RNA–Protein interactions for RNA: ENST00000446593.1

LINC01880-201, Transcript of long intergenic non-protein coding RNA 1880, humanhuman

TSL 4 BASIC

Gene LINC01880, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01880-201ENST00000446593 ERC1Q8IUD2 1116 aa6.97□□□□□ -1.29
LINC01880-201ENST00000446593 FRAT1Q92837 279 aaPredicted RBP6.97□□□□□ -1.29
LINC01880-201ENST00000446593 KIFC2Q96AC6 838 aa6.97□□□□□ -1.29
LINC01880-201ENST00000446593 FBXL18Q96ME1 805 aa6.97□□□□□ -1.29
LINC01880-201ENST00000446593 RAVER2Q9HCJ3 691 aaKnown RBP6.97□□□□□ -1.29
LINC01880-201ENST00000446593 POLR3EQ9NVU0 708 aa6.97□□□□□ -1.29
LINC01880-201ENST00000446593 NYAP2Q9P242 653 aa6.97□□□□□ -1.29
LINC01880-201ENST00000446593 RCAN3Q9UKA8 241 aa6.97□□□□□ -1.29
LINC01880-201ENST00000446593 FAM50BQ9Y247 325 aa6.97□□□□□ -1.29
LINC01880-201ENST00000446593 COG6Q9Y2V7 657 aa6.97□□□□□ -1.29
LINC01880-201ENST00000446593 NOP58Q9Y2X3 529 aaKnown RBP6.97□□□□□ -1.29
LINC01880-201ENST00000446593 TNKSO95271 1327 aa6.97□□□□□ -1.29
LINC01880-201ENST00000446593 TRANK1O15050 2925 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 MUC6Q6W4X9 2439 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.96□□□□□ -1.3
LINC01880-201ENST00000446593 DCXO43602 365 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 LPXNO60711 386 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 IQCF3P0C7M6 154 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 CYP2C9P11712 490 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 TRIM27P14373 513 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 SMPD1P17405 629 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 KCNA5P22460 613 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 CNTN2Q02246 1040 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 BFSP2Q13515 415 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 AACSQ86V21 672 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 LCORLQ8N3X6 602 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 CLUAP1Q96AJ1 413 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 VWCEQ96DN2 955 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 MFSD14AQ96MC6 490 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 NUP88Q99567 741 aaPredicted RBP6.96□□□□□ -1.3
LINC01880-201ENST00000446593 UPF3BQ9BZI7 483 aaKnown RBP6.96□□□□□ -1.3
LINC01880-201ENST00000446593 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.96□□□□□ -1.3
LINC01880-201ENST00000446593 KATNBL1Q9H079 304 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 UBE2ZQ9H832 354 aaPredicted RBP6.96□□□□□ -1.3
LINC01880-201ENST00000446593 ACAD9Q9H845 621 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 ARMT1Q9H993 441 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 SLC38A10Q9HBR0 1119 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 HOMER2Q9NSB8 354 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 TRMT13Q9NUP7 481 aaKnown RBP6.96□□□□□ -1.3
LINC01880-201ENST00000446593 CLIP2Q9UDT6 1046 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 CTNNA3Q9UI47 895 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 FEM1BQ9UK73 627 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 SIPA1L1O43166 1804 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 ZNF536O15090 1300 aa6.96□□□□□ -1.3
LINC01880-201ENST00000446593 TCRBV5S4A2TA0A5A2 114 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 GOLIM4O00461 696 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 PRKAB2O43741 272 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 NDUFB10O96000 172 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 CPT1AP50416 773 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 LRRFIP1Q32MZ4 808 aaKnown RBP6.95□□□□□ -1.3
LINC01880-201ENST00000446593 TKFCQ3LXA3 575 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 HSP90AB4PQ58FF6 505 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 FAM47CQ5HY64 1035 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 PTCRAQ6ISU1 281 aaPredicted RBP6.95□□□□□ -1.3
LINC01880-201ENST00000446593 KIAA1211Q6ZU35 1233 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 EEPD1Q7L9B9 569 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 FAM133AQ8N9E0 248 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.95□□□□□ -1.3
LINC01880-201ENST00000446593 FGD4Q96M96 766 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 TGS1Q96RS0 853 aaKnown RBP6.95□□□□□ -1.3
LINC01880-201ENST00000446593 CRBNQ96SW2 442 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 DNAJC2Q99543 621 aaKnown RBP6.95□□□□□ -1.3
LINC01880-201ENST00000446593 RAD9AQ99638 391 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 MKNK2Q9HBH9 465 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 ZNF287Q9HBT7 754 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 NOD1Q9Y239 953 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 SUPT16HQ9Y5B9 1047 aaKnown RBP6.95□□□□□ -1.3
LINC01880-201ENST00000446593 ASTN1O14525 1302 aa6.95□□□□□ -1.3
LINC01880-201ENST00000446593 CYP2D7A0A087X1C5 515 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 LOC100996750A0A140TA64 210 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 SOWAHBA6NEL2 793 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 GRXCR2A6NFK2 248 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 KPNA6O60684 536 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 MBD4O95243 580 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 PARNO95453 639 aaKnown RBP6.94□□□□□ -1.3
LINC01880-201ENST00000446593 MYL3P08590 195 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 PURAQ00577 322 aaKnown RBP6.94□□□□□ -1.3
LINC01880-201ENST00000446593 FOXK2Q01167 660 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 PTPN11Q06124 597 aaPredicted RBP6.94□□□□□ -1.3
LINC01880-201ENST00000446593 NBPF20Q3BBV1 942 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 DUSP28Q4G0W2 176 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 TAPT1Q6NXT6 567 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 NFRKBQ6P4R8 1299 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 CTR9Q6PD62 1173 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 RPAP2Q8IXW5 612 aaPredicted RBP6.94□□□□□ -1.3
LINC01880-201ENST00000446593 ZNF444Q8N0Y2 327 aaPredicted RBP6.94□□□□□ -1.3
LINC01880-201ENST00000446593 CCDC155Q8N6L0 562 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.94□□□□□ -1.3
LINC01880-201ENST00000446593 CHURC1Q8WUH1 139 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 MKL1Q969V6 931 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 TRERF1Q96PN7 1200 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 MTG1Q9BT17 334 aaPredicted RBP6.94□□□□□ -1.3
LINC01880-201ENST00000446593 KRTAP4-6Q9BYQ5 205 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 SUGCTQ9HAC7 445 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 VTA1Q9NP79 307 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 A1CFQ9NQ94 594 aaKnown RBP6.94□□□□□ -1.3
LINC01880-201ENST00000446593 PDGFCQ9NRA1 345 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 ARPP21Q9UBL0 812 aaPredicted RBP6.94□□□□□ -1.3
LINC01880-201ENST00000446593 PRKAG3Q9UGI9 489 aa6.94□□□□□ -1.3
LINC01880-201ENST00000446593 MTUS1Q9ULD2 1270 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms