RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PRRG2O14669 202 aa7.91□□□□□ -1.14
CD46-213ENST00000471987 IGFBP6P24592 240 aaPredicted RBP7.91□□□□□ -1.14
CD46-213ENST00000471987 KIAA1211LQ6NV74 962 aa7.91□□□□□ -1.14
CD46-213ENST00000471987 VHLLQ6RSH7 139 aa7.91□□□□□ -1.14
CD46-213ENST00000471987 CABP7Q86V35 215 aa7.91□□□□□ -1.14
CD46-213ENST00000471987 NLGN1Q8N2Q7 840 aa7.91□□□□□ -1.14
CD46-213ENST00000471987 NCANO14594 1321 aa7.91□□□□□ -1.14
CD46-213ENST00000471987 TRBV23OR9-2A0A075B6M9 112 aa7.9□□□□□ -1.14
CD46-213ENST00000471987 PRR5P85299 388 aa7.9□□□□□ -1.14
CD46-213ENST00000471987 SP8Q8IXZ3 490 aa7.9□□□□□ -1.14
CD46-213ENST00000471987 LINC01356Q8N9X3 169 aa7.9□□□□□ -1.14
CD46-213ENST00000471987 RELTQ969Z4 430 aa7.9□□□□□ -1.14
CD46-213ENST00000471987 ACBD3Q9H3P7 528 aa7.9□□□□□ -1.14
CD46-213ENST00000471987 CCSER2Q9H7U1 834 aa7.9□□□□□ -1.14
CD46-213ENST00000471987 SUSD2Q9UGT4 822 aa7.9□□□□□ -1.14
CD46-213ENST00000471987 A0A0G2JLL6 359 aaPredicted RBP7.89□□□□□ -1.15
CD46-213ENST00000471987 GLI4P10075 376 aa7.89□□□□□ -1.15
CD46-213ENST00000471987 NAT2P11245 290 aa7.89□□□□□ -1.15
CD46-213ENST00000471987 PAMP19021 973 aa7.89□□□□□ -1.15
CD46-213ENST00000471987 CAP1Q01518 475 aa7.89□□□□□ -1.15
CD46-213ENST00000471987 VMACQ2NL98 169 aa7.89□□□□□ -1.15
CD46-213ENST00000471987 CRACR2BQ8N4Y2 399 aaPredicted RBP7.89□□□□□ -1.15
CD46-213ENST00000471987 LZTR1Q8N653 840 aa7.89□□□□□ -1.15
CD46-213ENST00000471987 RNF38Q9H0F5 515 aa7.89□□□□□ -1.15
CD46-213ENST00000471987 HCFC2Q9Y5Z7 792 aa7.89□□□□□ -1.15
CD46-213ENST00000471987 ZC3H12DA2A288 527 aaKnown RBP7.88□□□□□ -1.15
CD46-213ENST00000471987 UNCXA6NJT0 531 aa7.88□□□□□ -1.15
CD46-213ENST00000471987 FBLN1P23142 703 aa7.88□□□□□ -1.15
CD46-213ENST00000471987 LIMS1P48059 325 aa7.88□□□□□ -1.15
CD46-213ENST00000471987 POMZP3Q6PJE2 187 aa7.88□□□□□ -1.15
CD46-213ENST00000471987 FAM169BQ8N8A8 192 aa7.88□□□□□ -1.15
CD46-213ENST00000471987 ANAPC16Q96DE5 110 aa7.88□□□□□ -1.15
CD46-213ENST00000471987 XYLT2Q9H1B5 865 aa7.88□□□□□ -1.15
CD46-213ENST00000471987 LUC7LQ9NQ29 371 aaKnown RBP7.88□□□□□ -1.15
CD46-213ENST00000471987 AKT3Q9Y243 479 aa7.88□□□□□ -1.15
CD46-213ENST00000471987 NPHP3-ACAD11A0A0J9YXS1 232 aa7.87□□□□□ -1.15
CD46-213ENST00000471987 ZNF143P52747 638 aaPredicted RBP7.87□□□□□ -1.15
CD46-213ENST00000471987 NFIXQ14938 502 aa7.87□□□□□ -1.15
CD46-213ENST00000471987 NETO2Q8NC67 525 aa7.87□□□□□ -1.15
CD46-213ENST00000471987 APBA2Q99767 749 aa7.87□□□□□ -1.15
CD46-213ENST00000471987 RTEL1Q9NZ71 1219 aa7.87□□□□□ -1.15
CD46-213ENST00000471987 APEX2Q9UBZ4 518 aa7.87□□□□□ -1.15
CD46-213ENST00000471987 NUDT5Q9UKK9 219 aa7.87□□□□□ -1.15
CD46-213ENST00000471987 FAN1Q9Y2M0 1017 aa7.87□□□□□ -1.15
CD46-213ENST00000471987 RWDD3Q9Y3V2 267 aa7.87□□□□□ -1.15
CD46-213ENST00000471987 ADAMTS20P59510 1910 aa7.86□□□□□ -1.15
CD46-213ENST00000471987 NCAM1P13591 858 aa7.86□□□□□ -1.15
CD46-213ENST00000471987 TRIM26Q12899 539 aaPredicted RBP7.86□□□□□ -1.15
CD46-213ENST00000471987 NCAPHQ15003 741 aa7.86□□□□□ -1.15
CD46-213ENST00000471987 CPNE8Q86YQ8 564 aa7.86□□□□□ -1.15
CD46-213ENST00000471987 ZNF513Q8N8E2 541 aaPredicted RBP7.86□□□□□ -1.15
CD46-213ENST00000471987 BVESQ8NE79 360 aa7.86□□□□□ -1.15
CD46-213ENST00000471987 ALG3Q92685 438 aa7.86□□□□□ -1.15
CD46-213ENST00000471987 EMC9Q9Y3B6 208 aa7.86□□□□□ -1.15
CD46-213ENST00000471987 OTOL1A6NHN0 477 aaPredicted RBP7.85□□□□□ -1.15
CD46-213ENST00000471987 NOP56O00567 594 aaKnown RBP7.85□□□□□ -1.15
CD46-213ENST00000471987 NPHS1O60500 1241 aa7.85□□□□□ -1.15
CD46-213ENST00000471987 KCNH1O95259 989 aa7.85□□□□□ -1.15
CD46-213ENST00000471987 ATF4P18848 351 aaPredicted RBP7.85□□□□□ -1.15
CD46-213ENST00000471987 FOXO4P98177 505 aa7.85□□□□□ -1.15
CD46-213ENST00000471987 FEZF2Q8TBJ5 459 aa7.85□□□□□ -1.15
CD46-213ENST00000471987 USP33Q8TEY7 942 aa7.85□□□□□ -1.15
CD46-213ENST00000471987 TSPAN17Q96FV3 270 aa7.85□□□□□ -1.15
CD46-213ENST00000471987 PEX11GQ96HA9 241 aa7.85□□□□□ -1.15
CD46-213ENST00000471987 GULP1Q9UBP9 304 aa7.85□□□□□ -1.15
CD46-213ENST00000471987 PLA2G2DQ9UNK4 145 aa7.85□□□□□ -1.15
CD46-213ENST00000471987 FOXD2O60548 495 aaPredicted RBP7.84□□□□□ -1.15
CD46-213ENST00000471987 ASGR2P07307 311 aa7.84□□□□□ -1.15
CD46-213ENST00000471987 ATF2P15336 505 aa7.84□□□□□ -1.15
CD46-213ENST00000471987 SLC9A5Q14940 896 aa7.84□□□□□ -1.15
CD46-213ENST00000471987 COPS5Q92905 334 aa7.84□□□□□ -1.15
CD46-213ENST00000471987 MTA3Q9BTC8 594 aa7.84□□□□□ -1.15
CD46-213ENST00000471987 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.84□□□□□ -1.15
CD46-213ENST00000471987 C7orf72A4D263 438 aa7.83□□□□□ -1.16
CD46-213ENST00000471987 FFAR3O14843 346 aa7.83□□□□□ -1.16
CD46-213ENST00000471987 SYN1P17600 705 aa7.83□□□□□ -1.16
CD46-213ENST00000471987 SCRN1Q12765 414 aa7.83□□□□□ -1.16
CD46-213ENST00000471987 VPS37DQ86XT2 251 aa7.83□□□□□ -1.16
CD46-213ENST00000471987 TP53I13Q8NBR0 393 aaPredicted RBP7.83□□□□□ -1.16
CD46-213ENST00000471987 FNIP1Q8TF40 1166 aa7.83□□□□□ -1.16
CD46-213ENST00000471987 RXFP1Q9HBX9 757 aa7.83□□□□□ -1.16
CD46-213ENST00000471987 CAPN10Q9HC96 672 aa7.83□□□□□ -1.16
CD46-213ENST00000471987 FBLN5Q9UBX5 448 aa7.83□□□□□ -1.16
CD46-213ENST00000471987 PMF1-BGLAPU3KQ54 211 aa7.83□□□□□ -1.16
CD46-213ENST00000471987 PPP1R11O60927 126 aaPredicted RBP7.82□□□□□ -1.16
CD46-213ENST00000471987 ZBTB7AO95365 584 aa7.82□□□□□ -1.16
CD46-213ENST00000471987 BUD31P41223 144 aaPredicted RBP7.82□□□□□ -1.16
CD46-213ENST00000471987 WWC2Q6AWC2 1192 aa7.82□□□□□ -1.16
CD46-213ENST00000471987 B3GNT8Q7Z7M8 397 aa7.82□□□□□ -1.16
CD46-213ENST00000471987 ZDHHC14Q8IZN3 488 aa7.82□□□□□ -1.16
CD46-213ENST00000471987 SYT8Q8NBV8 401 aa7.82□□□□□ -1.16
CD46-213ENST00000471987 PPP1R14AQ96A00 147 aa7.82□□□□□ -1.16
CD46-213ENST00000471987 MMP19Q99542 508 aa7.82□□□□□ -1.16
CD46-213ENST00000471987 CLEC1BQ9P126 229 aa7.82□□□□□ -1.16
CD46-213ENST00000471987 PLA2G1BP04054 148 aaKnown RBP7.81□□□□□ -1.16
CD46-213ENST00000471987 PLS3P13797 630 aa7.81□□□□□ -1.16
CD46-213ENST00000471987 PMLP29590 882 aa7.81□□□□□ -1.16
CD46-213ENST00000471987 VWA3BQ502W6 1294 aa7.81□□□□□ -1.16
CD46-213ENST00000471987 TNNI3KQ59H18 835 aa7.81□□□□□ -1.16
CD46-213ENST00000471987 ERICH6BQ5W0A0 696 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms