RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 RETREG1Q9H6L5 497 aa6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 CBX8Q9HC52 389 aa6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 SMYD2Q9NRG4 433 aa6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 NDFIP2Q9NV92 336 aa6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 LRP2BPQ9P2M1 347 aa6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 REV1Q9UBZ9 1251 aa6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 GPC6Q9Y625 555 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 PRR36Q9H6K5 1346 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 A0A1B0GVC2 190 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 LRRC10BA6NIK2 292 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 SLC22A31A6NKX4 558 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 NFKBIEO00221 500 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 CTNND1O60716 968 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 CD4P01730 458 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 IFIT1P09914 478 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 NCAM1P13591 858 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 RAG1P15918 1043 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 POLR2BP30876 1174 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 GRK6P43250 576 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 G3BP1Q13283 466 aaKnown RBP eCLIP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 CDC37Q16543 378 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 NBPF8Q3BBV2 869 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 FAM133BQ5BKY9 247 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 AGAP9Q5VTM2 703 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 INTS3Q68E01 1043 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 ABHD17CQ6PCB6 329 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 PGM2L1Q6PCE3 622 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 ADAMTSL4Q6UY14 1074 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 SYDE1Q6ZW31 735 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 FAM26EQ8N5C1 309 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 ZBTB34Q8NCN2 500 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 NAXEQ8NCW5 288 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 SMC1BQ8NDV3 1235 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 PPP1R14AQ96A00 147 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 ACDQ96AP0 544 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 AHCYL2Q96HN2 611 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 NUP88Q99567 741 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 APOL5Q9BWW9 433 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 WDR12Q9GZL7 423 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 C14orf119Q9NWQ9 140 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 CWC25Q9NXE8 425 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 GMIPQ9P107 970 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 GDF2Q9UK05 429 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 PCDHGC4Q9Y5F7 938 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 LRRFIP2Q9Y608 721 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 FAM155AB1AL88 458 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 EYA2O00167 538 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 BNIP3LO60238 219 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 SOD2P04179 222 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 EPHX1P07099 455 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 GLULP15104 373 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 FGFR3P22607 806 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 STT3AP46977 705 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 FAM193AP78312 1265 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 GABREP78334 506 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 MPP1Q00013 466 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 DSG1Q02413 1049 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 CCDC92Q53HC0 331 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 RRP12Q5JTH9 1297 aaKnown RBP6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 GPATCH4Q5T3I0 446 aaKnown RBP6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 SAMD5Q5TGI4 173 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 TDRD10Q5VZ19 366 aaKnown RBP6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 SLC6A19Q695T7 634 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 ZCCHC8Q6NZY4 707 aaKnown RBP6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 SLFN12Q8IYM2 578 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 CLRN3Q8NCR9 226 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 LRRN4CLQ8ND94 238 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 NXPE3Q969Y0 559 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 WNK4Q96J92 1243 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 TMEM87BQ96K49 555 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 KIAA1586Q9HCI6 787 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 EMC7Q9NPA0 242 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 SH3GLB2Q9NR46 395 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 DISC1Q9NRI5 854 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 CDC23Q9UJX2 597 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 TPCN1Q9ULQ1 816 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 TMX2Q9Y320 296 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 SAMM50Q9Y512 469 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 WASHC2AQ641Q2 1341 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 A0A1W2PNR3 127 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 NCAM2O15394 837 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 DDX3YO15523 660 aaKnown RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 OIP5O43482 229 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 XPOTO43592 962 aaKnown RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 EFCAB14O75071 495 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 H2AFYO75367 372 aaKnown RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 GLRX3O76003 335 aaKnown RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 ZBED1O96006 694 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 FLT3P36888 993 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 GSK3AP49840 483 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 APBA1Q02410 837 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 PPP2R3AQ06190 1150 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 LAMC2Q13753 1193 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 LRRC14Q15048 493 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 NTRK3Q16288 839 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 PDCD2Q16342 344 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 ARSJQ5FYB0 599 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 UBE2R2Q712K3 238 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 CMIPQ8IY22 773 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 GOLGA6L1Q8N7Z2 621 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms