RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	ZMYM1	Q5SVZ6	1142 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	IQSEC1	Q6DN90	963 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	NSMF	Q6X4W1	530 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	KIAA1211	Q6ZU35	1233 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	CLEC4D	Q8WXI8	215 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	DCTPP1	Q9H773	170 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	CD320	Q9NPF0	282 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	SYNPO2	Q9UMS6	1093 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	PCDHA11	Q9Y5I1	949 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	SLC4A7	Q9Y6M7	1214 aa		11.44	□□□□□ -0.58
MCF2L-223	ENST00000473345	TNKS	O95271	1327 aa		11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	RBM47	A0AV96	593 aa	Known RBP	11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	ASB14	A6NK59	587 aa		11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	ZBBX	A8MT70	800 aa		11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	PLA2G6	O60733	806 aa		11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	ARIH2	O95376	493 aa		11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	PLA2G5	P39877	138 aa		11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	ALDH5A1	P51649	535 aa	Predicted RBP	11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	TAP1	Q03518	808 aa		11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	DUSP28	Q4G0W2	176 aa		11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	RCSD1	Q6JBY9	416 aa		11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	FAM160B2	Q86V87	743 aa		11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	AP5M1	Q9H0R1	490 aa		11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	RANBP17	Q9H2T7	1088 aa	Known RBP	11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	ISY1	Q9ULR0	285 aa	Known RBP	11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.43	□□□□□ -0.58
MCF2L-223	ENST00000473345	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	SALL3	Q9BXA9	1300 aa		11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	TLL1	O43897	1013 aa		11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	CABYR	O75952	493 aa		11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	MYL3	P08590	195 aa		11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	IQCF3	P0C7M6	154 aa		11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	POU3F3	P20264	500 aa	Predicted RBP	11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	NBPF20	Q3BBV1	942 aa		11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	CHURC1	Q8WUH1	139 aa		11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	WDR11	Q9BZH6	1224 aa		11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	VTA1	Q9NP79	307 aa		11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	CCPG1	Q9ULG6	757 aa		11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345		Q9Y3F1	56 aa		11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	PCDHB15	Q9Y5E8	787 aa		11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	COL4A4	P53420	1690 aa	Predicted RBP	11.42	□□□□□ -0.58
MCF2L-223	ENST00000473345	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	MYO9B	Q13459	2157 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	TET1	Q8NFU7	2136 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	ERC2	O15083	957 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	ICAM1	P05362	532 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	GNAT2	P19087	354 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	IK	Q13123	557 aa	Predicted RBP	11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	GRB10	Q13322	594 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	TKFC	Q3LXA3	575 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	BTNL9	Q6UXG8	535 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	TBC1D5	Q92609	795 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	DHX38	Q92620	1227 aa	Known RBP	11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	LRFN3	Q9BTN0	628 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	CPVL	Q9H3G5	476 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	RCAN3	Q9UKA8	241 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	STX8	Q9UNK0	236 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	SCN10A	Q9Y5Y9	1956 aa		11.41	□□□□□ -0.58
MCF2L-223	ENST00000473345	ZFY	P08048	801 aa	Predicted RBP	11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	FGR	P09769	529 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	FDX1	P10109	184 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	EDNRB	P24530	442 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	DEFB103A	P81534	67 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	PDE4B	Q07343	736 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	HIC1	Q14526	733 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	TMEM67	Q5HYA8	995 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	HERC6	Q8IVU3	1022 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	OR6J1	Q8NGC5	347 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	ARNTL2	Q8WYA1	636 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	WNT8B	Q93098	351 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	TMEM47	Q9BQJ4	181 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	NAPB	Q9H115	298 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	GPCPD1	Q9NPB8	672 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	COL20A1	Q9P218	1284 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	TRANK1	O15050	2925 aa		11.4	□□□□□ -0.58
MCF2L-223	ENST00000473345	TANC1	Q9C0D5	1861 aa		11.4	□□□□□ -0.59
MCF2L-223	ENST00000473345	BDP1	A6H8Y1	2624 aa		11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	FAM86C2P	A6NEL3	165 aa		11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	TSPY2	A6NKD2	308 aa		11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	MS4A1	P11836	297 aa		11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	HOXD11	P31277	338 aa	Predicted RBP	11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	SKIV2L	Q15477	1246 aa	Known RBP	11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	CCDC96	Q2M329	555 aa		11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	SYDE2	Q5VT97	1194 aa		11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	TRAF7	Q6Q0C0	670 aa		11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	RPUSD2	Q8IZ73	545 aa	Known RBP	11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	KAT2B	Q92831	832 aa		11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	MTG1	Q9BT17	334 aa	Predicted RBP	11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	OSBPL7	Q9BZF2	842 aa		11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	MTIF3	Q9H2K0	278 aa	Known RBP	11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	ANAPC4	Q9UJX5	808 aa		11.39	□□□□□ -0.59
MCF2L-223	ENST00000473345	PTPDC1	A2A3K4	754 aa		11.38	□□□□□ -0.59
MCF2L-223	ENST00000473345		A6NJR5	290 aa		11.38	□□□□□ -0.59
MCF2L-223	ENST00000473345	ZEB2	O60315	1214 aa		11.38	□□□□□ -0.59
MCF2L-223	ENST00000473345	NBN	O60934	754 aa		11.38	□□□□□ -0.59
MCF2L-223	ENST00000473345	CALML3	P27482	149 aa		11.38	□□□□□ -0.59
MCF2L-223	ENST00000473345	RPS6	P62753	249 aa	Known RBP	11.38	□□□□□ -0.59
MCF2L-223	ENST00000473345	FAM47C	Q5HY64	1035 aa		11.38	□□□□□ -0.59
MCF2L-223	ENST00000473345	GDF6	Q6KF10	455 aa	Predicted RBP	11.38	□□□□□ -0.59
MCF2L-223	ENST00000473345	CCDC62	Q6P9F0	684 aa		11.38	□□□□□ -0.59

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