RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 SNAP25P60880 206 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 ARHGEF6Q15052 776 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 NTRK3Q16288 839 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 SLC9C1Q4G0N8 1177 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 KIAA1755Q5JYT7 1200 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 RASGRP2Q7LDG7 609 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 NCAPG2Q86XI2 1143 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 IFNL1Q8IU54 200 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 TEX2Q8IWB9 1127 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 RGS22Q8NE09 1264 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 GPRC5AQ8NFJ5 357 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 BRI3BPQ8WY22 251 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 GPKOWQ92917 476 aaPredicted RBP eCLIP7.97□□□□□ -1.13
UBR4-214ENST00000486515 ATG4CQ96DT6 458 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 FAM161BQ96MY7 647 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 RANBP17Q9H2T7 1088 aaKnown RBP7.97□□□□□ -1.13
UBR4-214ENST00000486515 ZSCAN16Q9H4T2 348 aaPredicted RBP7.97□□□□□ -1.13
UBR4-214ENST00000486515 PSTPIP2Q9H939 334 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 SLC38A10Q9HBR0 1119 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 RAVER2Q9HCJ3 691 aaKnown RBP7.97□□□□□ -1.13
UBR4-214ENST00000486515 HOMER2Q9NSB8 354 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 FBXO28Q9NVF7 368 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 SLC5A4Q9NY91 659 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 VPS54Q9P1Q0 977 aa7.97□□□□□ -1.13
UBR4-214ENST00000486515 NOL7Q9UMY1 257 aaKnown RBP7.97□□□□□ -1.13
UBR4-214ENST00000486515 GREB1LQ9C091 1923 aaPredicted RBP7.96□□□□□ -1.13
UBR4-214ENST00000486515 TESPA1A2RU30 521 aaPredicted RBP7.96□□□□□ -1.14
UBR4-214ENST00000486515 SPDYE16A6NNV3 312 aaPredicted RBP7.96□□□□□ -1.14
UBR4-214ENST00000486515 GOLGA6L22H0YM25 854 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 GCOM1H8Y6P7 765 aaPredicted RBP7.96□□□□□ -1.14
UBR4-214ENST00000486515 CYTH3O43739 400 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 CFBP00751 764 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 POLR2MP0CAP2 368 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 SYT1P21579 422 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 GUCY1B3Q02153 619 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 KRT40Q6A162 431 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 WWC2Q6AWC2 1192 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 LBX2Q6XYB7 198 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 BLIDQ8IZY5 108 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 REXO1Q8N1G1 1221 aaKnown RBP7.96□□□□□ -1.14
UBR4-214ENST00000486515 ANKRD35Q8N283 1001 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 SAMD3Q8N6K7 520 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 CHST13Q8NET6 341 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 FBXO18Q8NFZ0 1043 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 COA7Q96BR5 231 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 ERO1AQ96HE7 468 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 TRERF1Q96PN7 1200 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 MROH8Q9H579 483 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 ACAD9Q9H845 621 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 EFCC1Q9HA90 598 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 MAP3K20Q9NYL2 800 aaKnown RBP7.96□□□□□ -1.14
UBR4-214ENST00000486515 DOCK1Q14185 1865 aa7.96□□□□□ -1.14
UBR4-214ENST00000486515 STXBP3O00186 592 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 MARCH6O60337 910 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 EVI5O60447 810 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 FOSP01100 380 aaPredicted RBP7.95□□□□□ -1.14
UBR4-214ENST00000486515 MMP1P03956 469 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 MYCNP04198 464 aaPredicted RBP7.95□□□□□ -1.14
UBR4-214ENST00000486515 ZSCAN22P10073 491 aaPredicted RBP7.95□□□□□ -1.14
UBR4-214ENST00000486515 CYP2C8P10632 490 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 NCLP19338 710 aaKnown RBP7.95□□□□□ -1.14
UBR4-214ENST00000486515 MAPK4P31152 587 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 FUT2Q10981 343 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 KCTD2Q14681 263 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 CSPP1Q1MSJ5 1256 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 FAM110CQ1W6H9 321 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 FAM109BQ6ICB4 259 aaPredicted RBP7.95□□□□□ -1.14
UBR4-214ENST00000486515 GPAT2Q6NUI2 795 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 NSMFQ6X4W1 530 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 KRT25Q7Z3Z0 450 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 BRAPQ7Z569 592 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 DIS3L2Q8IYB7 885 aaKnown RBP7.95□□□□□ -1.14
UBR4-214ENST00000486515 FAM43AQ8N2R8 423 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 ANKRD13CQ8N6S4 541 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 MTMR8Q96EF0 704 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 AGBL1Q96MI9 1066 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 ZNF396Q96N95 335 aaPredicted RBP7.95□□□□□ -1.14
UBR4-214ENST00000486515 NAP1L4Q99733 375 aaKnown RBP7.95□□□□□ -1.14
UBR4-214ENST00000486515 GDF15Q99988 308 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 MAF1Q9H063 256 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 SPATC1LQ9H0A9 340 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 FOXP1Q9H334 677 aaPredicted RBP7.95□□□□□ -1.14
UBR4-214ENST00000486515 RNF146Q9NTX7 359 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 PCDHA4Q9UN74 947 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 CEP131Q9UPN4 1083 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 MUC6Q6W4X9 2439 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 PFASO15067 1338 aa7.95□□□□□ -1.14
UBR4-214ENST00000486515 ESYT2A0FGR8 921 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 ATP2A1O14983 1001 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 STRNO43815 780 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 TLR2O60603 784 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 FCER1AP12319 257 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 FDPSP14324 419 aaKnown RBP7.94□□□□□ -1.14
UBR4-214ENST00000486515 ZNF76P36508 570 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 ERVK-9P63128 1117 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 ERVK-24P63145 666 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 FOXK2Q01167 660 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 ST3GAL1Q11201 340 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 AP3B2Q13367 1082 aa7.94□□□□□ -1.14
UBR4-214ENST00000486515 TMEM132BQ14DG7 1078 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms