RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 RBM47A0AV96 593 aaKnown RBP22.09■■□□□ 1.13
MSH6-206ENST00000455383 TTBK2Q6IQ55 1244 aa22.09■■□□□ 1.13
MSH6-206ENST00000455383 ADD3Q9UEY8 706 aaKnown RBP22.09■■□□□ 1.13
MSH6-206ENST00000455383 CHD7Q9P2D1 2997 aa22.09■■□□□ 1.13
MSH6-206ENST00000455383 MX1P20591 662 aa22.08■■□□□ 1.13
MSH6-206ENST00000455383 ALDH5A1P51649 535 aaPredicted RBP22.08■■□□□ 1.13
MSH6-206ENST00000455383 BAATQ14032 418 aaPredicted RBP22.08■■□□□ 1.13
MSH6-206ENST00000455383 ALX1Q15699 326 aa22.08■■□□□ 1.13
MSH6-206ENST00000455383 VPS53Q5VIR6 699 aa22.08■■□□□ 1.13
MSH6-206ENST00000455383 RANBP6O60518 1105 aaKnown RBP22.07■■□□□ 1.12
MSH6-206ENST00000455383 PFKMP08237 780 aa22.07■■□□□ 1.12
MSH6-206ENST00000455383 RABGGTBP53611 331 aa22.07■■□□□ 1.12
MSH6-206ENST00000455383 MRPS5P82675 430 aaKnown RBP22.07■■□□□ 1.12
MSH6-206ENST00000455383 PURAQ00577 322 aaKnown RBP22.07■■□□□ 1.12
MSH6-206ENST00000455383 SCLYQ96I15 445 aa22.07■■□□□ 1.12
MSH6-206ENST00000455383 WDR11Q9BZH6 1224 aa22.07■■□□□ 1.12
MSH6-206ENST00000455383 POLR3EQ9NVU0 708 aa22.07■■□□□ 1.12
MSH6-206ENST00000455383 PCDHA11Q9Y5I1 949 aa22.07■■□□□ 1.12
MSH6-206ENST00000455383 SLC4A7Q9Y6M7 1214 aa22.07■■□□□ 1.12
MSH6-206ENST00000455383 NFIBO00712 420 aa22.06■■□□□ 1.12
MSH6-206ENST00000455383 SUPT20HL2P0C7V6 817 aa22.06■■□□□ 1.12
MSH6-206ENST00000455383 IGFBP4P22692 258 aa22.06■■□□□ 1.12
MSH6-206ENST00000455383 SLC16A2P36021 539 aa22.06■■□□□ 1.12
MSH6-206ENST00000455383 CCDC85BQ15834 202 aaPredicted RBP22.06■■□□□ 1.12
MSH6-206ENST00000455383 CCDC96Q2M329 555 aa22.06■■□□□ 1.12
MSH6-206ENST00000455383 SYDE2Q5VT97 1194 aa22.06■■□□□ 1.12
MSH6-206ENST00000455383 CLEC4DQ8WXI8 215 aa22.06■■□□□ 1.12
MSH6-206ENST00000455383 TCP11L1Q9NUJ3 509 aa22.06■■□□□ 1.12
MSH6-206ENST00000455383 TRMT13Q9NUP7 481 aaKnown RBP22.06■■□□□ 1.12
MSH6-206ENST00000455383 MYOGP15173 224 aa22.05■■□□□ 1.12
MSH6-206ENST00000455383 ADAMTS19Q8TE59 1207 aa22.05■■□□□ 1.12
MSH6-206ENST00000455383 TMEM47Q9BQJ4 181 aa22.05■■□□□ 1.12
MSH6-206ENST00000455383 MTMR7Q9Y216 660 aa22.05■■□□□ 1.12
MSH6-206ENST00000455383 TNKSO95271 1327 aa22.05■■□□□ 1.12
MSH6-206ENST00000455383 TOP1P11387 765 aaKnown RBP22.04■■□□□ 1.12
MSH6-206ENST00000455383 CYP2C9P11712 490 aa22.04■■□□□ 1.12
MSH6-206ENST00000455383 EDNRBP24530 442 aa22.04■■□□□ 1.12
MSH6-206ENST00000455383 CPT1AP50416 773 aa22.04■■□□□ 1.12
MSH6-206ENST00000455383 TTLL4Q14679 1199 aa22.04■■□□□ 1.12
MSH6-206ENST00000455383 PPP2R2DQ66LE6 453 aa22.04■■□□□ 1.12
MSH6-206ENST00000455383 MTG1Q9BT17 334 aaPredicted RBP22.04■■□□□ 1.12
MSH6-206ENST00000455383 HELLSQ9NRZ9 838 aa22.04■■□□□ 1.12
MSH6-206ENST00000455383 SCN10AQ9Y5Y9 1956 aa22.03■■□□□ 1.12
MSH6-206ENST00000455383 ATP2A2P16615 1042 aaKnown RBP22.03■■□□□ 1.12
MSH6-206ENST00000455383 SLC30A10Q6XR72 485 aa22.03■■□□□ 1.12
MSH6-206ENST00000455383 EVI5LQ96CN4 794 aa22.03■■□□□ 1.12
MSH6-206ENST00000455383 PNMA2Q9UL42 364 aa22.03■■□□□ 1.12
MSH6-206ENST00000455383 PTPDC1A2A3K4 754 aa22.02■■□□□ 1.12
MSH6-206ENST00000455383 NKRFO15226 690 aaKnown RBP eCLIP22.02■■□□□ 1.12
MSH6-206ENST00000455383 MYL3P08590 195 aa22.02■■□□□ 1.12
MSH6-206ENST00000455383 PDHBP11177 359 aa22.02■■□□□ 1.12
MSH6-206ENST00000455383 POU3F3P20264 500 aaPredicted RBP22.02■■□□□ 1.12
MSH6-206ENST00000455383 COL9A1P20849 921 aa22.02■■□□□ 1.12
MSH6-206ENST00000455383 FRMPD2Q68DX3 1309 aaPredicted RBP22.02■■□□□ 1.12
MSH6-206ENST00000455383 ZBBXA8MT70 800 aa22.01■■□□□ 1.11
MSH6-206ENST00000455383 FGAP02671 866 aa22.01■■□□□ 1.11
MSH6-206ENST00000455383 SNHG28P0DPA3 235 aa22.01■■□□□ 1.11
MSH6-206ENST00000455383 RFC2P35250 354 aa22.01■■□□□ 1.11
MSH6-206ENST00000455383 NBPF20Q3BBV1 942 aa22.01■■□□□ 1.11
MSH6-206ENST00000455383 NFRKBQ6P4R8 1299 aa22.01■■□□□ 1.11
MSH6-206ENST00000455383 RNF207Q6ZRF8 634 aa22.01■■□□□ 1.11
MSH6-206ENST00000455383 OR6J1Q8NGC5 347 aa22.01■■□□□ 1.11
MSH6-206ENST00000455383 UHRF1Q96T88 793 aaPredicted RBP22.01■■□□□ 1.11
MSH6-206ENST00000455383 GPCPD1Q9NPB8 672 aa22.01■■□□□ 1.11
MSH6-206ENST00000455383 WDR19Q8NEZ3 1342 aa22.01■■□□□ 1.11
MSH6-206ENST00000455383 A6NJR5 290 aa22■■□□□ 1.11
MSH6-206ENST00000455383 KPNA6O60684 536 aa22■■□□□ 1.11
MSH6-206ENST00000455383 CALML3P27482 149 aa22■■□□□ 1.11
MSH6-206ENST00000455383 RPS6P62753 249 aaKnown RBP22■■□□□ 1.11
MSH6-206ENST00000455383 TICAM2Q86XR7 235 aa22■■□□□ 1.11
MSH6-206ENST00000455383 DNERQ8NFT8 737 aa22■■□□□ 1.11
MSH6-206ENST00000455383 TTC14Q96N46 770 aa22■■□□□ 1.11
MSH6-206ENST00000455383 ZMYM6O95789 1325 aa22■■□□□ 1.11
MSH6-206ENST00000455383 PITPNM1O00562 1244 aa21.99■■□□□ 1.11
MSH6-206ENST00000455383 BMP1P13497 986 aa21.99■■□□□ 1.11
MSH6-206ENST00000455383 PTPN11Q06124 597 aaPredicted RBP21.99■■□□□ 1.11
MSH6-206ENST00000455383 ZNF543Q08ER8 600 aa21.99■■□□□ 1.11
MSH6-206ENST00000455383 PPP2R5BQ15173 497 aa21.99■■□□□ 1.11
MSH6-206ENST00000455383 BRDTQ58F21 947 aaPredicted RBP21.99■■□□□ 1.11
MSH6-206ENST00000455383 TMEM67Q5HYA8 995 aa21.99■■□□□ 1.11
MSH6-206ENST00000455383 DEFB128Q7Z7B8 93 aa21.99■■□□□ 1.11
MSH6-206ENST00000455383 PHOSPHO2Q8TCD6 241 aa21.99■■□□□ 1.11
MSH6-206ENST00000455383 SCFD2Q8WU76 684 aa21.99■■□□□ 1.11
MSH6-206ENST00000455383 TSPYL2Q9H2G4 693 aaPredicted RBP21.99■■□□□ 1.11
MSH6-206ENST00000455383 GPHNQ9NQX3 736 aaPredicted RBP21.99■■□□□ 1.11
MSH6-206ENST00000455383 SCN5AQ14524 2016 aa21.99■■□□□ 1.11
MSH6-206ENST00000455383 NCOR1O75376 2440 aa21.98■■□□□ 1.11
MSH6-206ENST00000455383 IQCF3P0C7M6 154 aa21.98■■□□□ 1.11
MSH6-206ENST00000455383 ACTN1P12814 892 aa21.98■■□□□ 1.11
MSH6-206ENST00000455383 PDE4DQ08499 809 aa21.98■■□□□ 1.11
MSH6-206ENST00000455383 MCMDC2Q4G0Z9 681 aa21.98■■□□□ 1.11
MSH6-206ENST00000455383 RRP12Q5JTH9 1297 aaKnown RBP21.98■■□□□ 1.11
MSH6-206ENST00000455383 RGS22Q8NE09 1264 aa21.98■■□□□ 1.11
MSH6-206ENST00000455383 COPS5Q92905 334 aa21.98■■□□□ 1.11
MSH6-206ENST00000455383 FAM227BQ96M60 508 aa21.98■■□□□ 1.11
MSH6-206ENST00000455383 SLC9A7Q96T83 725 aa21.98■■□□□ 1.11
MSH6-206ENST00000455383 TOMM22Q9NS69 142 aa21.98■■□□□ 1.11
MSH6-206ENST00000455383 RAD50Q92878 1312 aa21.98■■□□□ 1.11
MSH6-206ENST00000455383 REV3LO60673 3130 aa21.97■■□□□ 1.11
MSH6-206ENST00000455383 A0A0D9SFI3 127 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 191.7 ms