RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 LRRC37A3O60309 1634 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 A0A0G2JLW4 131 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 FAM237AA0A1B0GTK4 181 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 ATP1A1P05023 1023 aaKnown RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 FECHP22830 423 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 SLC9C2Q5TAH2 1124 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 NBPF14Q5TI25 921 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 DCUN1D2Q6PH85 259 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 SH2D3CQ8N5H7 860 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 ZNF274Q96GC6 653 aaPredicted RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 NOC4LQ9BVI4 516 aaKnown RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 EIF2AQ9BY44 585 aaKnown RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 ATP6V0A4Q9HBG4 840 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 PPANQ9NQ55 473 aaKnown RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 KLHL14Q9P2G3 628 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 SLC4A4Q9Y6R1 1079 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 C3P01024 1663 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 PFDN1O60925 122 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 STX2P32856 288 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 LSP1P33241 339 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 MAGEA1P43355 309 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 NBPF10Q6P3W6 841 aaKnown RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 SND1Q7KZF4 910 aaKnown RBP eCLIP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 FUKQ8N0W3 1084 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 BORCS6Q96GS4 357 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 KIF9Q9HAQ2 790 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 MON2Q7Z3U7 1717 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 CEP170BQ9Y4F5 1589 aaPredicted RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 RPSAP08865 295 aaKnown RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 KRT9P35527 623 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 KIF23Q02241 960 aaPredicted RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 RESP18Q5W5W9 173 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 ZNF473Q8WTR7 871 aaKnown RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 ETAA1Q9NY74 926 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 TMOD4Q9NZQ9 345 aa12.59□□□□□ -0.39
U2AF1-209ENST00000475639 TPX2Q9ULW0 747 aaKnown RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 SETD1BQ9UPS6 1966 aaKnown RBP12.59□□□□□ -0.39
U2AF1-209ENST00000475639 ESYT2A0FGR8 921 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 CEP104O60308 925 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 IFT88Q13099 833 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 PDCD7Q8N8D1 485 aaKnown RBP12.58□□□□□ -0.4
U2AF1-209ENST00000475639 MAIP1Q8WWC4 291 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 PLCB1Q9NQ66 1216 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 SV2BQ7L1I2 683 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 PDZD8Q8NEN9 1154 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 MAGEC3Q8TD91 643 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 EPN3Q9H201 632 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 RFX1P22670 979 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 ATP6V1E1P36543 226 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 SPRED3Q2MJR0 410 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 SLC4A8Q2Y0W8 1093 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 MCMDC2Q4G0Z9 681 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 CTAGE3PQ8IX95 158 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 PPP4R1Q8TF05 950 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 SLF1Q9BQI6 1058 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 SPATS2LQ9NUQ6 558 aaKnown RBP12.58□□□□□ -0.4
U2AF1-209ENST00000475639 CTTNBP2NLQ9P2B4 639 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 THEGQ9P2T0 379 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 SAR1BQ9Y6B6 198 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 PLCG2P16885 1265 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 PLCD1P51178 756 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 GUCY1A3Q02108 690 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 PLS1Q14651 629 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 PTPAQ15257 358 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 OSCARQ8IYS5 282 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 GPHNQ9NQX3 736 aaPredicted RBP12.58□□□□□ -0.4
U2AF1-209ENST00000475639 WWC3Q9ULE0 1092 aa12.58□□□□□ -0.4
U2AF1-209ENST00000475639 ALKQ9UM73 1620 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 PSMD14O00487 310 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 RNASE9P60153 205 aaKnown RBP12.57□□□□□ -0.4
U2AF1-209ENST00000475639 HDLBPQ00341 1268 aaKnown RBP12.57□□□□□ -0.4
U2AF1-209ENST00000475639 CCDC152Q4G0S7 254 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 BRDTQ58F21 947 aaPredicted RBP12.57□□□□□ -0.4
U2AF1-209ENST00000475639 TSEN2Q8NCE0 465 aaKnown RBP12.57□□□□□ -0.4
U2AF1-209ENST00000475639 CFAP61Q8NHU2 1237 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 SH3GL3Q99963 347 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 NACA2Q9H009 215 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 PPP1R9AQ9ULJ8 1098 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 ZMYM6O95789 1325 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 RNF225M0QZC1 329 aaPredicted RBP12.57□□□□□ -0.4
U2AF1-209ENST00000475639 PDE2AO00408 941 aaPredicted RBP12.57□□□□□ -0.4
U2AF1-209ENST00000475639 HARSP12081 509 aaKnown RBP12.57□□□□□ -0.4
U2AF1-209ENST00000475639 KCTD16Q68DU8 428 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 C6orf89Q6UWU4 347 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 CCDC105Q8IYK2 499 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 PARD3BQ8TEW8 1205 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 RNPC3Q96LT9 517 aaKnown RBP12.57□□□□□ -0.4
U2AF1-209ENST00000475639 KCNH3Q9ULD8 1083 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 REXO2Q9Y3B8 237 aaKnown RBP12.57□□□□□ -0.4
U2AF1-209ENST00000475639 ATP5J2-PTCD1G3V325 749 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 SEC24CP53992 1094 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 MAB21L3Q8N8X9 362 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 MLKLQ8NB16 471 aa12.57□□□□□ -0.4
U2AF1-209ENST00000475639 ADD3Q9UEY8 706 aaKnown RBP12.57□□□□□ -0.4
U2AF1-209ENST00000475639 PPP6R2O75170 966 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 KRT2P35908 639 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 SPATA31D1Q6ZQQ2 1576 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 LCA5Q86VQ0 697 aa12.56□□□□□ -0.4
U2AF1-209ENST00000475639 TMTC1Q8IUR5 882 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms