RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 SPATC1Q76KD6 591 aa5.54□□□□□ -1.52
TRAPPC13-204ENST00000438419 KSR1Q8IVT5 923 aa5.54□□□□□ -1.52
TRAPPC13-204ENST00000438419 CCDC140Q96MF4 163 aa5.54□□□□□ -1.52
TRAPPC13-204ENST00000438419 TAF6LQ9Y6J9 622 aa5.54□□□□□ -1.52
TRAPPC13-204ENST00000438419 PPP1R11O60927 126 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 TBC1D8O95759 1140 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 THBDP07204 575 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 PNLIPP16233 465 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 SDHBP21912 280 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 HOXC12P31275 282 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 RBM10P98175 930 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 ZNF648Q5T619 568 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 MBLAC2Q68D91 279 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 CPNE8Q86YQ8 564 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 NUP43Q8NFH3 380 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 NPLOC4Q8TAT6 608 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 FRS2Q8WU20 508 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 DIRC2Q96SL1 478 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 DNAJC7Q99615 494 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 AARSD1Q9BTE6 412 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 SLC6A17Q9H1V8 727 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 NSUN3Q9H649 340 aaKnown RBP5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 CLEC1BQ9P126 229 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 PFDN2Q9UHV9 154 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 KDM2BQ8NHM5 1336 aa5.53□□□□□ -1.52
TRAPPC13-204ENST00000438419 TRAV20A0A0B4J274 112 aa5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 B8ZZF3 427 aa5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 DIAPH1O60610 1272 aaKnown RBP5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 SCG5P05408 212 aa5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 SNRPB2P08579 225 aaKnown RBP5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 PLS3P13797 630 aa5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 LONRF2Q1L5Z9 754 aa5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 ZC3H12BQ5HYM0 836 aaKnown RBP5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 DENND5AQ6IQ26 1287 aa5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 NOP9Q86U38 636 aaKnown RBP5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 IRF2BP1Q8IU81 584 aa5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 KREMEN2Q8NCW0 462 aa5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 NLGN2Q8NFZ4 835 aa5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 PIF1Q9H611 641 aa5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 ARHGEF4Q9NR80 690 aa5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 TMEFF2Q9UIK5 374 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC13-204ENST00000438419 TRBV23OR9-2A0A075B6M9 112 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 CPP00450 1065 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 FGFR1P11362 822 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 PAMP19021 973 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 L1CAMP32004 1257 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 GFRA1P56159 465 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 ERVFRD-1P60508 538 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 CYP4F8P98187 520 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 LAPTM5Q13571 262 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 PRSS53Q2L4Q9 553 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 JAMLQ86YT9 394 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 CCDC103Q8IW40 242 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 THAP3Q8WTV1 239 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 C1orf159Q96HA4 380 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 KRTAP9-3Q9BYQ3 159 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 ZNF552Q9H707 407 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 FBLN5Q9UBX5 448 aa5.51□□□□□ -1.53
TRAPPC13-204ENST00000438419 NPHP3-ACAD11A0A0J9YXS1 232 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 MYOCOSA0A1B0GUC4 107 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 C7orf72A4D263 438 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 ADCY3O60266 1144 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 PDE6BP35913 854 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 ECI1P42126 302 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 KCNJ6P48051 423 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 INF2Q27J81 1249 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 C2orf27AQ580R0 203 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 ADGRF1Q5T601 910 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 LILRA6Q6PI73 481 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 JMYQ8N9B5 988 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 ZBTB38Q8NAP3 1195 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 TMEM145Q8NBT3 493 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 KCTD13Q8WZ19 329 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 SLC26A8Q96RN1 970 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 MMP19Q99542 508 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 IER2Q9BTL4 223 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 EPB41L4BQ9H329 900 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 TNFRSF12AQ9NP84 129 aa5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 DCP1AQ9NPI6 582 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC13-204ENST00000438419 FARP2O94887 1054 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 CORO7P57737 925 aa5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 YBX1P67809 324 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 MAP4K2Q12851 820 aa5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 PKN1Q16512 942 aa5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 SLC35F1Q5T1Q4 408 aa5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 ZNF605Q86T29 641 aa5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 DPF3Q92784 378 aa5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 IPO9Q96P70 1041 aaKnown RBP5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 CDC6Q99741 560 aa5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 MTA3Q9BTC8 594 aa5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 PDLIM7Q9NR12 457 aa5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 KLHL14Q9P2G3 628 aa5.49□□□□□ -1.53
TRAPPC13-204ENST00000438419 OR14I1A6ND48 311 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 PRODHO43272 600 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 DLX3O60479 287 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 KRT1P04264 644 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 FAM153BP0C7A2 387 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 PABPC1P11940 636 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 TACR1P25103 407 aa5.48□□□□□ -1.53
TRAPPC13-204ENST00000438419 TESK1Q15569 626 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms