RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 NACAP1Q9BZK3 213 aa17.64■□□□□ 0.41
MRPL40-202ENST00000443660 CHMP4BQ9H444 224 aaKnown RBP17.64■□□□□ 0.41
MRPL40-202ENST00000443660 CHD7Q9P2D1 2997 aa17.64■□□□□ 0.41
MRPL40-202ENST00000443660 ADD3Q9UEY8 706 aaKnown RBP17.64■□□□□ 0.41
MRPL40-202ENST00000443660 DDX49Q9Y6V7 483 aaKnown RBP17.64■□□□□ 0.41
MRPL40-202ENST00000443660 PATL2C9JE40 543 aaKnown RBP17.63■□□□□ 0.41
MRPL40-202ENST00000443660 RNF113AO15541 343 aaKnown RBP17.63■□□□□ 0.41
MRPL40-202ENST00000443660 PLA2G6O60733 806 aa17.63■□□□□ 0.41
MRPL40-202ENST00000443660 GPR37L1O60883 481 aa17.63■□□□□ 0.41
MRPL40-202ENST00000443660 ZFYP08048 801 aaPredicted RBP17.63■□□□□ 0.41
MRPL40-202ENST00000443660 PURAQ00577 322 aaKnown RBP17.63■□□□□ 0.41
MRPL40-202ENST00000443660 KRT40Q6A162 431 aa17.63■□□□□ 0.41
MRPL40-202ENST00000443660 RCSD1Q6JBY9 416 aa17.63■□□□□ 0.41
MRPL40-202ENST00000443660 KBTBD3Q8NAB2 608 aa17.63■□□□□ 0.41
MRPL40-202ENST00000443660 LRRCC1Q9C099 1032 aa17.63■□□□□ 0.41
MRPL40-202ENST00000443660 ECHDC1Q9NTX5 307 aa17.63■□□□□ 0.41
MRPL40-202ENST00000443660 DDX19BQ9UMR2 479 aa17.63■□□□□ 0.41
MRPL40-202ENST00000443660 TCF20Q9UGU0 1960 aaKnown RBP17.62■□□□□ 0.41
MRPL40-202ENST00000443660 EPOPA6NHQ4 379 aa17.62■□□□□ 0.41
MRPL40-202ENST00000443660 GPAA1O43292 621 aa17.62■□□□□ 0.41
MRPL40-202ENST00000443660 IQCF3P0C7M6 154 aa17.62■□□□□ 0.41
MRPL40-202ENST00000443660 GRB10Q13322 594 aa17.62■□□□□ 0.41
MRPL40-202ENST00000443660 BFSP2Q13515 415 aa17.62■□□□□ 0.41
MRPL40-202ENST00000443660 MUM1L1Q5H9M0 696 aa17.62■□□□□ 0.41
MRPL40-202ENST00000443660 KCTD1Q719H9 257 aa17.62■□□□□ 0.41
MRPL40-202ENST00000443660 IFNL3Q8IZI9 196 aa17.62■□□□□ 0.41
MRPL40-202ENST00000443660 MORC4Q8TE76 937 aa17.62■□□□□ 0.41
MRPL40-202ENST00000443660 ZBTB40Q9NUA8 1239 aa17.62■□□□□ 0.41
MRPL40-202ENST00000443660 CCPG1Q9ULG6 757 aa17.62■□□□□ 0.41
MRPL40-202ENST00000443660 NOD1Q9Y239 953 aa17.62■□□□□ 0.41
MRPL40-202ENST00000443660 PITPNM1O00562 1244 aa17.61■□□□□ 0.41
MRPL40-202ENST00000443660 KPNA6O60684 536 aa17.61■□□□□ 0.41
MRPL40-202ENST00000443660 KCNJ6P48051 423 aa17.61■□□□□ 0.41
MRPL40-202ENST00000443660 SNAP25P60880 206 aa17.61■□□□□ 0.41
MRPL40-202ENST00000443660 LRRFIP1Q32MZ4 808 aaKnown RBP17.61■□□□□ 0.41
MRPL40-202ENST00000443660 NBPF20Q3BBV1 942 aa17.61■□□□□ 0.41
MRPL40-202ENST00000443660 OR6J1Q8NGC5 347 aa17.61■□□□□ 0.41
MRPL40-202ENST00000443660 EPB41L4AQ9HCS5 686 aaPredicted RBP17.61■□□□□ 0.41
MRPL40-202ENST00000443660 PRR12Q9ULL5 1215 aa17.61■□□□□ 0.41
MRPL40-202ENST00000443660 STX8Q9UNK0 236 aa17.61■□□□□ 0.41
MRPL40-202ENST00000443660 RAD50Q92878 1312 aa17.61■□□□□ 0.41
MRPL40-202ENST00000443660 XIRP2A4UGR9 3374 aa17.6■□□□□ 0.41
MRPL40-202ENST00000443660 LOC102724159A0A0B4J2E5 919 aa17.6■□□□□ 0.41
MRPL40-202ENST00000443660 BAIAP3O94812 1187 aa17.6■□□□□ 0.41
MRPL40-202ENST00000443660 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.41
MRPL40-202ENST00000443660 PTPN11Q06124 597 aaPredicted RBP17.6■□□□□ 0.41
MRPL40-202ENST00000443660 BAATQ14032 418 aaPredicted RBP17.6■□□□□ 0.41
MRPL40-202ENST00000443660 PWP2Q15269 919 aaKnown RBP17.6■□□□□ 0.41
MRPL40-202ENST00000443660 NFRKBQ6P4R8 1299 aa17.6■□□□□ 0.41
MRPL40-202ENST00000443660 GPATCH3Q96I76 525 aa17.6■□□□□ 0.41
MRPL40-202ENST00000443660 PURBQ96QR8 312 aaKnown RBP17.6■□□□□ 0.41
MRPL40-202ENST00000443660 MPHOSPH6Q99547 160 aaKnown RBP17.6■□□□□ 0.41
MRPL40-202ENST00000443660 ZBED2Q9BTP6 218 aa17.6■□□□□ 0.41
MRPL40-202ENST00000443660 LMCD1Q9NZU5 365 aa17.6■□□□□ 0.41
MRPL40-202ENST00000443660 GREB1LQ9C091 1923 aaPredicted RBP17.6■□□□□ 0.41
MRPL40-202ENST00000443660 MCM3APO60318 1980 aa17.59■□□□□ 0.41
MRPL40-202ENST00000443660 PI4K2BG5E9Z4 385 aa17.59■□□□□ 0.41
MRPL40-202ENST00000443660 ICAM1P05362 532 aa17.59■□□□□ 0.41
MRPL40-202ENST00000443660 ALDH5A1P51649 535 aaPredicted RBP17.59■□□□□ 0.41
MRPL40-202ENST00000443660 GBF1Q92538 1859 aa17.58■□□□□ 0.41
MRPL40-202ENST00000443660 PLIN4Q96Q06 1357 aa17.58■□□□□ 0.4
MRPL40-202ENST00000443660 RBM47A0AV96 593 aaKnown RBP17.58■□□□□ 0.4
MRPL40-202ENST00000443660 FAM86C2PA6NEL3 165 aa17.58■□□□□ 0.4
MRPL40-202ENST00000443660 NKRFO15226 690 aaKnown RBP eCLIP17.58■□□□□ 0.4
MRPL40-202ENST00000443660 SMARCA5O60264 1052 aaPredicted RBP17.58■□□□□ 0.4
MRPL40-202ENST00000443660 CCDC155Q8N6L0 562 aa17.58■□□□□ 0.4
MRPL40-202ENST00000443660 NAPBQ9H115 298 aa17.58■□□□□ 0.4
MRPL40-202ENST00000443660 TRANK1O15050 2925 aa17.58■□□□□ 0.4
MRPL40-202ENST00000443660 PTPDC1A2A3K4 754 aa17.57■□□□□ 0.4
MRPL40-202ENST00000443660 TSPY2A6NKD2 308 aa17.57■□□□□ 0.4
MRPL40-202ENST00000443660 M0R2C6 588 aa17.57■□□□□ 0.4
MRPL40-202ENST00000443660 ARHGEF15O94989 841 aa17.57■□□□□ 0.4
MRPL40-202ENST00000443660 CHMP4BP1P59074 171 aa17.57■□□□□ 0.4
MRPL40-202ENST00000443660 PPARAQ07869 468 aa17.57■□□□□ 0.4
MRPL40-202ENST00000443660 PDE4DQ08499 809 aa17.57■□□□□ 0.4
MRPL40-202ENST00000443660 PPP2R5BQ15173 497 aa17.57■□□□□ 0.4
MRPL40-202ENST00000443660 KHSRPQ92945 711 aaKnown RBP eCLIP17.57■□□□□ 0.4
MRPL40-202ENST00000443660 MTMR7Q9Y216 660 aa17.57■□□□□ 0.4
MRPL40-202ENST00000443660 PRRC2BQ5JSZ5 2229 aaKnown RBP17.56■□□□□ 0.4
MRPL40-202ENST00000443660 A6NJR5 290 aa17.56■□□□□ 0.4
MRPL40-202ENST00000443660 B4DLN1 442 aa17.56■□□□□ 0.4
MRPL40-202ENST00000443660 LPXNO60711 386 aa17.56■□□□□ 0.4
MRPL40-202ENST00000443660 MRPL12P52815 198 aaKnown RBP17.56■□□□□ 0.4
MRPL40-202ENST00000443660 CCDC96Q2M329 555 aa17.56■□□□□ 0.4
MRPL40-202ENST00000443660 SCFD2Q8WU76 684 aa17.56■□□□□ 0.4
MRPL40-202ENST00000443660 C11orf16Q9NQ32 467 aa17.56■□□□□ 0.4
MRPL40-202ENST00000443660 REV3LO60673 3130 aa17.56■□□□□ 0.4
MRPL40-202ENST00000443660 CALML3P27482 149 aa17.55■□□□□ 0.4
MRPL40-202ENST00000443660 PTGISQ16647 500 aa17.55■□□□□ 0.4
MRPL40-202ENST00000443660 ALYREFQ86V81 257 aaKnown RBP17.55■□□□□ 0.4
MRPL40-202ENST00000443660 CAGE1Q8TC20 777 aa17.55■□□□□ 0.4
MRPL40-202ENST00000443660 PPP1R13LQ8WUF5 828 aa17.55■□□□□ 0.4
MRPL40-202ENST00000443660 DCAF4Q8WV16 495 aa17.55■□□□□ 0.4
MRPL40-202ENST00000443660 RANBP17Q9H2T7 1088 aaKnown RBP17.55■□□□□ 0.4
MRPL40-202ENST00000443660 PNMA2Q9UL42 364 aa17.55■□□□□ 0.4
MRPL40-202ENST00000443660 PRR33A8MZF0 331 aa17.54■□□□□ 0.4
MRPL40-202ENST00000443660 PARNO95453 639 aaKnown RBP17.54■□□□□ 0.4
MRPL40-202ENST00000443660 TXNP10599 105 aaKnown RBP17.54■□□□□ 0.4
MRPL40-202ENST00000443660 RNF207Q6ZRF8 634 aa17.54■□□□□ 0.4
MRPL40-202ENST00000443660 GJD3Q8N144 294 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms