RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CCND1P24385 295 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 TRAPPC10P48553 1259 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 SESN3P58005 492 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 RNF4P78317 190 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 GUCY1A3Q02108 690 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 SART3Q15020 963 aaKnown RBP6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 ELOA3BQ3SY89 546 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 KCNT2Q6UVM3 1135 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 USP53Q70EK8 1073 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 CHST15Q7LFX5 561 aaPredicted RBP6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 FAM43AQ8N2R8 423 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 KCT2Q8NC54 265 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 GALNT11Q8NCW6 608 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 ELOA3Q8NG57 546 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 NUDT8Q8WV74 236 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 CHTF18Q8WVB6 975 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 GPR101Q96P66 508 aaPredicted RBP6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 ZFYVE21Q9BQ24 234 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 MAN1C1Q9NR34 630 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 KLHL11Q9NVR0 708 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 PRR13Q9NZ81 148 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 GTF2IRD1Q9UHL9 959 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 PHTF1Q9UMS5 762 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 LZTS1Q9Y250 596 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 NPFFR2Q9Y5X5 522 aa6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 FRMPD2Q68DX3 1309 aaPredicted RBP6.66□□□□□ -1.34
TM9SF3-202ENST00000443638 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 PMM2O15305 246 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 GAS7O60861 476 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 GMPRP36959 345 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 KCNJ6P48051 423 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 USP14P54578 494 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 NLRP12P59046 1061 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 OCRLQ01968 901 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 ARHGAP29Q52LW3 1261 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 RSPO2Q6UXX9 243 aaPredicted RBP6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 ATXN2LQ8WWM7 1075 aaKnown RBP6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 HSPBAP1Q96EW2 488 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 KREMEN1Q96MU8 473 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 CELF4Q9BZC1 486 aaKnown RBP6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 SLC12A5Q9H2X9 1139 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 PICK1Q9NRD5 415 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 THG1LQ9NWX6 298 aaKnown RBP6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 LUZP4Q9P127 313 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 ZNF69Q9UC07 566 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 FBXO9Q9UK97 447 aaPredicted RBP6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 PCDHA8Q9Y5H6 950 aa6.65□□□□□ -1.34
TM9SF3-202ENST00000443638 H3BM21 787 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 ZRANB2O95218 330 aaKnown RBP eCLIP6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 CFBP00751 764 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 TYRP1P17643 537 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 VCAM1P19320 739 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 GPR85P60893 370 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 HTRA3P83110 453 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 MAPRE1Q15691 268 aaKnown RBP6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 NBPF9Q3BBW0 867 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 RGL3Q3MIN7 710 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 TMEM177Q53S58 311 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 HDGFL2Q7Z4V5 671 aaPredicted RBP6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 FIBCD1Q8N539 461 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 CHST14Q8NCH0 376 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 PCDH19Q8TAB3 1148 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.64□□□□□ -1.355e-8■□□□□ 11.1
TM9SF3-202ENST00000443638 SLC5A5Q92911 643 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 GSX1Q9H4S2 264 aaPredicted RBP6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 NOL6Q9H6R4 1146 aaKnown RBP6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 NGRNQ9NPE2 291 aaKnown RBP6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 PLCB1Q9NQ66 1216 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 ATG3Q9NT62 314 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 C14orf119Q9NWQ9 140 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 SWAP70Q9UH65 585 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 CEP131Q9UPN4 1083 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 PCDHB12Q9Y5F1 795 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 PPP2R3BQ9Y5P8 575 aa6.64□□□□□ -1.35
TM9SF3-202ENST00000443638 KRBA1A5PL33 1030 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 ARNTLO00327 626 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 WNT9AO14904 365 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 DDX3YO15523 660 aaKnown RBP6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 PIP5K1CO60331 668 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 SOD2P04179 222 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 ECI1P42126 302 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 ECE1P42892 770 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 LRRC32Q14392 662 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 RRP12Q5JTH9 1297 aaKnown RBP6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 FOXR1Q6PIV2 292 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 IFNL2Q8IZJ0 200 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 NPLOC4Q8TAT6 608 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 COPS5Q92905 334 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 ISL2Q96A47 359 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 FBXL18Q96ME1 805 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 TAAR9Q96RI9 348 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 PHF20Q9BVI0 1012 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 FOXQ1Q9C009 403 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 ATXN3LQ9H3M9 355 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 JPH1Q9HDC5 661 aaPredicted RBP6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 C1orf112Q9NSG2 853 aa6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 MAP3K20Q9NYL2 800 aaKnown RBP6.63□□□□□ -1.35
TM9SF3-202ENST00000443638 DNM3Q9UQ16 869 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms