RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 RASGRP2Q7LDG7 609 aa17.56■□□□□ 0.4
PCCB-212ENST00000474833 HERC6Q8IVU3 1022 aa17.56■□□□□ 0.4
PCCB-212ENST00000474833 ARNTL2Q8WYA1 636 aa17.56■□□□□ 0.4
PCCB-212ENST00000474833 GMCL1Q96IK5 515 aa17.56■□□□□ 0.4
PCCB-212ENST00000474833 SLC9A7Q96T83 725 aa17.56■□□□□ 0.4
PCCB-212ENST00000474833 VTA1Q9NP79 307 aa17.56■□□□□ 0.4
PCCB-212ENST00000474833 TKFCQ3LXA3 575 aa17.55■□□□□ 0.4
PCCB-212ENST00000474833 DUSP28Q4G0W2 176 aa17.55■□□□□ 0.4
PCCB-212ENST00000474833 ZSCAN25Q6NSZ9 544 aa17.55■□□□□ 0.4
PCCB-212ENST00000474833 HLA-CQ95604 372 aa17.55■□□□□ 0.4
PCCB-212ENST00000474833 TRERF1Q96PN7 1200 aa17.55■□□□□ 0.4
PCCB-212ENST00000474833 ALAS1P13196 640 aa17.54■□□□□ 0.4
PCCB-212ENST00000474833 SNAP25P60880 206 aa17.54■□□□□ 0.4
PCCB-212ENST00000474833 NEDD1Q8NHV4 660 aa17.54■□□□□ 0.4
PCCB-212ENST00000474833 PHOSPHO2Q8TCD6 241 aa17.54■□□□□ 0.4
PCCB-212ENST00000474833 PPP1R13LQ8WUF5 828 aa17.54■□□□□ 0.4
PCCB-212ENST00000474833 LCHNA4D1U4 455 aa17.53■□□□□ 0.4
PCCB-212ENST00000474833 PITPNM1O00562 1244 aa17.53■□□□□ 0.4
PCCB-212ENST00000474833 SUPT20HL2P0C7V6 817 aa17.53■□□□□ 0.4
PCCB-212ENST00000474833 RFC2P35250 354 aa17.53■□□□□ 0.4
PCCB-212ENST00000474833 FAM160B2Q86V87 743 aa17.53■□□□□ 0.4
PCCB-212ENST00000474833 STAG1Q8WVM7 1258 aa17.53■□□□□ 0.4
PCCB-212ENST00000474833 PI4K2BG5E9Z4 385 aa17.52■□□□□ 0.4
PCCB-212ENST00000474833 M0R2C6 588 aa17.52■□□□□ 0.4
PCCB-212ENST00000474833 GPAA1O43292 621 aa17.52■□□□□ 0.4
PCCB-212ENST00000474833 PLA2G6O60733 806 aa17.52■□□□□ 0.4
PCCB-212ENST00000474833 IQCF3P0C7M6 154 aa17.52■□□□□ 0.4
PCCB-212ENST00000474833 KIAA1211Q6ZU35 1233 aa17.52■□□□□ 0.4
PCCB-212ENST00000474833 ZNF444Q8N0Y2 327 aaPredicted RBP17.52■□□□□ 0.4
PCCB-212ENST00000474833 APPBP2Q92624 585 aa17.52■□□□□ 0.4
PCCB-212ENST00000474833 CHMP4CQ96CF2 233 aa17.52■□□□□ 0.4
PCCB-212ENST00000474833 POLR3EQ9NVU0 708 aa17.52■□□□□ 0.4
PCCB-212ENST00000474833 PRR12Q9ULL5 1215 aa17.52■□□□□ 0.4
PCCB-212ENST00000474833 RBM47A0AV96 593 aaKnown RBP17.51■□□□□ 0.39
PCCB-212ENST00000474833 RBAK-RBAKDNI3L0D1 243 aa17.51■□□□□ 0.39
PCCB-212ENST00000474833 ACTN1P12814 892 aa17.51■□□□□ 0.39
PCCB-212ENST00000474833 MCCP23508 829 aa17.51■□□□□ 0.39
PCCB-212ENST00000474833 GPNMBQ14956 572 aa17.51■□□□□ 0.39
PCCB-212ENST00000474833 NBPF20Q3BBV1 942 aa17.51■□□□□ 0.39
PCCB-212ENST00000474833 KBTBD3Q8NAB2 608 aa17.51■□□□□ 0.39
PCCB-212ENST00000474833 CHURC1Q8WUH1 139 aa17.51■□□□□ 0.39
PCCB-212ENST00000474833 CTAGE1Q96RT6 745 aa17.51■□□□□ 0.39
PCCB-212ENST00000474833 MTG1Q9BT17 334 aaPredicted RBP17.51■□□□□ 0.39
PCCB-212ENST00000474833 MYL3P08590 195 aa17.5■□□□□ 0.39
PCCB-212ENST00000474833 SLC1A4P43007 532 aa17.5■□□□□ 0.39
PCCB-212ENST00000474833 TDO2P48775 406 aa17.5■□□□□ 0.39
PCCB-212ENST00000474833 NFRKBQ6P4R8 1299 aa17.5■□□□□ 0.39
PCCB-212ENST00000474833 KCTD1Q719H9 257 aa17.5■□□□□ 0.39
PCCB-212ENST00000474833 TMCO2Q7Z6W1 182 aaPredicted RBP17.5■□□□□ 0.39
PCCB-212ENST00000474833 GDPD5Q8WTR4 605 aa17.5■□□□□ 0.39
PCCB-212ENST00000474833 WDR11Q9BZH6 1224 aa17.5■□□□□ 0.39
PCCB-212ENST00000474833 LRRCC1Q9C099 1032 aa17.5■□□□□ 0.39
PCCB-212ENST00000474833 SMARCA5O60264 1052 aaPredicted RBP17.49■□□□□ 0.39
PCCB-212ENST00000474833 BAIAP3O94812 1187 aa17.49■□□□□ 0.39
PCCB-212ENST00000474833 TSPY3P0CV98 308 aa17.49■□□□□ 0.39
PCCB-212ENST00000474833 TSPY8P0CW00 308 aa17.49■□□□□ 0.39
PCCB-212ENST00000474833 CPT1AP50416 773 aa17.49■□□□□ 0.39
PCCB-212ENST00000474833 ALDH5A1P51649 535 aaPredicted RBP17.49■□□□□ 0.39
PCCB-212ENST00000474833 TFAP4Q01664 338 aa17.49■□□□□ 0.39
PCCB-212ENST00000474833 NSMFQ6X4W1 530 aa17.49■□□□□ 0.39
PCCB-212ENST00000474833 IFNL3Q8IZI9 196 aa17.49■□□□□ 0.39
PCCB-212ENST00000474833 ZNF287Q9HBT7 754 aa17.49■□□□□ 0.39
PCCB-212ENST00000474833 IL17RBQ9NRM6 502 aa17.49■□□□□ 0.39
PCCB-212ENST00000474833 ISY1Q9ULR0 285 aaKnown RBP17.49■□□□□ 0.39
PCCB-212ENST00000474833 C5orf42Q9H799 3197 aa17.49■□□□□ 0.39
PCCB-212ENST00000474833 NFIBO00712 420 aa17.48■□□□□ 0.39
PCCB-212ENST00000474833 RNF113AO15541 343 aaKnown RBP17.48■□□□□ 0.39
PCCB-212ENST00000474833 ICAM1P05362 532 aa17.48■□□□□ 0.39
PCCB-212ENST00000474833 RRP1P56182 461 aaKnown RBP17.48■□□□□ 0.39
PCCB-212ENST00000474833 WDR5P61964 334 aaKnown RBP17.48■□□□□ 0.39
PCCB-212ENST00000474833 IKQ13123 557 aaPredicted RBP17.48■□□□□ 0.39
PCCB-212ENST00000474833 BAATQ14032 418 aaPredicted RBP17.48■□□□□ 0.39
PCCB-212ENST00000474833 TCTN1Q2MV58 587 aa17.48■□□□□ 0.39
PCCB-212ENST00000474833 FAM47CQ5HY64 1035 aa17.48■□□□□ 0.39
PCCB-212ENST00000474833 RCSD1Q6JBY9 416 aa17.48■□□□□ 0.39
PCCB-212ENST00000474833 RANBP17Q9H2T7 1088 aaKnown RBP17.48■□□□□ 0.39
PCCB-212ENST00000474833 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
PCCB-212ENST00000474833 CCPG1Q9ULG6 757 aa17.48■□□□□ 0.39
PCCB-212ENST00000474833 A6NJR5 290 aa17.47■□□□□ 0.39
PCCB-212ENST00000474833 FOXP2O15409 715 aa17.47■□□□□ 0.39
PCCB-212ENST00000474833 NMT2O60551 498 aa17.47■□□□□ 0.39
PCCB-212ENST00000474833 GNAT2P19087 354 aa17.47■□□□□ 0.39
PCCB-212ENST00000474833 NOVP48745 357 aa17.47■□□□□ 0.39
PCCB-212ENST00000474833 DEFB103AP81534 67 aa17.47■□□□□ 0.39
PCCB-212ENST00000474833 TSHZ3Q63HK5 1081 aa17.47■□□□□ 0.39
PCCB-212ENST00000474833 SLC30A10Q6XR72 485 aa17.47■□□□□ 0.39
PCCB-212ENST00000474833 OR6J1Q8NGC5 347 aa17.47■□□□□ 0.39
PCCB-212ENST00000474833 FTOQ9C0B1 505 aaKnown RBP eCLIP17.47■□□□□ 0.39
PCCB-212ENST00000474833 LMCD1Q9NZU5 365 aa17.47■□□□□ 0.39
PCCB-212ENST00000474833 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.47■□□□□ 0.39
PCCB-212ENST00000474833 USP34Q70CQ2 3546 aa17.47■□□□□ 0.39
PCCB-212ENST00000474833 SIP14410 1827 aa17.47■□□□□ 0.39
PCCB-212ENST00000474833 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.46■□□□□ 0.39
PCCB-212ENST00000474833 LOC102724159A0A0B4J2E5 919 aa17.46■□□□□ 0.39
PCCB-212ENST00000474833 PATL2C9JE40 543 aaKnown RBP17.46■□□□□ 0.39
PCCB-212ENST00000474833 EDNRBP24530 442 aa17.46■□□□□ 0.39
PCCB-212ENST00000474833 PTPN11Q06124 597 aaPredicted RBP17.46■□□□□ 0.39
PCCB-212ENST00000474833 PWP2Q15269 919 aaKnown RBP17.46■□□□□ 0.39
PCCB-212ENST00000474833 ALYREFQ86V81 257 aaKnown RBP17.46■□□□□ 0.39
PCCB-212ENST00000474833 COPS5Q92905 334 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms