RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 KIF5AQ12840 1032 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 TMC4Q7Z404 712 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 FAM71BQ8TC56 605 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 DISP2A7MBM2 1401 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 POTEDQ86YR6 584 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 RRP36Q96EU6 259 aaKnown RBP21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 CRACR2AQ9BSW2 395 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 ABCA3Q99758 1704 aa21.84■■□□□ 1.09
CNEP1R1-203ENST00000458059 FAM170AA1A519 330 aa21.83■■□□□ 1.09
CNEP1R1-203ENST00000458059 SMCO2A6NFE2 343 aa21.83■■□□□ 1.09
CNEP1R1-203ENST00000458059 NFRKBQ6P4R8 1299 aa21.83■■□□□ 1.09
CNEP1R1-203ENST00000458059 TANGO6Q9C0B7 1094 aa21.83■■□□□ 1.09
CNEP1R1-203ENST00000458059 HPCAL4Q9UM19 191 aa21.83■■□□□ 1.09
CNEP1R1-203ENST00000458059 BUB1O43683 1085 aa21.83■■□□□ 1.08
CNEP1R1-203ENST00000458059 C12orf60Q5U649 245 aa21.83■■□□□ 1.08
CNEP1R1-203ENST00000458059 SRLQ86TD4 932 aa21.83■■□□□ 1.08
CNEP1R1-203ENST00000458059 SECISBP2LQ93073 1101 aaKnown RBP21.83■■□□□ 1.08
CNEP1R1-203ENST00000458059 EHD4Q9H223 541 aa21.83■■□□□ 1.08
CNEP1R1-203ENST00000458059 OR52Z1P0C646 297 aa21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 RNASE9P60153 205 aaKnown RBP21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 SPA17Q15506 151 aa21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 LRRC31Q6UY01 552 aa21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 KIAA0895Q8NCT3 520 aa21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 NLRP3Q96P20 1036 aa21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 SELENOOQ9BVL4 669 aa21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 FRMPD2Q68DX3 1309 aaPredicted RBP21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 A0A1W2PQC6 194 aa21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 SF3B3Q15393 1217 aaKnown RBP21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 MIIPQ5JXC2 388 aa21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 CLEC10AQ8IUN9 316 aa21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 DMGDHQ9UI17 866 aaKnown RBP21.82■■□□□ 1.08
CNEP1R1-203ENST00000458059 AKR1B10O60218 316 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 PCP11498 1178 aaKnown RBP21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 CCNE1P24864 410 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 WDR93Q6P2C0 686 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 SND1Q7KZF4 910 aaKnown RBP eCLIP21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 RRAGAQ7L523 313 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 TBCKQ8TEA7 893 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 SMARCC1Q92922 1105 aaPredicted RBP21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 IFIH1Q9BYX4 1025 aaKnown RBP21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 SEMA6BQ9H3T3 888 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 BARHL2Q9NY43 387 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 TBC1D7Q9P0N9 293 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 DOT1LQ8TEK3 1739 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 POTEMA6NI47 508 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 APBA1Q02410 837 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 GRM4Q14833 912 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 FAM182BQ5T319 152 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 AFAP1L1Q8TED9 768 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 PIGSQ96S52 555 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 LRRC1Q9BTT6 524 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 TTYH3Q9C0H2 523 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 RASSF4Q9H2L5 321 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 ACBD3Q9H3P7 528 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 NLRC4Q9NPP4 1024 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 A0A1B0GUL6 1792 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 FLT1P17948 1338 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 M0R2N6 131 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 SSBP05455 408 aaKnown RBP eCLIP21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 LDHBP07195 334 aaKnown RBP21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 EIF4A3P38919 411 aaKnown RBP21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 ZBED6P86452 979 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 ARID5AQ03989 594 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 PTPROQ16827 1216 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 PSD3Q9NYI0 1048 aa21.81■■□□□ 1.08
CNEP1R1-203ENST00000458059 KCNB1Q14721 858 aa21.8■■□□□ 1.08
CNEP1R1-203ENST00000458059 PAPD7Q5XG87 772 aaKnown RBP21.8■■□□□ 1.08
CNEP1R1-203ENST00000458059 ARHGAP20Q9P2F6 1191 aa21.8■■□□□ 1.08
CNEP1R1-203ENST00000458059 CCDC47Q96A33 483 aaKnown RBP21.79■■□□□ 1.08
CNEP1R1-203ENST00000458059 COA7Q96BR5 231 aa21.79■■□□□ 1.08
CNEP1R1-203ENST00000458059 CCSER1Q9C0I3 900 aa21.79■■□□□ 1.08
CNEP1R1-203ENST00000458059 DGKHQ86XP1 1220 aa21.79■■□□□ 1.08
CNEP1R1-203ENST00000458059 DHTKD1Q96HY7 919 aaPredicted RBP21.79■■□□□ 1.08
CNEP1R1-203ENST00000458059 GFPT1Q06210 699 aaPredicted RBP21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 NONOQ15233 471 aaKnown RBP eCLIP21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 MEA1Q16626 185 aa21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 MS4A14Q96JA4 679 aa21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 SETDB2Q96T68 719 aa21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 NUDT12Q9BQG2 462 aa21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 LRRC53A6NM62 1247 aa21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 CACNB1Q02641 598 aaPredicted RBP21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 NFIXQ14938 502 aa21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 TDRD12Q587J7 1177 aaKnown RBP21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 SALL4Q9UJQ4 1053 aa21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 TDP2O95551 362 aa21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 KIF11P52732 1056 aa21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 CKAP4Q07065 602 aaKnown RBP21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 SOGA3Q5TF21 947 aa21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 MMTAG2Q9BU76 263 aaKnown RBP21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 PCDHA13Q9Y5I0 950 aa21.78■■□□□ 1.08
CNEP1R1-203ENST00000458059 PHLPP1O60346 1717 aa21.77■■□□□ 1.08
CNEP1R1-203ENST00000458059 MYMKA6NI61 221 aa21.77■■□□□ 1.08
CNEP1R1-203ENST00000458059 EIF3CLB5ME19 914 aaKnown RBP21.77■■□□□ 1.08
CNEP1R1-203ENST00000458059 VAV2P52735 878 aa21.77■■□□□ 1.08
CNEP1R1-203ENST00000458059 RASSF7Q02833 373 aa21.77■■□□□ 1.08
CNEP1R1-203ENST00000458059 MAP9Q49MG5 647 aa21.77■■□□□ 1.08
CNEP1R1-203ENST00000458059 SBK1Q52WX2 424 aa21.77■■□□□ 1.08
CNEP1R1-203ENST00000458059 CDK5RAP3Q96JB5 506 aa21.77■■□□□ 1.08
CNEP1R1-203ENST00000458059 EIF3CQ99613 913 aaKnown RBP21.77■■□□□ 1.08
CNEP1R1-203ENST00000458059 MED4Q9NPJ6 270 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms