RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 ABCB11O95342 1321 aa18.19■□□□□ 0.5
HMGB2-203ENST00000446922 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.18■□□□□ 0.5
HMGB2-203ENST00000446922 NKRFO15226 690 aaKnown RBP eCLIP18.18■□□□□ 0.5
HMGB2-203ENST00000446922 PQBP1O60828 265 aaKnown RBP18.18■□□□□ 0.5
HMGB2-203ENST00000446922 GOLGA8HP0CJ92 632 aa18.18■□□□□ 0.5
HMGB2-203ENST00000446922 SMPD1P17405 629 aa18.18■□□□□ 0.5
HMGB2-203ENST00000446922 EDNRBP24530 442 aa18.18■□□□□ 0.5
HMGB2-203ENST00000446922 RPS6P62753 249 aaKnown RBP18.18■□□□□ 0.5
HMGB2-203ENST00000446922 SEC23AQ15436 765 aa18.18■□□□□ 0.5
HMGB2-203ENST00000446922 FSCN1Q16658 493 aaKnown RBP18.18■□□□□ 0.5
HMGB2-203ENST00000446922 KIAA1211Q6ZU35 1233 aa18.18■□□□□ 0.5
HMGB2-203ENST00000446922 MCF2L2Q86YR7 1114 aa18.18■□□□□ 0.5
HMGB2-203ENST00000446922 ADGRF4Q8IZF3 695 aa18.18■□□□□ 0.5
HMGB2-203ENST00000446922 SLC43A3Q8NBI5 491 aa18.18■□□□□ 0.5
HMGB2-203ENST00000446922 UBA5Q9GZZ9 404 aa18.18■□□□□ 0.5
HMGB2-203ENST00000446922 IL25Q9H293 177 aa18.18■□□□□ 0.5
HMGB2-203ENST00000446922 TLR3O15455 904 aaKnown RBP18.17■□□□□ 0.5
HMGB2-203ENST00000446922 SGSM2O43147 1006 aa18.17■□□□□ 0.5
HMGB2-203ENST00000446922 DYNC1LI2O43237 492 aaPredicted RBP18.17■□□□□ 0.5
HMGB2-203ENST00000446922 TIMP1P01033 207 aa18.17■□□□□ 0.5
HMGB2-203ENST00000446922 TRAF1Q13077 416 aa18.17■□□□□ 0.5
HMGB2-203ENST00000446922 DEFB123Q8N688 67 aa18.17■□□□□ 0.5
HMGB2-203ENST00000446922 SAMD3Q8N6K7 520 aa18.17■□□□□ 0.5
HMGB2-203ENST00000446922 PDGFCQ9NRA1 345 aa18.17■□□□□ 0.5
HMGB2-203ENST00000446922 MAP3K20Q9NYL2 800 aaKnown RBP18.17■□□□□ 0.5
HMGB2-203ENST00000446922 LAMA2P24043 3122 aaKnown RBP18.16■□□□□ 0.5
HMGB2-203ENST00000446922 CYP21A2P08686 494 aa18.16■□□□□ 0.5
HMGB2-203ENST00000446922 CALML3P27482 149 aa18.16■□□□□ 0.5
HMGB2-203ENST00000446922 PDE4DQ08499 809 aa18.16■□□□□ 0.5
HMGB2-203ENST00000446922 SHHQ15465 462 aa18.16■□□□□ 0.5
HMGB2-203ENST00000446922 CDC37Q16543 378 aaPredicted RBP18.16■□□□□ 0.5
HMGB2-203ENST00000446922 FBXO16Q8IX29 292 aaPredicted RBP18.16■□□□□ 0.5
HMGB2-203ENST00000446922 MAP4K1Q92918 833 aa18.16■□□□□ 0.5
HMGB2-203ENST00000446922 WDR11Q9BZH6 1224 aa18.16■□□□□ 0.5
HMGB2-203ENST00000446922 TBX21Q9UL17 535 aa18.16■□□□□ 0.5
HMGB2-203ENST00000446922 MRPL11Q9Y3B7 192 aaKnown RBP18.16■□□□□ 0.5
HMGB2-203ENST00000446922 ERICH2A1L162 156 aa18.15■□□□□ 0.5
HMGB2-203ENST00000446922 IRX5P78411 483 aaPredicted RBP18.15■□□□□ 0.5
HMGB2-203ENST00000446922 PTH1RQ03431 593 aa18.15■□□□□ 0.5
HMGB2-203ENST00000446922 FPGSQ05932 587 aa18.15■□□□□ 0.5
HMGB2-203ENST00000446922 SART3Q15020 963 aaKnown RBP18.15■□□□□ 0.5
HMGB2-203ENST00000446922 BRDTQ58F21 947 aaPredicted RBP18.15■□□□□ 0.5
HMGB2-203ENST00000446922 MFSD5Q6N075 450 aa18.15■□□□□ 0.5
HMGB2-203ENST00000446922 SLC30A10Q6XR72 485 aa18.15■□□□□ 0.5
HMGB2-203ENST00000446922 FBXO11Q86XK2 927 aa18.15■□□□□ 0.5
HMGB2-203ENST00000446922 NCOA7Q8NI08 942 aa18.15■□□□□ 0.5
HMGB2-203ENST00000446922 SCFD2Q8WU76 684 aa18.15■□□□□ 0.5
HMGB2-203ENST00000446922 PURBQ96QR8 312 aaKnown RBP18.15■□□□□ 0.5
HMGB2-203ENST00000446922 IWS1Q96ST2 819 aa18.15■□□□□ 0.5
HMGB2-203ENST00000446922 MTA3Q9BTC8 594 aa18.15■□□□□ 0.5
HMGB2-203ENST00000446922 JMJD4Q9H9V9 463 aa18.15■□□□□ 0.5
HMGB2-203ENST00000446922 POLR3EQ9NVU0 708 aa18.15■□□□□ 0.5
HMGB2-203ENST00000446922 LCTP09848 1927 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 KLRF2D3W0D1 207 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 KPNA6O60684 536 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 CD4P01730 458 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 ITGB8P26012 769 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 CPT1AP50416 773 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 IRX6P78412 446 aaPredicted RBP18.14■□□□□ 0.49
HMGB2-203ENST00000446922 SMAD3P84022 425 aaKnown RBP18.14■□□□□ 0.49
HMGB2-203ENST00000446922 BEX3Q00994 111 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 ITGA7Q13683 1181 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 USH1GQ495M9 461 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 CYB5R4Q7L1T6 521 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 EEPD1Q7L9B9 569 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 FAM126BQ8IXS8 530 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 MTMR8Q96EF0 704 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 MTMR10Q9NXD2 777 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 LRRC37A2A6NM11 1700 aa18.14■□□□□ 0.49
HMGB2-203ENST00000446922 PALM3A6NDB9 673 aaPredicted RBP18.13■□□□□ 0.49
HMGB2-203ENST00000446922 GHRHRQ02643 423 aa18.13■□□□□ 0.49
HMGB2-203ENST00000446922 PPIGQ13427 754 aaKnown RBP eCLIP18.13■□□□□ 0.496e-6■□□□□ 9.4
HMGB2-203ENST00000446922 QRICH1Q2TAL8 776 aa18.13■□□□□ 0.49
HMGB2-203ENST00000446922 CXCL17Q6UXB2 119 aa18.13■□□□□ 0.49
HMGB2-203ENST00000446922 RALYLQ86SE5 291 aaKnown RBP18.13■□□□□ 0.49
HMGB2-203ENST00000446922 NSUN6Q8TEA1 469 aaKnown RBP18.13■□□□□ 0.49
HMGB2-203ENST00000446922 AMNQ9BXJ7 453 aa18.13■□□□□ 0.49
HMGB2-203ENST00000446922 E7EWF7 191 aa18.12■□□□□ 0.49
HMGB2-203ENST00000446922 IFIT3O14879 490 aaKnown RBP18.12■□□□□ 0.49
HMGB2-203ENST00000446922 DHX16O60231 1041 aaKnown RBP18.12■□□□□ 0.49
HMGB2-203ENST00000446922 C9orf50Q5SZB4 431 aa18.12■□□□□ 0.49
HMGB2-203ENST00000446922 TMEM199Q8N511 208 aa18.12■□□□□ 0.49
HMGB2-203ENST00000446922 SYTL5Q8TDW5 730 aaPredicted RBP18.12■□□□□ 0.49
HMGB2-203ENST00000446922 MAP3K14Q99558 947 aa18.12■□□□□ 0.49
HMGB2-203ENST00000446922 CPVLQ9H3G5 476 aa18.12■□□□□ 0.49
HMGB2-203ENST00000446922 MAD2L2Q9UI95 211 aa18.12■□□□□ 0.49
HMGB2-203ENST00000446922 STXBP5LQ9Y2K9 1186 aa18.12■□□□□ 0.49
HMGB2-203ENST00000446922 ZBTB5O15062 677 aa18.11■□□□□ 0.49
HMGB2-203ENST00000446922 TTLL4Q14679 1199 aa18.11■□□□□ 0.49
HMGB2-203ENST00000446922 PPP2R5BQ15173 497 aa18.11■□□□□ 0.49
HMGB2-203ENST00000446922 STXBP2Q15833 593 aa18.11■□□□□ 0.49
HMGB2-203ENST00000446922 TMTC2Q8N394 836 aa18.11■□□□□ 0.49
HMGB2-203ENST00000446922 STAG2Q8N3U4 1231 aa18.11■□□□□ 0.49
HMGB2-203ENST00000446922 RIOX1Q9H6W3 641 aa18.11■□□□□ 0.49
HMGB2-203ENST00000446922 VAT1LQ9HCJ6 419 aa18.11■□□□□ 0.49
HMGB2-203ENST00000446922 DDX49Q9Y6V7 483 aaKnown RBP18.11■□□□□ 0.49
HMGB2-203ENST00000446922 GRIN2DO15399 1336 aa18.1■□□□□ 0.49
HMGB2-203ENST00000446922 TMEM265A0A087WTH1 108 aa18.1■□□□□ 0.49
HMGB2-203ENST00000446922 A6NJR5 290 aa18.1■□□□□ 0.49
HMGB2-203ENST00000446922 SUPT20HL2P0C7V6 817 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms