RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 WDR45BQ5MNZ6 344 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 THEMIS2Q5TEJ8 643 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 FBXW10Q5XX13 1052 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 CREB3L3Q68CJ9 461 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 ERAP2Q6P179 960 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 SLC4A10Q6U841 1118 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 CWC27Q6UX04 472 aaKnown RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 CEP68Q76N32 757 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 RASSF3Q86WH2 238 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 ZNF397Q8NF99 534 aaPredicted RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 OR8K1Q8NGG5 319 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 SCG3Q8WXD2 468 aaKnown RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 E2F7Q96AV8 911 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 SKA1Q96BD8 255 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 SPDL1Q96EA4 605 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 C8orf76Q96K31 380 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 RABEP2Q9H5N1 569 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 SCUBE2Q9NQ36 999 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 ABCF3Q9NUQ8 709 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 ARGLU1Q9NWB6 273 aaPredicted RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 PAIP2BQ9ULR5 123 aaKnown RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 DNMT3AQ9Y6K1 912 aaPredicted RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 ADGBQ8N7X0 1667 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 NUP153P49790 1475 aaKnown RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 SHANK2Q9UPX8 1470 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 INSRP06213 1382 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 ANKRD30AQ9BXX3 1397 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 GOLGA6L4A6NEF3 574 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 USP17L5A8MUK1 530 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 TTI1O43156 1089 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 TSPAN1O60635 241 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 DIAPH2O60879 1101 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 IL33O95760 270 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 FESP07332 822 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 PARP1P09874 1014 aaKnown RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 SKIP12755 728 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 FERP16591 822 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 CYP4A11Q02928 519 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 FKBP5Q13451 457 aaPredicted RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 SF3B3Q15393 1217 aaKnown RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 DIXDC1Q155Q3 683 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 SLC10A5Q5PT55 438 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 SLC30A9Q6PML9 568 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 CCDC129Q6ZRS4 1044 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 FAM9CQ8IZT9 166 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 GTF3C2Q8WUA4 911 aaPredicted RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 JPH3Q8WXH2 748 aaPredicted RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 AP1M1Q9BXS5 423 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 OXCT2Q9BYC2 517 aaPredicted RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 GLT8D2Q9H1C3 349 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 ANTXR1Q9H6X2 564 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 C9orf78Q9NZ63 289 aaPredicted RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 LUZP4Q9P127 313 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 ZC3H7BQ9UGR2 993 aaKnown RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 ITGB1BP2Q9UKP3 347 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 KIAA1257Q9ULG3 409 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 PA2G4Q9UQ80 394 aaKnown RBP5.52□□□□□ -1.53
EPHA3-202ENST00000452448 SLC4A4Q9Y6R1 1079 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 RAPGEF6Q8TEU7 1601 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 CAMSAP2Q08AD1 1489 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 STRCQ7RTU9 1775 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 NPC1L1Q9UHC9 1359 aa5.52□□□□□ -1.53
EPHA3-202ENST00000452448 A0A087WUV0 522 aaPredicted RBP5.51□□□□□ -1.53
EPHA3-202ENST00000452448 ESYT3A0FGR9 886 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 TSPY2A6NKD2 308 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 TTC34A8MYJ7 566 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 PRRT4C9JH25 899 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 NR1I2O75469 434 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 RNF8O76064 485 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 RHOBTB3O94955 611 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 ARIH2O95376 493 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 TSPY3P0CV98 308 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 TSPY8P0CW00 308 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 PNMA6AP0CW24 399 aaPredicted RBP5.51□□□□□ -1.53
EPHA3-202ENST00000452448 RAC2P15153 192 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 TNFAIP3P21580 790 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 MCM3P25205 808 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 DNAJB2P25686 324 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 SOX11P35716 441 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 GCLCP48506 637 aaPredicted RBP5.51□□□□□ -1.53
EPHA3-202ENST00000452448 TSPY1Q01534 308 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 KCNB1Q14721 858 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 COG2Q14746 738 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 TNIP1Q15025 636 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 TTF1Q15361 905 aaPredicted RBP5.51□□□□□ -1.53
EPHA3-202ENST00000452448 FAM133BQ5BKY9 247 aaKnown RBP5.51□□□□□ -1.53
EPHA3-202ENST00000452448 RNF19BQ6ZMZ0 732 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 CENPQQ7L2Z9 268 aaPredicted RBP5.51□□□□□ -1.53
EPHA3-202ENST00000452448 TMC4Q7Z404 712 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 NPLOC4Q8TAT6 608 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 RELTQ969Z4 430 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 DTNBP1Q96EV8 351 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 TTPALQ9BTX7 342 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 POLMQ9NP87 494 aaPredicted RBP5.51□□□□□ -1.53
EPHA3-202ENST00000452448 HPS4Q9NQG7 708 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 TCP11L1Q9NUJ3 509 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 SNTG2Q9NY99 539 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 CNTN3Q9P232 1028 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 KDM5CP41229 1560 aa5.51□□□□□ -1.53
EPHA3-202ENST00000452448 DISP1Q96F81 1524 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms