RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 TAL1P17542 331 aaPredicted RBP17.35■□□□□ 0.37
ATG4B-213ENST00000460211 MRPL12P52815 198 aaKnown RBP17.35■□□□□ 0.37
ATG4B-213ENST00000460211 FGD1P98174 961 aa17.35■□□□□ 0.37
ATG4B-213ENST00000460211 ACVR2BQ13705 512 aa17.35■□□□□ 0.37
ATG4B-213ENST00000460211 PWP2Q15269 919 aaKnown RBP17.35■□□□□ 0.37
ATG4B-213ENST00000460211 ARMCX2Q7L311 632 aa17.35■□□□□ 0.37
ATG4B-213ENST00000460211 CCDC144CPQ8IYA2 1237 aa17.35■□□□□ 0.37
ATG4B-213ENST00000460211 RASEFQ8IZ41 740 aa17.35■□□□□ 0.37
ATG4B-213ENST00000460211 RGS22Q8NE09 1264 aa17.35■□□□□ 0.37
ATG4B-213ENST00000460211 CLEC4DQ8WXI8 215 aa17.35■□□□□ 0.37
ATG4B-213ENST00000460211 SOWAHBA6NEL2 793 aa17.34■□□□□ 0.37
ATG4B-213ENST00000460211 MYCNP04198 464 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-213ENST00000460211 ZNF865P0CJ78 1059 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-213ENST00000460211 CALML3P27482 149 aa17.34■□□□□ 0.37
ATG4B-213ENST00000460211 KCNB2Q92953 911 aa17.34■□□□□ 0.37
ATG4B-213ENST00000460211 FGD4Q96M96 766 aa17.34■□□□□ 0.37
ATG4B-213ENST00000460211 GUCD1Q96NT3 240 aa17.34■□□□□ 0.37
ATG4B-213ENST00000460211 COL25A1Q9BXS0 654 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-213ENST00000460211 LRRC2Q9BYS8 371 aa17.34■□□□□ 0.37
ATG4B-213ENST00000460211 RIOX1Q9H6W3 641 aa17.34■□□□□ 0.37
ATG4B-213ENST00000460211 GPHNQ9NQX3 736 aaPredicted RBP17.34■□□□□ 0.37
ATG4B-213ENST00000460211 KBTBD13C9JR72 458 aa17.33■□□□□ 0.36
ATG4B-213ENST00000460211 DNM1LO00429 736 aa17.33■□□□□ 0.36
ATG4B-213ENST00000460211 PSMA5P28066 241 aa17.33■□□□□ 0.36
ATG4B-213ENST00000460211 SMARCA1P28370 1054 aa17.33■□□□□ 0.36
ATG4B-213ENST00000460211 RPS6P62753 249 aaKnown RBP17.33■□□□□ 0.36
ATG4B-213ENST00000460211 ADCK5Q3MIX3 580 aa17.33■□□□□ 0.36
ATG4B-213ENST00000460211 ANO1Q5XXA6 986 aa17.33■□□□□ 0.36
ATG4B-213ENST00000460211 HOMER1Q86YM7 354 aa17.33■□□□□ 0.36
ATG4B-213ENST00000460211 MTMR8Q96EF0 704 aa17.33■□□□□ 0.36
ATG4B-213ENST00000460211 MYL10Q9BUA6 226 aa17.33■□□□□ 0.36
ATG4B-213ENST00000460211 XPNPEP3Q9NQH7 507 aa17.33■□□□□ 0.36
ATG4B-213ENST00000460211 PNMA6FA0A0J9YX94 578 aa17.32■□□□□ 0.36
ATG4B-213ENST00000460211 RTP1P59025 263 aa17.32■□□□□ 0.36
ATG4B-213ENST00000460211 EXOSC10Q01780 885 aaKnown RBP17.32■□□□□ 0.36
ATG4B-213ENST00000460211 GJC2Q5T442 439 aaPredicted RBP17.32■□□□□ 0.36
ATG4B-213ENST00000460211 BLOC1S2Q6QNY1 142 aa17.32■□□□□ 0.36
ATG4B-213ENST00000460211 SLC30A10Q6XR72 485 aa17.32■□□□□ 0.36
ATG4B-213ENST00000460211 RNF180Q86T96 592 aa17.32■□□□□ 0.36
ATG4B-213ENST00000460211 SGMS1Q86VZ5 419 aa17.32■□□□□ 0.36
ATG4B-213ENST00000460211 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.32■□□□□ 0.36
ATG4B-213ENST00000460211 DNERQ8NFT8 737 aa17.32■□□□□ 0.36
ATG4B-213ENST00000460211 JAKMIP1Q96N16 626 aaKnown RBP17.32■□□□□ 0.36
ATG4B-213ENST00000460211 SPC25Q9HBM1 224 aa17.32■□□□□ 0.36
ATG4B-213ENST00000460211 PRKAG2Q9UGJ0 569 aa17.32■□□□□ 0.36
ATG4B-213ENST00000460211 ATP11BQ9Y2G3 1177 aa17.32■□□□□ 0.36
ATG4B-213ENST00000460211 PCDHA1Q9Y5I3 950 aa17.32■□□□□ 0.36
ATG4B-213ENST00000460211 LTBP2Q14767 1821 aa17.31■□□□□ 0.36
ATG4B-213ENST00000460211 ALDH5A1P51649 535 aaPredicted RBP17.31■□□□□ 0.36
ATG4B-213ENST00000460211 SAMD3Q8N6K7 520 aa17.31■□□□□ 0.36
ATG4B-213ENST00000460211 FANCBQ8NB91 859 aa17.31■□□□□ 0.36
ATG4B-213ENST00000460211 RRP36Q96EU6 259 aaKnown RBP17.31■□□□□ 0.36
ATG4B-213ENST00000460211 PIGSQ96S52 555 aa17.31■□□□□ 0.36
ATG4B-213ENST00000460211 SPZ1Q9BXG8 430 aa17.31■□□□□ 0.36
ATG4B-213ENST00000460211 SEC63Q9UGP8 760 aaKnown RBP17.31■□□□□ 0.36
ATG4B-213ENST00000460211 SNX14Q9Y5W7 946 aa17.31■□□□□ 0.36
ATG4B-213ENST00000460211 PLXNA1Q9UIW2 1896 aa17.31■□□□□ 0.36
ATG4B-213ENST00000460211 DUSP11O75319 330 aaKnown RBP17.3■□□□□ 0.36
ATG4B-213ENST00000460211 CCDC144BQ3MJ40 725 aa17.3■□□□□ 0.36
ATG4B-213ENST00000460211 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
ATG4B-213ENST00000460211 MICU3Q86XE3 530 aa17.3■□□□□ 0.36
ATG4B-213ENST00000460211 TCEANC2Q96MN5 208 aa17.3■□□□□ 0.36
ATG4B-213ENST00000460211 USP26Q9BXU7 913 aa17.3■□□□□ 0.36
ATG4B-213ENST00000460211 VTA1Q9NP79 307 aa17.3■□□□□ 0.36
ATG4B-213ENST00000460211 PRDM5Q9NQX1 630 aaPredicted RBP17.3■□□□□ 0.36
ATG4B-213ENST00000460211 RBM28Q9NW13 759 aaKnown RBP17.3■□□□□ 0.36
ATG4B-213ENST00000460211 MAP3K20Q9NYL2 800 aaKnown RBP17.3■□□□□ 0.36
ATG4B-213ENST00000460211 ZBTB43O43298 467 aa17.29■□□□□ 0.36
ATG4B-213ENST00000460211 CYTH3O43739 400 aa17.29■□□□□ 0.36
ATG4B-213ENST00000460211 CFBP00751 764 aa17.29■□□□□ 0.36
ATG4B-213ENST00000460211 PDE4DQ08499 809 aa17.29■□□□□ 0.36
ATG4B-213ENST00000460211 COL9A3Q14050 684 aaPredicted RBP17.29■□□□□ 0.36
ATG4B-213ENST00000460211 LRRC41Q15345 812 aa17.29■□□□□ 0.36
ATG4B-213ENST00000460211 ZNF697Q5TEC3 545 aa17.29■□□□□ 0.36
ATG4B-213ENST00000460211 IQSEC1Q6DN90 963 aa17.29■□□□□ 0.36
ATG4B-213ENST00000460211 FAM109BQ6ICB4 259 aaPredicted RBP17.29■□□□□ 0.36
ATG4B-213ENST00000460211 EEPD1Q7L9B9 569 aa17.29■□□□□ 0.36
ATG4B-213ENST00000460211 MORC4Q8TE76 937 aa17.29■□□□□ 0.36
ATG4B-213ENST00000460211 PIBF1Q8WXW3 757 aa17.29■□□□□ 0.36
ATG4B-213ENST00000460211 PURBQ96QR8 312 aaKnown RBP17.29■□□□□ 0.36
ATG4B-213ENST00000460211 NAP1L2Q9ULW6 460 aaPredicted RBP17.29■□□□□ 0.36
ATG4B-213ENST00000460211 EYSQ5T1H1 3165 aa17.28■□□□□ 0.36
ATG4B-213ENST00000460211 ASTN1O14525 1302 aa17.28■□□□□ 0.36
ATG4B-213ENST00000460211 PGK1P00558 417 aa17.28■□□□□ 0.36
ATG4B-213ENST00000460211 RXRAP19793 462 aa17.28■□□□□ 0.36
ATG4B-213ENST00000460211 TNFAIP2Q03169 654 aa17.28■□□□□ 0.36
ATG4B-213ENST00000460211 APOA5Q6Q788 366 aa17.28■□□□□ 0.36
ATG4B-213ENST00000460211 SYTL5Q8TDW5 730 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-213ENST00000460211 NSUN6Q8TEA1 469 aaKnown RBP17.28■□□□□ 0.36
ATG4B-213ENST00000460211 SMCHD1A6NHR9 2005 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 KLF18A0A0U1RQI7 1052 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 PPP1R11O60927 126 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-213ENST00000460211 CASTP20810 708 aaKnown RBP17.27■□□□□ 0.36
ATG4B-213ENST00000460211 RPS6KB1P23443 525 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 RCAN1P53805 252 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 PPP2R5BQ15173 497 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 SHHQ15465 462 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 RTN1Q16799 776 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 SLC35G1Q2M3R5 365 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 C9orf50Q5SZB4 431 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms