RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 KSR1Q8IVT5 923 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 MRPL41Q8IXM3 137 aaKnown RBP4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 ENAHQ8N8S7 591 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 ANKRD42Q8N9B4 389 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 THAP3Q8WTV1 239 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 MPP4Q96JB8 637 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 GPR101Q96P66 508 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 SERINC2Q96SA4 455 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 SLC38A3Q99624 504 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 HERPUD2Q9BSE4 406 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 ASPSCR1Q9BZE9 553 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 CDH19Q9H159 772 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 CARS2Q9HA77 564 aaKnown RBP4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 ATP13A1Q9HD20 1204 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 C19orf73Q9NVV2 129 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 C9orf78Q9NZ63 289 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 HDAC9Q9UKV0 1011 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 SH3BP1Q9Y3L3 701 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 CD2APQ9Y5K6 639 aa4.8□□□□□ -1.64
HMGB3P30-201ENST00000457863 CNTNAP4Q9C0A0 1308 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 LRRC10BA6NIK2 292 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 GFRA2O00451 464 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 GLI1P08151 1106 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 MYCLP1P12525 358 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 GRK4P32298 578 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 GDNFP39905 211 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 KIR3DL1P43629 444 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 GPSM2P81274 684 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 CCDC85BQ15834 202 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 GFOD2Q3B7J2 385 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 PRAMEF13Q5VWM6 474 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 ANO1Q5XXA6 986 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 IL31Q6EBC2 164 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 PPP4R3AQ6IN85 833 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 AGMOQ6ZNB7 445 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 ZNF354CQ86Y25 554 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 KIAA0825Q8IV33 1275 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 CELF2-AS1Q8N7Q2 184 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 ATXN2LQ8WWM7 1075 aaKnown RBP4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 SKA1Q96BD8 255 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 CCDC120Q96HB5 630 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 HSPA12BQ96MM6 686 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 CAMKK2Q96RR4 588 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 USP25Q9UHP3 1055 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 EVLQ9UI08 416 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 ACAD8Q9UKU7 415 aa4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 DIS3Q9Y2L1 958 aaKnown RBP4.79□□□□□ -1.64
HMGB3P30-201ENST00000457863 A0A087X0B3 334 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 E2F8A0AVK6 867 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 H3BS24 57 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 PIP5K1CO60331 668 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 MTA2O94776 668 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 TSPAN15O95858 294 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 CYP7A1P22680 504 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 DDIT3P35638 169 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 CDK8P49336 464 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 LIG3P49916 1009 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 NEK3P51956 506 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 FAM160A1Q05DH4 1040 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 SEPT6Q14141 434 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 PUM3Q15397 648 aaKnown RBP4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 KRTAP19-4Q3LI73 84 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 MEI1Q5TIA1 1274 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 FYB2Q5VWT5 728 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 TTLL5Q6EMB2 1281 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 CFAP161Q6P656 301 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 SPOCD1Q6ZMY3 1216 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 MMS22LQ6ZRQ5 1243 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 MORC1Q86VD1 984 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 CILP2Q8IUL8 1156 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 RELL1Q8IUW5 271 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 IFNL2Q8IZJ0 200 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 CLASRPQ8N2M8 674 aaKnown RBP4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 OTUD6BQ8N6M0 293 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 MAGEB6Q8N7X4 407 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 PJA1Q8NG27 643 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 GOLGA1Q92805 767 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 MFSD3Q96ES6 412 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 KIRREL1Q96J84 757 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 PPP1R16BQ96T49 567 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 RTFDC1Q9BY42 306 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 ADAMTS1Q9UHI8 967 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 PGAP2Q9UHJ9 254 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 SYNPO2Q9UMS6 1093 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 IPPQ9Y573 584 aa4.78□□□□□ -1.64
HMGB3P30-201ENST00000457863 A0A1W2PRQ8 180 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 SMAD7O15105 426 aaKnown RBP4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 PRPF3O43395 683 aaKnown RBP4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 FIBPO43427 364 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 KATNA1O75449 491 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 RPN1P04843 607 aaKnown RBP4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 TYRP1P17643 537 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 LMNB1P20700 586 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 SOX5P35711 763 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 APOBRQ0VD83 1088 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 NEXNQ0ZGT2 675 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 PICALMQ13492 652 aa4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 PIN1Q13526 163 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P30-201ENST00000457863 COL9A2Q14055 689 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms