RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 IKBKEQ14164 716 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 SYCP1Q15431 976 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 TAF1CQ15572 869 aaPredicted RBP5.78□□□□□ -1.48
LRCH3-214ENST00000473177 CAVIN1Q6NZI2 390 aaKnown RBP5.78□□□□□ -1.48
LRCH3-214ENST00000473177 TPTE2Q6XPS3 522 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 MAP4K3Q8IVH8 894 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 BEND7Q8N7W2 519 aaPredicted RBP5.78□□□□□ -1.48
LRCH3-214ENST00000473177 ANKRD31Q8N7Z5 1873 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 MYRIPQ8NFW9 859 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 RPGRQ92834 1020 aaKnown RBP5.78□□□□□ -1.48
LRCH3-214ENST00000473177 CHMP4CQ96CF2 233 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 TRIM11Q96F44 468 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 SOX17Q9H6I2 414 aaPredicted RBP5.78□□□□□ -1.48
LRCH3-214ENST00000473177 DCTPP1Q9H773 170 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 LMBRD1Q9NUN5 540 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 POLKQ9UBT6 870 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 USP25Q9UHP3 1055 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 RRP7AQ9Y3A4 280 aaKnown RBP5.78□□□□□ -1.48
LRCH3-214ENST00000473177 KIF3AQ9Y496 699 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 SLX4Q8IY92 1834 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 SCN7AQ01118 1682 aa5.78□□□□□ -1.48
LRCH3-214ENST00000473177 CDHR2Q9BYE9 1310 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 KIF20BQ96Q89 1820 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 SPDYE3A6NKU9 549 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 H7C1D1 291 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 HTATSF1O43719 755 aaKnown RBP5.77□□□□□ -1.49
LRCH3-214ENST00000473177 CAMTA2O94983 1202 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 TBC1D8O95759 1140 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 TUBB4AP04350 444 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 GTF2F1P35269 517 aaKnown RBP eCLIP5.77□□□□□ -1.49
LRCH3-214ENST00000473177 IL6STP40189 918 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-214ENST00000473177 FAAP100Q0VG06 881 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 NFE2L2Q16236 605 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 AOC3Q16853 763 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 ZNF423Q2M1K9 1284 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 TSNAXIP1Q2TAA8 658 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 TTC22Q5TAA0 569 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 MEI1Q5TIA1 1274 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 FAM117BQ6P1L5 589 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 KRT26Q7Z3Y9 468 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 PODNQ7Z5L7 613 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 DMRTC2Q8IXT2 367 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-214ENST00000473177 PLEKHF1Q96S99 279 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 TEX13AQ9BXU3 409 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-214ENST00000473177 USP26Q9BXU7 913 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 CEP44Q9C0F1 390 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 OSGEPQ9NPF4 335 aa5.77□□□□□ -1.49
LRCH3-214ENST00000473177 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.77□□□□□ -1.49
LRCH3-214ENST00000473177 ARFGEF2Q9Y6D5 1785 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 LINC01387J3KSC0 135 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 SOX1O00570 391 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-214ENST00000473177 TM4SF5O14894 197 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 FSCN2O14926 492 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-214ENST00000473177 TNIP1Q15025 636 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 SETDB1Q15047 1291 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 CCDC183Q5T5S1 534 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 SULT6B1Q6IMI4 303 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 GAS2L3Q86XJ1 694 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 TMEM87AQ8NBN3 555 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 PIBF1Q8WXW3 757 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 DCPSQ96C86 337 aaKnown RBP5.76□□□□□ -1.49
LRCH3-214ENST00000473177 NECAB3Q96P71 396 aaPredicted RBP5.76□□□□□ -1.49
LRCH3-214ENST00000473177 NOC4LQ9BVI4 516 aaKnown RBP5.76□□□□□ -1.49
LRCH3-214ENST00000473177 PLVAPQ9BX97 442 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 SEC31BQ9NQW1 1179 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 METTL5Q9NRN9 209 aaKnown RBP5.76□□□□□ -1.49
LRCH3-214ENST00000473177 NOP53Q9NZM5 478 aaKnown RBP5.76□□□□□ -1.49
LRCH3-214ENST00000473177 PGAP2Q9UHJ9 254 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 ZNRF3Q9ULT6 936 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 TTF2Q9UNY4 1162 aaKnown RBP5.76□□□□□ -1.49
LRCH3-214ENST00000473177 NIP7Q9Y221 180 aaKnown RBP eCLIP5.76□□□□□ -1.49
LRCH3-214ENST00000473177 PAXBP1Q9Y5B6 917 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 CACNA1SQ13698 1873 aa5.76□□□□□ -1.49
LRCH3-214ENST00000473177 COL4A5P29400 1685 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 ABCC4O15439 1325 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 CNTNAP5Q8WYK1 1306 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 PITPNM2Q9BZ72 1349 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 TRPM7Q96QT4 1865 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 A0A0A0MRY4 1105 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 CCDC66A2RUB6 948 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 KLRG2A4D1S0 409 aaPredicted RBP5.75□□□□□ -1.49
LRCH3-214ENST00000473177 ADM5C9JUS6 153 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 ENC1O14682 589 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 SCAMP3O14828 347 aaKnown RBP5.75□□□□□ -1.49
LRCH3-214ENST00000473177 RNMTO43148 476 aaKnown RBP5.75□□□□□ -1.49
LRCH3-214ENST00000473177 NRDCO43847 1150 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 NEMFO60524 1076 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 FKTNO75072 461 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 VAMP4O75379 141 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 DEAF1O75398 565 aaPredicted RBP5.75□□□□□ -1.49
LRCH3-214ENST00000473177 RAD17O75943 681 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 CDC25BP30305 580 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 CCT4P50991 539 aaKnown RBP5.75□□□□□ -1.49
LRCH3-214ENST00000473177 RAC1P63000 192 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 PPP2R3AQ06190 1150 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 CXCL9Q07325 125 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 C19orf57Q0VDD7 668 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 TXNDC11Q6PKC3 985 aa5.75□□□□□ -1.49
LRCH3-214ENST00000473177 DLK2Q6UY11 383 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms