RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CXXC1Q9P0U4 656 aaPredicted RBP9.38□□□□□ -0.91
CDC42BPA-210ENST00000462553 CCDC171Q6TFL3 1326 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 MAP3K13O43283 966 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 NMT2O60551 498 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 PLA2G6O60733 806 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 APPP05067 770 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 TSPY3P0CV98 308 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 TSPY8P0CW00 308 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 FDX1P10109 184 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 SMPD1P17405 629 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 SDSP20132 328 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 NOVP48745 357 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 SNAP25P60880 206 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 TFAP4Q01664 338 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 TNFAIP2Q03169 654 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 PDE4BQ07343 736 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 ADGRE1Q14246 886 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 MCMDC2Q4G0Z9 681 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 TJAP1Q5JTD0 557 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 TAPT1Q6NXT6 567 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 CXCL17Q6UXB2 119 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 KCTD1Q719H9 257 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 FAM160B2Q86V87 743 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 SKAP1Q86WV1 359 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 FBXO16Q8IX29 292 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 TMEM199Q8N511 208 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 STAG1Q8WVM7 1258 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 HERVK_113Q902F9 699 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 CHMP4CQ96CF2 233 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 PURBQ96QR8 312 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 NOC4LQ9BVI4 516 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 PRDM12Q9H4Q4 367 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 SPC25Q9HBM1 224 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 ZNF287Q9HBT7 754 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 IL23AQ9NPF7 189 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 INCENPQ9NQS7 918 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 PDGFCQ9NRA1 345 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 IL17RBQ9NRM6 502 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 CYP39A1Q9NYL5 469 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 YBX2Q9Y2T7 364 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 CTDP1Q9Y5B0 961 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 MYH7BA7E2Y1 1941 aa9.37□□□□□ -0.91
CDC42BPA-210ENST00000462553 ZMYM6O95789 1325 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 TRIOO75962 3097 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 ASB14A6NK59 587 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 TLR3O15455 904 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 B4GALT4O60513 344 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 HSPD1P10809 573 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 ALAS1P13196 640 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 MCCP23508 829 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 SLC1A4P43007 532 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 CTDSPL2Q05D32 466 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 ALX1Q15699 326 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 FSCN1Q16658 493 aaKnown RBP9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 TKFCQ3LXA3 575 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 AKNAD1Q5T1N1 836 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 CCDC174Q6PII3 467 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 MORC4Q8TE76 937 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 VTI1AQ96AJ9 217 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 TRERF1Q96PN7 1200 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 NAPBQ9H115 298 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 PRR12Q9ULL5 1215 aa9.36□□□□□ -0.91
CDC42BPA-210ENST00000462553 CABYRO75952 493 aa9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 PSMC6P62333 389 aa9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 ITGA7Q13683 1181 aa9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 CENPQQ7L2Z9 268 aaPredicted RBP9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 EEPD1Q7L9B9 569 aa9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 CHURC1Q8WUH1 139 aa9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 SYMPKQ92797 1274 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 NACAP1Q9BZK3 213 aa9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 TRPV6Q9H1D0 765 aa9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 RANBP17Q9H2T7 1088 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 NKX2-4Q9H2Z4 354 aa9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 HIPK3Q9H422 1215 aa9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 ANAPC4Q9UJX5 808 aa9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 ISY1Q9ULR0 285 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 STX8Q9UNK0 236 aa9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 C5orf42Q9H799 3197 aa9.35□□□□□ -0.91
CDC42BPA-210ENST00000462553 MICAL3Q7RTP6 2002 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 SIP14410 1827 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 NFIBO00712 420 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 DYNC1LI2O43237 492 aaPredicted RBP9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 FGAP02671 866 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 ICAM1P05362 532 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 FGRP09769 529 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 ALDH5A1P51649 535 aaPredicted RBP9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 CCL23P55773 120 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 IKQ13123 557 aaPredicted RBP9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 RAB30Q15771 203 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 RCSD1Q6JBY9 416 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 BTNL9Q6UXG8 535 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 GAS2L1Q99501 681 aaPredicted RBP9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 VTA1Q9NP79 307 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 THEGQ9P2T0 379 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 CCPG1Q9ULG6 757 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 Q9Y3F1 56 aa9.34□□□□□ -0.91
CDC42BPA-210ENST00000462553 ATG2AQ2TAZ0 1938 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 RBM47A0AV96 593 aaKnown RBP9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 TSPY2A6NKD2 308 aa9.33□□□□□ -0.92
CDC42BPA-210ENST00000462553 TNFRSF10AO00220 468 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms