RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 MRPL38Q96DV4 380 aaKnown RBP18.34■□□□□ 0.53
U2AF1-211ENST00000486519 CCDC17Q96LX7 622 aa18.34■□□□□ 0.53
U2AF1-211ENST00000486519 RAD9AQ99638 391 aa18.34■□□□□ 0.53
U2AF1-211ENST00000486519 CACNA1HO95180 2353 aa18.34■□□□□ 0.53
U2AF1-211ENST00000486519 PTPRZ1P23471 2315 aaPredicted RBP18.33■□□□□ 0.53
U2AF1-211ENST00000486519 F5H6K3 240 aa18.33■□□□□ 0.52
U2AF1-211ENST00000486519 NBNO60934 754 aa18.33■□□□□ 0.52
U2AF1-211ENST00000486519 CHGBP05060 677 aa18.33■□□□□ 0.52
U2AF1-211ENST00000486519 KLRC3Q07444 240 aa18.33■□□□□ 0.52
U2AF1-211ENST00000486519 SLFN5Q08AF3 891 aa18.33■□□□□ 0.52
U2AF1-211ENST00000486519 C12orf60Q5U649 245 aa18.33■□□□□ 0.52
U2AF1-211ENST00000486519 IQSEC1Q6DN90 963 aa18.33■□□□□ 0.52
U2AF1-211ENST00000486519 C16orf86Q6ZW13 317 aa18.33■□□□□ 0.52
U2AF1-211ENST00000486519 CHST13Q8NET6 341 aa18.33■□□□□ 0.52
U2AF1-211ENST00000486519 DHX38Q92620 1227 aaKnown RBP18.33■□□□□ 0.52
U2AF1-211ENST00000486519 Q9Y3F1 56 aa18.33■□□□□ 0.52
U2AF1-211ENST00000486519 ZBED4O75132 1171 aa18.32■□□□□ 0.52
U2AF1-211ENST00000486519 OS9Q13438 667 aaPredicted RBP18.32■□□□□ 0.52
U2AF1-211ENST00000486519 SLC9C2Q5TAH2 1124 aa18.32■□□□□ 0.52
U2AF1-211ENST00000486519 KIAA1211Q6ZU35 1233 aa18.32■□□□□ 0.52
U2AF1-211ENST00000486519 FAM9BQ8IZU0 186 aa18.32■□□□□ 0.52
U2AF1-211ENST00000486519 CLDND1Q9NY35 253 aa18.32■□□□□ 0.52
U2AF1-211ENST00000486519 FBXO40Q9UH90 709 aa18.32■□□□□ 0.52
U2AF1-211ENST00000486519 USP17L12C9JPN9 530 aa18.31■□□□□ 0.52
U2AF1-211ENST00000486519 USP17L21D6R901 530 aa18.31■□□□□ 0.52
U2AF1-211ENST00000486519 BCAR3O75815 825 aa18.31■□□□□ 0.52
U2AF1-211ENST00000486519 KRT37O76014 449 aa18.31■□□□□ 0.52
U2AF1-211ENST00000486519 GNAI2P04899 355 aa18.31■□□□□ 0.52
U2AF1-211ENST00000486519 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.31■□□□□ 0.52
U2AF1-211ENST00000486519 TRIM67Q6ZTA4 783 aa18.31■□□□□ 0.52
U2AF1-211ENST00000486519 RPAINQ86UA6 219 aa18.31■□□□□ 0.52
U2AF1-211ENST00000486519 BANK1Q8NDB2 785 aa18.31■□□□□ 0.52
U2AF1-211ENST00000486519 UPF3BQ9BZI7 483 aaKnown RBP18.31■□□□□ 0.52
U2AF1-211ENST00000486519 ASB14A6NK59 587 aa18.3■□□□□ 0.52
U2AF1-211ENST00000486519 E9PSI1 815 aa18.3■□□□□ 0.52
U2AF1-211ENST00000486519 MBTPS2O43462 519 aa18.3■□□□□ 0.52
U2AF1-211ENST00000486519 SMAD2Q15796 467 aaKnown RBP18.3■□□□□ 0.52
U2AF1-211ENST00000486519 DUSP28Q4G0W2 176 aa18.3■□□□□ 0.52
U2AF1-211ENST00000486519 MTG1Q9BT17 334 aaPredicted RBP18.3■□□□□ 0.52
U2AF1-211ENST00000486519 ACAD9Q9H845 621 aa18.3■□□□□ 0.52
U2AF1-211ENST00000486519 RNF146Q9NTX7 359 aa18.3■□□□□ 0.52
U2AF1-211ENST00000486519 POLR3EQ9NVU0 708 aa18.3■□□□□ 0.52
U2AF1-211ENST00000486519 VPS13AQ96RL7 3174 aa18.29■□□□□ 0.52
U2AF1-211ENST00000486519 SURF6O75683 361 aaKnown RBP18.29■□□□□ 0.52
U2AF1-211ENST00000486519 EPC2Q52LR7 807 aa18.29■□□□□ 0.52
U2AF1-211ENST00000486519 MUM1L1Q5H9M0 696 aa18.29■□□□□ 0.52
U2AF1-211ENST00000486519 CNKSR3Q6P9H4 555 aa18.29■□□□□ 0.52
U2AF1-211ENST00000486519 STK11IPQ8N1F8 1099 aa18.29■□□□□ 0.52
U2AF1-211ENST00000486519 CHMP4CQ96CF2 233 aa18.29■□□□□ 0.52
U2AF1-211ENST00000486519 COG6Q9Y2V7 657 aa18.29■□□□□ 0.52
U2AF1-211ENST00000486519 H0Y858 1186 aa18.28■□□□□ 0.52
U2AF1-211ENST00000486519 MBD4O95243 580 aa18.28■□□□□ 0.52
U2AF1-211ENST00000486519 CXCL10P02778 98 aa18.28■□□□□ 0.52
U2AF1-211ENST00000486519 GTF2F1P35269 517 aaKnown RBP eCLIP18.28■□□□□ 0.52
U2AF1-211ENST00000486519 CHMP4BP1P59074 171 aa18.28■□□□□ 0.52
U2AF1-211ENST00000486519 SNAP25P60880 206 aa18.28■□□□□ 0.52
U2AF1-211ENST00000486519 BFSP2Q13515 415 aa18.28■□□□□ 0.52
U2AF1-211ENST00000486519 TIGD5Q53EQ6 642 aa18.28■□□□□ 0.52
U2AF1-211ENST00000486519 NFRKBQ6P4R8 1299 aa18.28■□□□□ 0.52
U2AF1-211ENST00000486519 FBXL6Q8N531 539 aa18.28■□□□□ 0.52
U2AF1-211ENST00000486519 ATOH1Q92858 354 aaPredicted RBP18.28■□□□□ 0.52
U2AF1-211ENST00000486519 COPS5Q92905 334 aa18.28■□□□□ 0.52
U2AF1-211ENST00000486519 TLR9Q9NR96 1032 aa18.28■□□□□ 0.52
U2AF1-211ENST00000486519 CTDP1Q9Y5B0 961 aaPredicted RBP18.28■□□□□ 0.52
U2AF1-211ENST00000486519 RALGAPA2Q2PPJ7 1873 aa18.27■□□□□ 0.52
U2AF1-211ENST00000486519 GDF6Q6KF10 455 aaPredicted RBP18.27■□□□□ 0.52
U2AF1-211ENST00000486519 LRRC8DQ7L1W4 858 aa18.27■□□□□ 0.52
U2AF1-211ENST00000486519 SUGP1Q8IWZ8 645 aaKnown RBP18.27■□□□□ 0.52
U2AF1-211ENST00000486519 OR6J1Q8NGC5 347 aa18.27■□□□□ 0.52
U2AF1-211ENST00000486519 SSH3Q8TE77 659 aa18.27■□□□□ 0.52
U2AF1-211ENST00000486519 CRBNQ96SW2 442 aa18.27■□□□□ 0.52
U2AF1-211ENST00000486519 WDR11Q9BZH6 1224 aa18.27■□□□□ 0.52
U2AF1-211ENST00000486519 FAM50BQ9Y247 325 aa18.27■□□□□ 0.52
U2AF1-211ENST00000486519 FAM186AA6NE01 2351 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 CACNA1BQ00975 2339 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 TBX10O75333 385 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 RASA1P20936 1047 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 OAZ1P54368 228 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 GPM6BQ13491 265 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 MBTPS1Q14703 1052 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 PTGISQ16647 500 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 CTC1Q2NKJ3 1217 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 TRAF7Q6Q0C0 670 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 ERMP1Q7Z2K6 904 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 MORC4Q8TE76 937 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 WNT8BQ93098 351 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 NSUN3Q9H649 340 aaKnown RBP18.26■□□□□ 0.51
U2AF1-211ENST00000486519 C1orf115Q9H7X2 142 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 VTA1Q9NP79 307 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 CYP39A1Q9NYL5 469 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 NYAP2Q9P242 653 aa18.26■□□□□ 0.51
U2AF1-211ENST00000486519 MYH7P12883 1935 aa18.25■□□□□ 0.51
U2AF1-211ENST00000486519 STXBP3O00186 592 aa18.25■□□□□ 0.51
U2AF1-211ENST00000486519 LINC01565O15544 149 aa18.25■□□□□ 0.51
U2AF1-211ENST00000486519 SELPP16109 830 aa18.25■□□□□ 0.51
U2AF1-211ENST00000486519 ZXDAP98168 799 aa18.25■□□□□ 0.51
U2AF1-211ENST00000486519 MKRN4PQ13434 485 aaPredicted RBP18.25■□□□□ 0.51
U2AF1-211ENST00000486519 LRRFIP1Q32MZ4 808 aaKnown RBP18.25■□□□□ 0.51
U2AF1-211ENST00000486519 CTR9Q6PD62 1173 aa18.25■□□□□ 0.51
U2AF1-211ENST00000486519 LRRC47Q8N1G4 583 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms