RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 HMG20BQ9P0W2 317 aa6.59□□□□□ -1.35
VPS41-211ENST00000466017 KIF13BQ9NQT8 1826 aa6.59□□□□□ -1.35
VPS41-211ENST00000466017 ARAP2Q8WZ64 1704 aa6.59□□□□□ -1.36
VPS41-211ENST00000466017 AKAP11Q9UKA4 1901 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 MED23Q9ULK4 1368 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 SALL1Q9NSC2 1324 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 A0A1W2PP55 124 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 C9orf172C9J069 976 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 SOX1O00570 391 aaPredicted RBP6.58□□□□□ -1.36
VPS41-211ENST00000466017 FSCN2O14926 492 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 USP5P45974 858 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 GRIA4P48058 902 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 FKBP1AP62942 108 aaKnown RBP6.58□□□□□ -1.36
VPS41-211ENST00000466017 R3HDM1Q15032 1099 aaKnown RBP6.58□□□□□ -1.36
VPS41-211ENST00000466017 ZMYM1Q5SVZ6 1142 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 SOGA3Q5TF21 947 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 PI16Q6UXB8 463 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 TMC7Q7Z402 723 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 ZGPATQ8N5A5 531 aaKnown RBP6.58□□□□□ -1.36
VPS41-211ENST00000466017 DTWD1Q8N5C7 304 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 TTLL6Q8N841 843 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 TMEM102Q8N9M5 508 aaPredicted RBP6.58□□□□□ -1.36
VPS41-211ENST00000466017 SPATA5Q8NB90 893 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 TTC16Q8NEE8 873 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 TBC1D16Q8TBP0 767 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 FOXD4L4Q8WXT5 416 aaPredicted RBP6.58□□□□□ -1.36
VPS41-211ENST00000466017 KCNB2Q92953 911 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 TBC1D32Q96NH3 1257 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 EYA3Q99504 573 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 MRIQ9BWK5 157 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 COA1Q9GZY4 146 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 SOX13Q9UN79 622 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 SUGT1Q9Y2Z0 365 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 TAF1P21675 1872 aa6.58□□□□□ -1.36
VPS41-211ENST00000466017 FAM205AQ6ZU69 1335 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 LRRC37AA6NMS7 1700 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 SNAP23O00161 211 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 GOLIM4O00461 696 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 RNF113AO15541 343 aaKnown RBP6.57□□□□□ -1.36
VPS41-211ENST00000466017 ADD2P35612 726 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 KCNJ4P48050 445 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 MFAP1P55081 439 aaKnown RBP6.57□□□□□ -1.36
VPS41-211ENST00000466017 ANAPC15P60006 121 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 MCMDC2Q4G0Z9 681 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 IGF2-ASQ6U949 168 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 RTKN2Q8IZC4 609 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 WDR66Q8TBY9 1149 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 APPBP2Q92624 585 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 MAP4K1Q92918 833 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 ZNF622Q969S3 477 aaKnown RBP eCLIP6.57□□□□□ -1.362e-6■■■□□ 17.5
VPS41-211ENST00000466017 TCF12Q99081 682 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 FSD1Q9BTV5 496 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 C22orf23Q9BZE7 217 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 ZC3H12CQ9C0D7 883 aaKnown RBP6.57□□□□□ -1.36
VPS41-211ENST00000466017 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.57□□□□□ -1.367e-7■■■■□ 20
VPS41-211ENST00000466017 CD209Q9NNX6 404 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 DIAPH3Q9NSV4 1193 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 PIM2Q9P1W9 311 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 BIN2Q9UBW5 565 aaPredicted RBP6.57□□□□□ -1.36
VPS41-211ENST00000466017 POLLQ9UGP5 575 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 COL4A1P02462 1669 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 SNED1Q8TER0 1413 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 A0A1B0GUL6 1792 aa6.57□□□□□ -1.36
VPS41-211ENST00000466017 RPAP1Q9BWH6 1393 aaPredicted RBP6.57□□□□□ -1.36
VPS41-211ENST00000466017 ZBTB7AO95365 584 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 DLGAP3O95886 979 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 DPEP1P16444 411 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 GYG1P46976 350 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 EHHADHQ08426 723 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 MAP3K12Q12852 859 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 RASGRF1Q13972 1273 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 CCDC93Q567U6 631 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 SPTY2D1Q68D10 685 aaPredicted RBP6.56□□□□□ -1.36
VPS41-211ENST00000466017 PRPF40BQ6NWY9 871 aaKnown RBP6.56□□□□□ -1.36
VPS41-211ENST00000466017 DPP8Q6V1X1 898 aaPredicted RBP6.56□□□□□ -1.36
VPS41-211ENST00000466017 ZNF804AQ7Z570 1209 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 TXNRD3Q86VQ6 643 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 VPS37DQ86XT2 251 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 CERS3Q8IU89 383 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 GALNT12Q8IXK2 581 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 EPS8L3Q8TE67 593 aaKnown RBP6.56□□□□□ -1.36
VPS41-211ENST00000466017 UBASH3BQ8TF42 649 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 TBC1D22AQ8WUA7 517 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 UBL7Q96S82 380 aaPredicted RBP6.56□□□□□ -1.36
VPS41-211ENST00000466017 PSMD1Q99460 953 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 DSCC1Q9BVC3 393 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 TRAIPQ9BWF2 469 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 SEMA6BQ9H3T3 888 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 ANTXR1Q9H6X2 564 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 SPON1Q9HCB6 807 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 LTBP1Q14766 1721 aa6.56□□□□□ -1.36
VPS41-211ENST00000466017 AK9Q5TCS8 1911 aa6.55□□□□□ -1.36
VPS41-211ENST00000466017 TCRBV5S4A2TA0A5A2 114 aa6.55□□□□□ -1.36
VPS41-211ENST00000466017 WTIPA6NIX2 430 aaPredicted RBP6.55□□□□□ -1.36
VPS41-211ENST00000466017 F8W735 103 aaPredicted RBP6.55□□□□□ -1.36
VPS41-211ENST00000466017 EIF1AYO14602 144 aaKnown RBP6.55□□□□□ -1.36
VPS41-211ENST00000466017 NDUFB5O43674 189 aa6.55□□□□□ -1.36
VPS41-211ENST00000466017 UFL1O94874 794 aa6.55□□□□□ -1.36
VPS41-211ENST00000466017 MAP4K4O95819 1239 aaPredicted RBP6.55□□□□□ -1.36
VPS41-211ENST00000466017 CHRNA5P30532 468 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms