00000488910 LRRC37A2A6NM11 1700 aa20.29■□□□□ 0.84
ATG3-205ENST00000488910 PNMA6FA0A0J9YX94 578 aa20.28■□□□□ 0.84
ATG3-205ENST00000488910 CCDC69A6NI79 296 aa20.28■□□□□ 0.84
ATG3-205ENST00000488910 NKRFO15226 690 aaKnown RBP eCLIP20.28■□□□□ 0.84
ATG3-205ENST00000488910 CYTH3O43739 400 aa20.28■□□□□ 0.84
ATG3-205ENST00000488910 PPP1R11O60927 126 aaPredicted RBP20.28■□□□□ 0.84
ATG3-205ENST00000488910 GNAQP50148 359 aa20.28■□□□□ 0.84
ATG3-205ENST00000488910 MDM2Q00987 491 aaPredicted RBP20.28■□□□□ 0.84
ATG3-205ENST00000488910 GHRHRQ02643 423 aa20.28■□□□□ 0.84
ATG3-205ENST00000488910 SLC35G1Q2M3R5 365 aa20.28■□□□□ 0.84
ATG3-205ENST00000488910 TAAR1Q96RJ0 339 aa20.28■□□□□ 0.84
ATG3-205ENST00000488910 PIGSQ96S52 555 aa20.28■□□□□ 0.84
ATG3-205ENST00000488910 RMDN3Q96TC7 470 aa20.28■□□□□ 0.84
ATG3-205ENST00000488910 GPHNQ9NQX3 736 aaPredicted RBP20.28■□□□□ 0.84
ATG3-205ENST00000488910 PDLIM7Q9NR12 457 aa20.28■□□□□ 0.84
ATG3-205ENST00000488910 BAZ2BQ9UIF8 2168 aaKnown RBP20.28■□□□□ 0.84
ATG3-205ENST00000488910 MROH7Q68CQ1 1323 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 A0A0U1RQG5 324 aaPredicted RBP20.27■□□□□ 0.84
ATG3-205ENST00000488910 DCDC2CA8MYV0 355 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 CFBP00751 764 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 CLTBP09497 229 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 CALM1P0DP23 149 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 CALM2P0DP24 149 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 CALM3P0DP25 149 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 CDK7P50613 346 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 HSD17B4P51659 736 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 BEX3Q00994 111 aa20.27■□□□□ 0.84
ATG3-205ENST00000488910 ERICH6BQ5W0A0 696 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms