RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 USP17L2Q6R6M4 530 aa20.7■□□□□ 0.9
COL16A1-215ENST00000488897 ENOX1Q8TC92 643 aaKnown RBP20.7■□□□□ 0.9
COL16A1-215ENST00000488897 CCDC17Q96LX7 622 aa20.7■□□□□ 0.9
COL16A1-215ENST00000488897 ZHX1Q9UKY1 873 aaPredicted RBP20.7■□□□□ 0.9
COL16A1-215ENST00000488897 KCNJ14Q9UNX9 436 aa20.7■□□□□ 0.9
COL16A1-215ENST00000488897 ECM2O94769 699 aaPredicted RBP20.69■□□□□ 0.9
COL16A1-215ENST00000488897 SARSP49591 514 aaKnown RBP20.69■□□□□ 0.9
COL16A1-215ENST00000488897 ERCC6LQ2NKX8 1250 aa20.69■□□□□ 0.9
COL16A1-215ENST00000488897 SPECC1Q5M775 1068 aa20.69■□□□□ 0.9
COL16A1-215ENST00000488897 TRIM65Q6PJ69 517 aa20.69■□□□□ 0.9
COL16A1-215ENST00000488897 KCTD1Q719H9 257 aa20.69■□□□□ 0.9
COL16A1-215ENST00000488897 SMARCE1Q969G3 411 aa20.69■□□□□ 0.9
COL16A1-215ENST00000488897 USP17L5A8MUK1 530 aa20.69■□□□□ 0.9
COL16A1-215ENST00000488897 TMEM232C9JQI7 657 aa20.69■□□□□ 0.9
COL16A1-215ENST00000488897 FOXN1O15353 648 aa20.69■□□□□ 0.9
COL16A1-215ENST00000488897 POLR2DO15514 142 aaKnown RBP20.69■□□□□ 0.9
COL16A1-215ENST00000488897 H2AFXP16104 143 aaPredicted RBP20.69■□□□□ 0.9
COL16A1-215ENST00000488897 REXO1L1PQ8IX06 675 aa20.69■□□□□ 0.9
COL16A1-215ENST00000488897 HOOK2Q96ED9 719 aa20.69■□□□□ 0.9
COL16A1-215ENST00000488897 KANSL2Q9H9L4 492 aa20.69■□□□□ 0.9
COL16A1-215ENST00000488897 SRPRBQ9Y5M8 271 aaKnown RBP20.69■□□□□ 0.9
COL16A1-215ENST00000488897 TRPM7Q96QT4 1865 aa20.69■□□□□ 0.9
COL16A1-215ENST00000488897 GOLGA6L9A6NEM1 432 aa20.68■□□□□ 0.9
COL16A1-215ENST00000488897 CDK11BP21127 795 aaKnown RBP20.68■□□□□ 0.9
COL16A1-215ENST00000488897 SNAP25P60880 206 aa20.68■□□□□ 0.9
COL16A1-215ENST00000488897 TBX2Q13207 712 aaPredicted RBP20.68■□□□□ 0.9
COL16A1-215ENST00000488897 STAG2Q8N3U4 1231 aa20.68■□□□□ 0.9
COL16A1-215ENST00000488897 SERTAD1Q9UHV2 236 aa20.68■□□□□ 0.9
COL16A1-215ENST00000488897 hCG_1642624A0A1W2PR95 340 aa20.68■□□□□ 0.9
COL16A1-215ENST00000488897 TTLL1O95922 423 aa20.68■□□□□ 0.9
COL16A1-215ENST00000488897 MORC3Q14149 939 aa20.68■□□□□ 0.9
COL16A1-215ENST00000488897 PPP2R5BQ15173 497 aa20.68■□□□□ 0.9
COL16A1-215ENST00000488897 TTBK2Q6IQ55 1244 aa20.68■□□□□ 0.9
COL16A1-215ENST00000488897 FANCBQ8NB91 859 aa20.68■□□□□ 0.9
COL16A1-215ENST00000488897 CCDC34Q96HJ3 373 aa20.68■□□□□ 0.9
COL16A1-215ENST00000488897 AFG3L2Q9Y4W6 797 aa20.68■□□□□ 0.9
COL16A1-215ENST00000488897 SLC16A2P36021 539 aa20.67■□□□□ 0.9
COL16A1-215ENST00000488897 PNMA1Q8ND90 353 aa20.67■□□□□ 0.9
COL16A1-215ENST00000488897 INTS13Q9NVM9 706 aa20.67■□□□□ 0.9
COL16A1-215ENST00000488897 NFE2L3Q9Y4A8 694 aa20.67■□□□□ 0.9
COL16A1-215ENST00000488897 AOC2O75106 756 aa20.67■□□□□ 0.9
COL16A1-215ENST00000488897 ZNF18P17022 549 aa20.67■□□□□ 0.9
COL16A1-215ENST00000488897 FSTL1Q12841 308 aa20.67■□□□□ 0.9
COL16A1-215ENST00000488897 TMEM139Q8IV31 216 aa20.67■□□□□ 0.9
COL16A1-215ENST00000488897 GPCPD1Q9NPB8 672 aa20.67■□□□□ 0.9
COL16A1-215ENST00000488897 EMILIN3Q9NT22 766 aa20.67■□□□□ 0.9
COL16A1-215ENST00000488897 F5H6K3 240 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 STX10O60499 249 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 TAL1P17542 331 aaPredicted RBP20.66■□□□□ 0.9
COL16A1-215ENST00000488897 GRIN1Q05586 938 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 KLRC3Q07444 240 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 BMS1Q14692 1282 aaKnown RBP20.66■□□□□ 0.9
COL16A1-215ENST00000488897 TREML2Q5T2D2 321 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 SPECC1LQ69YQ0 1117 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 ZNF654Q8IZM8 581 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 ZNF280CQ8ND82 737 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 BAG1Q99933 345 aaPredicted RBP20.66■□□□□ 0.9
COL16A1-215ENST00000488897 UBA5Q9GZZ9 404 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 KAT14Q9H8E8 782 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 PCDHB6Q9Y5E3 794 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 MYH4Q9Y623 1939 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 APLP1P51693 650 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 CT47A1Q5JQC4 288 aaPredicted RBP20.66■□□□□ 0.9
COL16A1-215ENST00000488897 FBXO28Q9NVF7 368 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 PPP2R2CQ9Y2T4 447 aa20.66■□□□□ 0.9
COL16A1-215ENST00000488897 DOCK1Q14185 1865 aa20.65■□□□□ 0.9
COL16A1-215ENST00000488897 PCP11498 1178 aaKnown RBP20.65■□□□□ 0.9
COL16A1-215ENST00000488897 XBP1P17861 261 aa20.65■□□□□ 0.9
COL16A1-215ENST00000488897 UBXN4Q92575 508 aa20.65■□□□□ 0.9
COL16A1-215ENST00000488897 RNF26Q9BY78 433 aaPredicted RBP20.65■□□□□ 0.9
COL16A1-215ENST00000488897 TLL2Q9Y6L7 1015 aa20.65■□□□□ 0.9
COL16A1-215ENST00000488897 NDUFB10O96000 172 aa20.65■□□□□ 0.9
COL16A1-215ENST00000488897 NR5A1Q13285 461 aa20.65■□□□□ 0.9
COL16A1-215ENST00000488897 MNS1Q8NEH6 495 aa20.65■□□□□ 0.9
COL16A1-215ENST00000488897 PAPPA2Q9BXP8 1791 aa20.64■□□□□ 0.9
COL16A1-215ENST00000488897 SPDYE5A6NIY4 337 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 USP17L10C9JJH3 530 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 ACTN4O43707 911 aaKnown RBP20.64■□□□□ 0.89
COL16A1-215ENST00000488897 TPM1P09493 284 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 PRR29P0C7W0 189 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 ERCC5P28715 1186 aaPredicted RBP20.64■□□□□ 0.89
COL16A1-215ENST00000488897 AKAP17AQ02040 695 aaKnown RBP20.64■□□□□ 0.89
COL16A1-215ENST00000488897 ARHGAP29Q52LW3 1261 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 FAM83BQ5T0W9 1011 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 GADL1Q6ZQY3 521 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 ERO1BQ86YB8 467 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 PDILTQ8N807 584 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 TCP11L1Q9NUJ3 509 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 ARGLU1Q9NWB6 273 aaPredicted RBP20.64■□□□□ 0.89
COL16A1-215ENST00000488897 GREB1LQ9C091 1923 aaPredicted RBP20.64■□□□□ 0.89
COL16A1-215ENST00000488897 VWA3AA6NCI4 1184 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 URI1O94763 535 aaPredicted RBP20.64■□□□□ 0.89
COL16A1-215ENST00000488897 GOLGA8FQ08AF8 430 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 GOLGA8DPQ0D2H9 430 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 NOL9Q5SY16 702 aaKnown RBP20.64■□□□□ 0.89
COL16A1-215ENST00000488897 RGMBQ6NW40 437 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 LRRN4CLQ8ND94 238 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 SPATA20Q8TB22 786 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 WNK4Q96J92 1243 aa20.64■□□□□ 0.89
COL16A1-215ENST00000488897 VAT1LQ9HCJ6 419 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms