RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 CMTR1Q8N1G2 835 aaKnown RBP11.71□□□□□ -0.53
RFX3-210ENST00000457373 BRF1Q92994 677 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 MAP3K14Q99558 947 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.71□□□□□ -0.53
RFX3-210ENST00000457373 RIOX1Q9H6W3 641 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 A1CFQ9NQ94 594 aaKnown RBP11.71□□□□□ -0.53
RFX3-210ENST00000457373 PNMA2Q9UL42 364 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 DIS3Q9Y2L1 958 aaKnown RBP11.71□□□□□ -0.53
RFX3-210ENST00000457373 CYP46A1Q9Y6A2 500 aa11.71□□□□□ -0.53
RFX3-210ENST00000457373 ABCB11O95342 1321 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 PTPDC1A2A3K4 754 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 ZBTB5O15062 677 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 ZBTB43O43298 467 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 CYTH3O43739 400 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 PLEKHA8P1O95397 391 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 CCND3P30281 292 aaPredicted RBP11.7□□□□□ -0.54
RFX3-210ENST00000457373 GNAQP50148 359 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 CNTN2Q02246 1040 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 DSG2Q14126 1118 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 C8orf34Q49A92 452 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 PRAMEF19Q5SWL8 479 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 OLFML2BQ68BL8 750 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 APOA5Q6Q788 366 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 CCDC82Q8N4S0 544 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 SRBD1Q8N5C6 995 aaKnown RBP11.7□□□□□ -0.54
RFX3-210ENST00000457373 FANCBQ8NB91 859 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 CLEC4DQ8WXI8 215 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 DEFB118Q96PH6 123 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 AMNQ9BXJ7 453 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 UPF3BQ9BZI7 483 aaKnown RBP11.7□□□□□ -0.54
RFX3-210ENST00000457373 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 CYP39A1Q9NYL5 469 aa11.7□□□□□ -0.54
RFX3-210ENST00000457373 RBBP6Q7Z6E9 1792 aaKnown RBP11.69□□□□□ -0.54
RFX3-210ENST00000457373 PFASO15067 1338 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 DNAJC25-GNG10A0A024R161 153 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 GOLGA8AA7E2F4 631 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 GOLGA8BA8MQT2 603 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 SGPL1O95470 568 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 GJB1P08034 283 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 CALML3P27482 149 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 BAATQ14032 418 aaPredicted RBP11.69□□□□□ -0.54
RFX3-210ENST00000457373 MAP3K21Q5TCX8 1036 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 RNF207Q6ZRF8 634 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 TBC1D5Q92609 795 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 MTMR8Q96EF0 704 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 PURBQ96QR8 312 aaKnown RBP11.69□□□□□ -0.54
RFX3-210ENST00000457373 LZTS2Q9BRK4 669 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 TINF2Q9BSI4 451 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 TM6SF1Q9BZW5 370 aa11.69□□□□□ -0.54
RFX3-210ENST00000457373 MRPL11Q9Y3B7 192 aaKnown RBP11.69□□□□□ -0.54
RFX3-210ENST00000457373 MCM3APO60318 1980 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 PNMA6FA0A0J9YX94 578 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 SOWAHBA6NEL2 793 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 PPP1R11O60927 126 aaPredicted RBP11.68□□□□□ -0.54
RFX3-210ENST00000457373 TFRCP02786 760 aaKnown RBP11.68□□□□□ -0.54
RFX3-210ENST00000457373 SMARCA1P28370 1054 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 RTN1Q16799 776 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 SLC30A10Q6XR72 485 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 TMTC3Q6ZXV5 915 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 FAM133AQ8N9E0 248 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 TRPV1Q8NER1 839 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 U2AF1L4Q8WU68 220 aaKnown RBP11.68□□□□□ -0.54
RFX3-210ENST00000457373 RRP36Q96EU6 259 aaKnown RBP11.68□□□□□ -0.54
RFX3-210ENST00000457373 SPZ1Q9BXG8 430 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 ZMYND15Q9H091 742 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 PAK6Q9NQU5 681 aaPredicted RBP11.68□□□□□ -0.54
RFX3-210ENST00000457373 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 RBM28Q9NW13 759 aaKnown RBP11.68□□□□□ -0.54
RFX3-210ENST00000457373 PCDHA1Q9Y5I3 950 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 LCTP09848 1927 aa11.68□□□□□ -0.54
RFX3-210ENST00000457373 hCG_1642624A0A1W2PR95 340 aa11.67□□□□□ -0.54
RFX3-210ENST00000457373 CFBP00751 764 aa11.67□□□□□ -0.54
RFX3-210ENST00000457373 IGHA2P01877 340 aa11.67□□□□□ -0.54
RFX3-210ENST00000457373 CYBAP13498 195 aa11.67□□□□□ -0.54
RFX3-210ENST00000457373 CDC27P30260 824 aa11.67□□□□□ -0.54
RFX3-210ENST00000457373 GJA8P48165 433 aa11.67□□□□□ -0.54
RFX3-210ENST00000457373 METAP2P50579 478 aaKnown RBP eCLIP11.67□□□□□ -0.54
RFX3-210ENST00000457373 ANAPC15P60006 121 aa11.67□□□□□ -0.54
RFX3-210ENST00000457373 RPS6P62753 249 aaKnown RBP11.67□□□□□ -0.54
RFX3-210ENST00000457373 TOB2Q14106 344 aaPredicted RBP11.67□□□□□ -0.54
RFX3-210ENST00000457373 ANO1Q5XXA6 986 aa11.67□□□□□ -0.54
RFX3-210ENST00000457373 MCF2L2Q86YR7 1114 aa11.67□□□□□ -0.54
RFX3-210ENST00000457373 FGD4Q96M96 766 aa11.67□□□□□ -0.54
RFX3-210ENST00000457373 AGXT2Q9BYV1 514 aa11.67□□□□□ -0.54
RFX3-210ENST00000457373 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.67□□□□□ -0.54
RFX3-210ENST00000457373 SEC63Q9UGP8 760 aaKnown RBP11.67□□□□□ -0.54
RFX3-210ENST00000457373 ASB14A6NK59 587 aa11.66□□□□□ -0.54
RFX3-210ENST00000457373 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
RFX3-210ENST00000457373 SNAI1O95863 264 aaPredicted RBP11.66□□□□□ -0.54
RFX3-210ENST00000457373 TIE1P35590 1138 aa11.66□□□□□ -0.54
RFX3-210ENST00000457373 ADD1P35611 737 aaKnown RBP11.66□□□□□ -0.54
RFX3-210ENST00000457373 CCT2P78371 535 aaKnown RBP11.66□□□□□ -0.54
RFX3-210ENST00000457373 TRAF1Q13077 416 aa11.66□□□□□ -0.54
RFX3-210ENST00000457373 MAMDC4Q6UXC1 1216 aa11.66□□□□□ -0.54
RFX3-210ENST00000457373 ARMCX2Q7L311 632 aa11.66□□□□□ -0.54
RFX3-210ENST00000457373 FBXL16Q8N461 479 aa11.66□□□□□ -0.54
RFX3-210ENST00000457373 MSL3Q8N5Y2 521 aaKnown RBP11.66□□□□□ -0.54
RFX3-210ENST00000457373 RGS22Q8NE09 1264 aa11.66□□□□□ -0.54
RFX3-210ENST00000457373 SHISA4Q96DD7 197 aa11.66□□□□□ -0.54
RFX3-210ENST00000457373 TAAR1Q96RJ0 339 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms