RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 HDAC1Q13547 482 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-214ENST00000465399 RAB30Q15771 203 aa16.72■□□□□ 0.27
ATG4B-214ENST00000465399 DUSP28Q4G0W2 176 aa16.72■□□□□ 0.27
ATG4B-214ENST00000465399 HERVK_113Q902F9 699 aa16.72■□□□□ 0.27
ATG4B-214ENST00000465399 MPHOSPH6Q99547 160 aaKnown RBP16.72■□□□□ 0.27
ATG4B-214ENST00000465399 MSRAQ9UJ68 235 aa16.72■□□□□ 0.27
ATG4B-214ENST00000465399 GRIN2DO15399 1336 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 UMODL1Q5DID0 1318 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 SCN5AQ14524 2016 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 TRIM6-TRIM34B2RNG4 842 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 B4GALT4O60513 344 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 FGBP02675 491 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 PDHBP11177 359 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 PCP11498 1178 aaKnown RBP16.71■□□□□ 0.27
ATG4B-214ENST00000465399 CPT1AP50416 773 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 HAND2P61296 217 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 PSMC6P62333 389 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 TMEM63BQ5T3F8 832 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 MFSD6Q6ZSS7 791 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 CRBNQ96SW2 442 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 NOC4LQ9BVI4 516 aaKnown RBP16.71■□□□□ 0.27
ATG4B-214ENST00000465399 WDR11Q9BZH6 1224 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 TRPV6Q9H1D0 765 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 POLR3EQ9NVU0 708 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 TANC1Q9C0D5 1861 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 SCN10AQ9Y5Y9 1956 aa16.71■□□□□ 0.27
ATG4B-214ENST00000465399 SPTBN5Q9NRC6 3674 aaKnown RBP16.71■□□□□ 0.26
ATG4B-214ENST00000465399 CCDC171Q6TFL3 1326 aa16.7■□□□□ 0.26
ATG4B-214ENST00000465399 CALML3P27482 149 aa16.7■□□□□ 0.26
ATG4B-214ENST00000465399 MFAP1P55081 439 aaKnown RBP16.7■□□□□ 0.26
ATG4B-214ENST00000465399 CCL23P55773 120 aa16.7■□□□□ 0.26
ATG4B-214ENST00000465399 NMIQ13287 307 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-214ENST00000465399 AKNAD1Q5T1N1 836 aa16.7■□□□□ 0.26
ATG4B-214ENST00000465399 SLC30A10Q6XR72 485 aa16.7■□□□□ 0.26
ATG4B-214ENST00000465399 RNF207Q6ZRF8 634 aa16.7■□□□□ 0.26
ATG4B-214ENST00000465399 OTOP2Q7RTS6 562 aa16.7■□□□□ 0.26
ATG4B-214ENST00000465399 RPUSD2Q8IZ73 545 aaKnown RBP16.7■□□□□ 0.26
ATG4B-214ENST00000465399 TTC14Q96N46 770 aa16.7■□□□□ 0.26
ATG4B-214ENST00000465399 ALDH8A1Q9H2A2 487 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-214ENST00000465399 GPHNQ9NQX3 736 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-214ENST00000465399 KIAA1217Q5T5P2 1943 aa16.7■□□□□ 0.26
ATG4B-214ENST00000465399 RAD50Q92878 1312 aa16.7■□□□□ 0.26
ATG4B-214ENST00000465399 SUPT20HL2P0C7V6 817 aa16.69■□□□□ 0.26
ATG4B-214ENST00000465399 PDE4DQ08499 809 aa16.69■□□□□ 0.26
ATG4B-214ENST00000465399 ZNF543Q08ER8 600 aa16.69■□□□□ 0.26
ATG4B-214ENST00000465399 BRDTQ58F21 947 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-214ENST00000465399 ZNF589Q86UQ0 364 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-214ENST00000465399 OR6J1Q8NGC5 347 aa16.69■□□□□ 0.26
ATG4B-214ENST00000465399 RILPL2Q969X0 211 aa16.69■□□□□ 0.26
ATG4B-214ENST00000465399 RNF41Q9H4P4 317 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-214ENST00000465399 PRDM12Q9H4Q4 367 aa16.69■□□□□ 0.26
ATG4B-214ENST00000465399 CXXC1Q9P0U4 656 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-214ENST00000465399 WDR19Q8NEZ3 1342 aa16.69■□□□□ 0.26
ATG4B-214ENST00000465399 RBM47A0AV96 593 aaKnown RBP16.68■□□□□ 0.26
ATG4B-214ENST00000465399 B4DLN1 442 aa16.68■□□□□ 0.26
ATG4B-214ENST00000465399 MYL3P08590 195 aa16.68■□□□□ 0.26
ATG4B-214ENST00000465399 MRPL12P52815 198 aaKnown RBP16.68■□□□□ 0.26
ATG4B-214ENST00000465399 PURAQ00577 322 aaKnown RBP16.68■□□□□ 0.26
ATG4B-214ENST00000465399 PPP2R5BQ15173 497 aa16.68■□□□□ 0.26
ATG4B-214ENST00000465399 USP38Q8NB14 1042 aa16.68■□□□□ 0.26
ATG4B-214ENST00000465399 CLEC4DQ8WXI8 215 aa16.68■□□□□ 0.26
ATG4B-214ENST00000465399 ESR2Q92731 530 aa16.68■□□□□ 0.26
ATG4B-214ENST00000465399 LNPKQ9C0E8 428 aa16.68■□□□□ 0.26
ATG4B-214ENST00000465399 WNT8AQ9H1J5 351 aa16.68■□□□□ 0.26
ATG4B-214ENST00000465399 SLC28A3Q9HAS3 691 aa16.68■□□□□ 0.26
ATG4B-214ENST00000465399 NKRFO15226 690 aaKnown RBP eCLIP16.67■□□□□ 0.26
ATG4B-214ENST00000465399 SNHG28P0DPA3 235 aa16.67■□□□□ 0.26
ATG4B-214ENST00000465399 RPS6P62753 249 aaKnown RBP16.67■□□□□ 0.26
ATG4B-214ENST00000465399 TJAP1Q5JTD0 557 aa16.67■□□□□ 0.26
ATG4B-214ENST00000465399 GPATCH4Q5T3I0 446 aaKnown RBP16.67■□□□□ 0.26
ATG4B-214ENST00000465399 DNERQ8NFT8 737 aa16.67■□□□□ 0.26
ATG4B-214ENST00000465399 SCFD2Q8WU76 684 aa16.67■□□□□ 0.26
ATG4B-214ENST00000465399 PPM1EQ8WY54 764 aa16.67■□□□□ 0.26
ATG4B-214ENST00000465399 SCLYQ96I15 445 aa16.67■□□□□ 0.26
ATG4B-214ENST00000465399 MTG1Q9BT17 334 aaPredicted RBP16.67■□□□□ 0.26
ATG4B-214ENST00000465399 NKX2-4Q9H2Z4 354 aa16.67■□□□□ 0.26
ATG4B-214ENST00000465399 TRMT13Q9NUP7 481 aaKnown RBP16.67■□□□□ 0.26
ATG4B-214ENST00000465399 SLC4A7Q9Y6M7 1214 aa16.67■□□□□ 0.26
ATG4B-214ENST00000465399 TNKSO95271 1327 aa16.67■□□□□ 0.26
ATG4B-214ENST00000465399 TRIP12Q14669 1992 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-214ENST00000465399 ZBBXA8MT70 800 aa16.66■□□□□ 0.26
ATG4B-214ENST00000465399 PFKMP08237 780 aa16.66■□□□□ 0.26
ATG4B-214ENST00000465399 NT5C2P49902 561 aa16.66■□□□□ 0.26
ATG4B-214ENST00000465399 FAM47CQ5HY64 1035 aa16.66■□□□□ 0.26
ATG4B-214ENST00000465399 TBC1D10CQ8IV04 446 aa16.66■□□□□ 0.26
ATG4B-214ENST00000465399 NEDD4P46934 1319 aa16.66■□□□□ 0.26
ATG4B-214ENST00000465399 ZNF213O14771 459 aa16.65■□□□□ 0.26
ATG4B-214ENST00000465399 KPNA6O60684 536 aa16.65■□□□□ 0.26
ATG4B-214ENST00000465399 CYP2C9P11712 490 aa16.65■□□□□ 0.26
ATG4B-214ENST00000465399 IGFBP4P22692 258 aa16.65■□□□□ 0.26
ATG4B-214ENST00000465399 EDNRBP24530 442 aa16.65■□□□□ 0.26
ATG4B-214ENST00000465399 USH1GQ495M9 461 aa16.65■□□□□ 0.26
ATG4B-214ENST00000465399 IQCA1Q86XH1 822 aa16.65■□□□□ 0.26
ATG4B-214ENST00000465399 DGKHQ86XP1 1220 aa16.65■□□□□ 0.26
ATG4B-214ENST00000465399 ZKSCAN3Q9BRR0 538 aa16.65■□□□□ 0.26
ATG4B-214ENST00000465399 YBX2Q9Y2T7 364 aaKnown RBP16.65■□□□□ 0.26
ATG4B-214ENST00000465399 CHD9Q3L8U1 2897 aa16.64■□□□□ 0.25
ATG4B-214ENST00000465399 GOLGA8HP0CJ92 632 aa16.64■□□□□ 0.25
ATG4B-214ENST00000465399 TXNP10599 105 aaKnown RBP16.64■□□□□ 0.25
ATG4B-214ENST00000465399 ACTN1P12814 892 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms