RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ADAT2Q7Z6V5 191 aaKnown RBP4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 PPFIBP1Q86W92 1011 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 ZDHHC15Q96MV8 337 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 PLCD4Q9BRC7 762 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 IRF2BPLQ9H1B7 796 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 PDLIM7Q9NR12 457 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 MBD1Q9UIS9 605 aaPredicted RBP4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 NUDT5Q9UKK9 219 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 INPP5FQ9Y2H2 1132 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 DHX57Q6P158 1386 aaKnown RBP4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 KIF21AQ7Z4S6 1674 aa4.86□□□□□ -1.63
HMGB3P11-201ENST00000440127 NUDT19A8MXV4 375 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 SASH1O94885 1247 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 L1CAMP32004 1257 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 SEPHS1P49903 392 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 AMPD2Q01433 879 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 CBX2Q14781 532 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 NCAPHQ15003 741 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 PPP2R5EQ16537 467 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 TNNI3KQ59H18 835 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 BICRALQ6AI39 1079 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 PAQR3Q6TCH7 311 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 METTL16Q86W50 562 aaKnown RBP4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 SP8Q8IXZ3 490 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 MZB1Q8WU39 189 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 BRF1Q92994 677 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 PTCHD1Q96NR3 888 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 JMJD8Q96S16 334 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 CAPN10Q9HC96 672 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 FAM86C1Q9NVL1 165 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 DBR1Q9UK59 544 aaKnown RBP4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 MINPP1Q9UNW1 487 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 SUGT1Q9Y2Z0 365 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 ZNF451Q9Y4E5 1061 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 FYCO1Q9BQS8 1478 aa4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 TARBP1Q13395 1621 aaKnown RBP4.85□□□□□ -1.63
HMGB3P11-201ENST00000440127 PHLDB1Q86UU1 1377 aa4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 ANKRD34BA5PLL1 514 aa4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 NASPP49321 788 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 GALK1P51570 392 aa4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 AFF3P51826 1226 aaKnown RBP4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 CASP7P55210 303 aa4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 HDLBPQ00341 1268 aaKnown RBP4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 FAM50AQ14320 339 aaKnown RBP4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 ZYXQ15942 572 aaKnown RBP4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 RUFY4Q6ZNE9 571 aa4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 RCC1LQ96I51 464 aaKnown RBP4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 KLHL25Q9H0H3 589 aa4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 ZCCHC4Q9H5U6 513 aa4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 KCNK12Q9HB15 430 aa4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 GCM1Q9NP62 436 aa4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 BACE2Q9Y5Z0 518 aa4.84□□□□□ -1.63
HMGB3P11-201ENST00000440127 CTTNBP2Q8WZ74 1663 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 PCF11O94913 1555 aaKnown RBP4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 GRIN2BQ13224 1484 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 IFT140Q96RY7 1462 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 SETD5Q9C0A6 1442 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 A0A1W2PQH9 124 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 NOP56O00567 594 aaKnown RBP4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 PI3P19957 117 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 PPP2R5DQ14738 602 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 PLEKHN1Q494U1 663 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 RPTNQ6XPR3 784 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 TTLL10Q6ZVT0 673 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 NLGN2Q8NFZ4 835 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 FCRL3Q96P31 734 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 SGPP1Q9BX95 441 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 RNF38Q9H0F5 515 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 CNTD2Q9H8S5 307 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 KLHL14Q9P2G3 628 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 FAN1Q9Y2M0 1017 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 CFAP43Q8NDM7 1665 aa4.83□□□□□ -1.64
HMGB3P11-201ENST00000440127 SAMD9Q5K651 1589 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 RAB3GAP2Q9H2M9 1393 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 IRS4O14654 1257 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 AURKAO14965 403 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 CBFA2T2O43439 604 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 EPHX1P07099 455 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 INHBBP09529 407 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 PAMP19021 973 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 ZC3H6P61129 1189 aaKnown RBP4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 CNKSR3Q6P9H4 555 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 LILRA6Q6PI73 481 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 VHLLQ6RSH7 139 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 LDHDQ86WU2 507 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 ADCY4Q8NFM4 1077 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 SREK1Q8WXA9 508 aaKnown RBP4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 PEX11GQ96HA9 241 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 APBA2Q99767 749 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 PARD6AQ9NPB6 346 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 CGGBP1Q9UFW8 167 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 WDR62O43379 1518 aa4.82□□□□□ -1.64
HMGB3P11-201ENST00000440127 SNAPC4Q5SXM2 1469 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 MTUS2Q5JR59 1369 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 LTBP3Q9NS15 1303 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 NPHP3-ACAD11A0A0J9YXS1 232 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 RBAK-RBAKDNI3L0D1 243 aa4.81□□□□□ -1.64
HMGB3P11-201ENST00000440127 STXBP3O00186 592 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms