RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 C7orf61Q8IZ16 206 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 TMTC2Q8N394 836 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 SYTL5Q8TDW5 730 aaPredicted RBP16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 TMEM87BQ96K49 555 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 GDF15Q99988 308 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 COL20A1Q9P218 1284 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 ADD3Q9UEY8 706 aaKnown RBP16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 FRMPD3Q5JV73 1810 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 ABCB11O95342 1321 aa16.39■□□□□ 0.21
RTFDC1-204ENST00000449062 SMPD1P17405 629 aa16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 CALML3P27482 149 aa16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 TNFAIP2Q03169 654 aa16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 KCNA10Q16322 511 aa16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 ADCK5Q3MIX3 580 aa16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 CHRDL2Q6WN34 429 aa16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 CATIPQ7Z7H3 387 aa16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 DNERQ8NFT8 737 aa16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 FERMT2Q96AC1 680 aa16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 AMNQ9BXJ7 453 aa16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 VTA1Q9NP79 307 aa16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 ZMYND8Q9ULU4 1186 aaPredicted RBP16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 LCTP09848 1927 aa16.38■□□□□ 0.21
RTFDC1-204ENST00000449062 PTGS1P23219 599 aa16.37■□□□□ 0.21
RTFDC1-204ENST00000449062 SMARCA1P28370 1054 aa16.37■□□□□ 0.21
RTFDC1-204ENST00000449062 ACLYP53396 1101 aa16.37■□□□□ 0.21
RTFDC1-204ENST00000449062 SGMS1Q86VZ5 419 aa16.37■□□□□ 0.21
RTFDC1-204ENST00000449062 ZNF654Q8IZM8 581 aa16.37■□□□□ 0.21
RTFDC1-204ENST00000449062 TAAR1Q96RJ0 339 aa16.37■□□□□ 0.21
RTFDC1-204ENST00000449062 PIGSQ96S52 555 aa16.37■□□□□ 0.21
RTFDC1-204ENST00000449062 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
RTFDC1-204ENST00000449062 MRPL11Q9Y3B7 192 aaKnown RBP16.37■□□□□ 0.21
RTFDC1-204ENST00000449062 LAMA3Q16787 3333 aa16.37■□□□□ 0.21
RTFDC1-204ENST00000449062 PNMA6FA0A0J9YX94 578 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 DDAH1O94760 285 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 MYCNP04198 464 aaPredicted RBP16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 HSD17B4P51659 736 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 RTP1P59025 263 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 RNF20Q5VTR2 975 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 CASC1Q6TDU7 716 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 EEPD1Q7L9B9 569 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 MCF2L2Q86YR7 1114 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 FBXO16Q8IX29 292 aaPredicted RBP16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 NEK1Q96PY6 1258 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 MYL10Q9BUA6 226 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 PCDH10Q9P2E7 1040 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 Q9Y3F1 56 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 PCDHA1Q9Y5I3 950 aa16.36■□□□□ 0.21
RTFDC1-204ENST00000449062 A0A1W2PQ45 241 aaPredicted RBP16.35■□□□□ 0.21
RTFDC1-204ENST00000449062 A0A1W2PQY0 241 aa16.35■□□□□ 0.21
RTFDC1-204ENST00000449062 MOXD2PA6NHM9 499 aa16.35■□□□□ 0.21
RTFDC1-204ENST00000449062 DHX16O60231 1041 aaKnown RBP16.35■□□□□ 0.21
RTFDC1-204ENST00000449062 SYN1P17600 705 aa16.35■□□□□ 0.21
RTFDC1-204ENST00000449062 BMP8BP34820 402 aa16.35■□□□□ 0.21
RTFDC1-204ENST00000449062 CDK7P50613 346 aa16.35■□□□□ 0.21
RTFDC1-204ENST00000449062 DUSP28Q4G0W2 176 aa16.35■□□□□ 0.21
RTFDC1-204ENST00000449062 DHX32Q7L7V1 743 aaKnown RBP16.35■□□□□ 0.21
RTFDC1-204ENST00000449062 SPZ1Q9BXG8 430 aa16.35■□□□□ 0.21
RTFDC1-204ENST00000449062 LRRC2Q9BYS8 371 aa16.35■□□□□ 0.21
RTFDC1-204ENST00000449062 C6orf222P0C671 652 aaPredicted RBP16.34■□□□□ 0.21
RTFDC1-204ENST00000449062 HSPA4P34932 840 aa16.34■□□□□ 0.21
RTFDC1-204ENST00000449062 TLE2Q04725 743 aa16.34■□□□□ 0.21
RTFDC1-204ENST00000449062 TRIM60Q495X7 471 aa16.34■□□□□ 0.21
RTFDC1-204ENST00000449062 GNASQ5JWF2 1037 aa16.34■□□□□ 0.21
RTFDC1-204ENST00000449062 SRBD1Q8N5C6 995 aaKnown RBP16.34■□□□□ 0.21
RTFDC1-204ENST00000449062 SAMD3Q8N6K7 520 aa16.34■□□□□ 0.21
RTFDC1-204ENST00000449062 NUP133Q8WUM0 1156 aa16.34■□□□□ 0.21
RTFDC1-204ENST00000449062 MAP3K20Q9NYL2 800 aaKnown RBP16.34■□□□□ 0.21
RTFDC1-204ENST00000449062 ELP1O95163 1332 aa16.34■□□□□ 0.21
RTFDC1-204ENST00000449062 DYNC1LI2O43237 492 aaPredicted RBP16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 ASGR1P07306 291 aa16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 MAGEA10P43363 369 aaPredicted RBP16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 BEX3Q00994 111 aa16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 CCDC62Q6P9F0 684 aa16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 FANCBQ8NB91 859 aa16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 PCSK9Q8NBP7 692 aaKnown RBP16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 NSUN6Q8TEA1 469 aaKnown RBP16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 IWS1Q96ST2 819 aa16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 RMDN3Q96TC7 470 aa16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 LZTS2Q9BRK4 669 aa16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 BRPF3Q9ULD4 1205 aa16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 ATP11BQ9Y2G3 1177 aa16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 SNX14Q9Y5W7 946 aa16.33■□□□□ 0.2
RTFDC1-204ENST00000449062 SZT2Q5T011 3432 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 TRIM43BA6NCK2 446 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 PLEKHA8P1O95397 391 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 KIF5BP33176 963 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 FXR1P51114 621 aaKnown RBP eCLIP16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 PDE4DQ08499 809 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 KRT32Q14532 448 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 ANKRD33Q7Z3H0 272 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 SH3RF1Q7Z6J0 888 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 TLK2Q86UE8 772 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 HOMER1Q86YM7 354 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 SLC43A3Q8NBI5 491 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 CTCFLQ8NI51 663 aaPredicted RBP16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 TRIM43Q96BQ3 446 aaPredicted RBP16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 TCEANC2Q96MN5 208 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 TOX2Q96NM4 488 aa16.32■□□□□ 0.2
RTFDC1-204ENST00000449062 SPC25Q9HBM1 224 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms