RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 PRDX5P30044 214 aa9.08□□□□□ -0.96
SSXP3-201ENST00000442971 PLS1Q14651 629 aa9.08□□□□□ -0.96
SSXP3-201ENST00000442971 CCDC144BQ3MJ40 725 aa9.08□□□□□ -0.96
SSXP3-201ENST00000442971 IL31Q6EBC2 164 aa9.08□□□□□ -0.96
SSXP3-201ENST00000442971 WDR66Q8TBY9 1149 aa9.08□□□□□ -0.96
SSXP3-201ENST00000442971 PPP2R3CQ969Q6 453 aa9.08□□□□□ -0.96
SSXP3-201ENST00000442971 RUNDC1Q96C34 613 aa9.08□□□□□ -0.96
SSXP3-201ENST00000442971 MMP19Q99542 508 aa9.08□□□□□ -0.96
SSXP3-201ENST00000442971 NR2E1Q9Y466 385 aa9.08□□□□□ -0.96
SSXP3-201ENST00000442971 GPSM3Q9Y4H4 160 aa9.08□□□□□ -0.96
SSXP3-201ENST00000442971 MROH5Q6ZUA9 1318 aa9.08□□□□□ -0.96
SSXP3-201ENST00000442971 EFCAB14O75071 495 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 CSPG5O95196 566 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 GLP2RO95838 553 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 HOXB7P09629 217 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 VCAM1P19320 739 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 SPEM2Q0P670 501 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 ACVR2BQ13705 512 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 SHROOM1Q2M3G4 852 aaPredicted RBP9.07□□□□□ -0.96
SSXP3-201ENST00000442971 LRRFIP1Q32MZ4 808 aaKnown RBP9.07□□□□□ -0.96
SSXP3-201ENST00000442971 CC2D1BQ5T0F9 858 aaKnown RBP9.07□□□□□ -0.96
SSXP3-201ENST00000442971 C1orf210Q8IVY1 113 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 MSL3Q8N5Y2 521 aaKnown RBP9.07□□□□□ -0.96
SSXP3-201ENST00000442971 ZNF594Q96JF6 807 aaPredicted RBP9.07□□□□□ -0.96
SSXP3-201ENST00000442971 CFAP53Q96M91 514 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 OCEL1Q9H607 264 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 ERVK-5Q9HDB9 667 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 TSHZ2Q9NRE2 1034 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 HERC5Q9UII4 1024 aaKnown RBP9.07□□□□□ -0.96
SSXP3-201ENST00000442971 MAP3K2Q9Y2U5 619 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 MICAL3Q7RTP6 2002 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 TRIP12Q14669 1992 aaPredicted RBP9.07□□□□□ -0.96
SSXP3-201ENST00000442971 MYH2Q9UKX2 1941 aa9.07□□□□□ -0.96
SSXP3-201ENST00000442971 STK25O00506 426 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 PRB1P04280 392 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 ASGR2P07307 311 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 HOXD8P13378 290 aaPredicted RBP9.06□□□□□ -0.96
SSXP3-201ENST00000442971 NCLP19338 710 aaKnown RBP9.06□□□□□ -0.96
SSXP3-201ENST00000442971 TBC1D8BQ0IIM8 1120 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 BFSP2Q13515 415 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 GPNMBQ14956 572 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 TCTN1Q2MV58 587 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 CWF19L2Q2TBE0 894 aaKnown RBP9.06□□□□□ -0.96
SSXP3-201ENST00000442971 COL28A1Q2UY09 1125 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 ZNF605Q86T29 641 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 FEZ1Q99689 392 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 RPAP3Q9H6T3 665 aaPredicted RBP9.06□□□□□ -0.96
SSXP3-201ENST00000442971 RXFP3Q9NSD7 469 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 GINM1Q9NU53 330 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 HOXC10Q9NYD6 342 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 GMEB2Q9UKD1 530 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 CHMP3Q9Y3E7 222 aa9.06□□□□□ -0.96
SSXP3-201ENST00000442971 NEURL1BA8MQ27 555 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 C5orf67F2Z3F1 127 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 ZEB2O60315 1214 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 GDF9O60383 454 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 DDX58O95786 925 aaKnown RBP9.05□□□□□ -0.96
SSXP3-201ENST00000442971 RB1P06400 928 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 LDHBP07195 334 aaKnown RBP9.05□□□□□ -0.96
SSXP3-201ENST00000442971 SPINK2P20155 84 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 CTNNB1P35222 781 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 IKBKEQ14164 716 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 COG2Q14746 738 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 CCDC6Q16204 474 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 FSCN1Q16658 493 aaKnown RBP9.05□□□□□ -0.96
SSXP3-201ENST00000442971 TAF7LQ5H9L4 462 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 SIX5Q8N196 739 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 MAP4K1Q92918 833 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 C11orf84Q9BUA3 381 aaPredicted RBP9.05□□□□□ -0.96
SSXP3-201ENST00000442971 EPC1Q9H2F5 836 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 ZBTB21Q9ULJ3 1066 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 MYH13Q9UKX3 1938 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 UBR5O95071 2799 aaPredicted RBP9.05□□□□□ -0.96
SSXP3-201ENST00000442971 ASTN1O14525 1302 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 MAPK8IP3Q9UPT6 1336 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 C2CD4DB7Z1M9 353 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 GDF11O95390 407 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 NRIP1P48552 1158 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 USP14P54578 494 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 CASP7P55210 303 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 NEXNQ0ZGT2 675 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 NEUROD2Q15784 382 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 MAMDC4Q6UXC1 1216 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.05□□□□□ -0.96
SSXP3-201ENST00000442971 ADGRD2Q7Z7M1 963 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 ATRIPQ8WXE1 791 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 YME1L1Q96TA2 773 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 KCNK4Q9NYG8 393 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 FBXL21Q9UKT6 434 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 WASF3Q9UPY6 502 aa9.05□□□□□ -0.96
SSXP3-201ENST00000442971 FREM2Q5SZK8 3169 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 ASXL3Q9C0F0 2248 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 J3QKU1 62 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 TM4SF5O14894 197 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 TBC1D4O60343 1298 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 CXCL10P02778 98 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 MMP1P03956 469 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 FOXC1Q12948 553 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 ZNF528Q3MIS6 628 aa9.04□□□□□ -0.96
SSXP3-201ENST00000442971 SPECC1Q5M775 1068 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms