RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 GGCXP38435 758 aa9.4□□□□□ -0.9
CPSF7-206ENST00000448745 SWT1Q5T5J6 900 aaKnown RBP9.4□□□□□ -0.9
CPSF7-206ENST00000448745 PDXDC2PQ6P474 469 aa9.4□□□□□ -0.9
CPSF7-206ENST00000448745 CCDC91Q7Z6B0 441 aa9.4□□□□□ -0.9
CPSF7-206ENST00000448745 MICALL1Q8N3F8 863 aa9.4□□□□□ -0.9
CPSF7-206ENST00000448745 MAGEB6Q8N7X4 407 aa9.4□□□□□ -0.9
CPSF7-206ENST00000448745 SPATA5Q8NB90 893 aa9.4□□□□□ -0.9
CPSF7-206ENST00000448745 AENQ8WTP8 325 aaKnown RBP9.4□□□□□ -0.9
CPSF7-206ENST00000448745 FAM84BQ96KN1 310 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-206ENST00000448745 GPR101Q96P66 508 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-206ENST00000448745 MYCBPQ99417 103 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-206ENST00000448745 CHP1Q99653 195 aa9.4□□□□□ -0.9
CPSF7-206ENST00000448745 ARMT1Q9H993 441 aa9.4□□□□□ -0.9
CPSF7-206ENST00000448745 COL4A5P29400 1685 aa9.4□□□□□ -0.91
CPSF7-206ENST00000448745 GSG1L2A8MUP6 293 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 MYL1P05976 194 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 PARP1P09874 1014 aaKnown RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 EPB41P11171 864 aaKnown RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 CASP1P29466 404 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 CDC25AP30304 524 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 PHKA1P46020 1223 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 DNM2P50570 870 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 CDK17Q00537 523 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 ZNF174Q15697 407 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 MEA1Q16626 185 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 DALRD3Q5D0E6 543 aaKnown RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 ALS2CLQ60I27 953 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 CC2D2BQ6DHV5 1058 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 ZNF572Q7Z3I7 529 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 CATIPQ7Z7H3 387 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 FAM114A1Q8IWE2 563 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 ESR2Q92731 530 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 CEP89Q96ST8 783 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 NCAPGQ9BPX3 1015 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 CAPS2Q9BXY5 557 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 VPS54Q9P1Q0 977 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 ANKIB1Q9P2G1 1089 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 LEMD3Q9Y2U8 911 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 SLC4A4Q9Y6R1 1079 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 ZNF646O15015 1829 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 LAMB1P07942 1786 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 TTC26A0AVF1 554 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 FAM205CA6NFA0 338 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 RNF225M0QZC1 329 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 EIF3HO15372 352 aaKnown RBP eCLIP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 USO1O60763 962 aaKnown RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 UFL1O94874 794 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 ABL1P00519 1130 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 IDEP14735 1019 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 TNFRSF8P28908 595 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 LONP1P36776 959 aaKnown RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 PPP1R2P41236 205 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 GYG1P46976 350 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 IRAK1P51617 712 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 SKOR1P84550 965 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 SETQ01105 290 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 APBA1Q02410 837 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 KCNB1Q14721 858 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 B4GALNT4Q76KP1 1039 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 FBXO33Q7Z6M2 555 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 TNFRSF25Q93038 417 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 CAPZA3Q96KX2 299 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 RUFY1Q96T51 708 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 ZKSCAN3Q9BRR0 538 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 BLZF1Q9H2G9 400 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 KAT14Q9H8E8 782 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 INCENPQ9NQS7 918 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 GNL3LQ9NVN8 582 aaKnown RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 ZNF219Q9P2Y4 722 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 HDAC6Q9UBN7 1215 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 TRIM10Q9UDY6 481 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 TACC3Q9Y6A5 838 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 SCN9AQ15858 1988 aa9.39□□□□□ -0.91
CPSF7-206ENST00000448745 COL1A1P02452 1464 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-206ENST00000448745 TNKSO95271 1327 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 AGPSO00116 658 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 NFKBIEO00221 500 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 ENC1O14682 589 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 PSMA7O14818 248 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 TACC1O75410 805 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 DDAH1O94760 285 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 PRLRP16471 622 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 ATP2B4P23634 1241 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 STAT6P42226 847 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 CCT5P48643 541 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 BCAMP50895 628 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 PRELPP51888 382 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 VAV2P52735 878 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 ZBED6P86452 979 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 PPARAQ07869 468 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 KIF5AQ12840 1032 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 PTGDRQ13258 359 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 NNTQ13423 1086 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 SEC23AQ15436 765 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 PKN1Q16512 942 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 ARL6IP4Q66PJ3 421 aaKnown RBP9.38□□□□□ -0.91
CPSF7-206ENST00000448745 EMBQ6PCB8 327 aa9.38□□□□□ -0.91
CPSF7-206ENST00000448745 DPP8Q6V1X1 898 aaPredicted RBP9.38□□□□□ -0.91
CPSF7-206ENST00000448745 ADSSL1Q8N142 457 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms