RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 RETREG1Q9H6L5 497 aa6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 CBX8Q9HC52 389 aa6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 SMYD2Q9NRG4 433 aa6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 NDFIP2Q9NV92 336 aa6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 LRP2BPQ9P2M1 347 aa6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 REV1Q9UBZ9 1251 aa6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 GPC6Q9Y625 555 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P10-201ENST00000434734 PRR36Q9H6K5 1346 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 A0A1B0GVC2 190 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 LRRC10BA6NIK2 292 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 SLC22A31A6NKX4 558 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 NFKBIEO00221 500 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 CTNND1O60716 968 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 CD4P01730 458 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 IFIT1P09914 478 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 NCAM1P13591 858 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 RAG1P15918 1043 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 POLR2BP30876 1174 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 GRK6P43250 576 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 G3BP1Q13283 466 aaKnown RBP eCLIP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 CDC37Q16543 378 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 NBPF8Q3BBV2 869 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 FAM133BQ5BKY9 247 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 AGAP9Q5VTM2 703 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 INTS3Q68E01 1043 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 ABHD17CQ6PCB6 329 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 PGM2L1Q6PCE3 622 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 ADAMTSL4Q6UY14 1074 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 SYDE1Q6ZW31 735 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 FAM26EQ8N5C1 309 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 ZBTB34Q8NCN2 500 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 NAXEQ8NCW5 288 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 SMC1BQ8NDV3 1235 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 PPP1R14AQ96A00 147 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 ACDQ96AP0 544 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 AHCYL2Q96HN2 611 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 NUP88Q99567 741 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 APOL5Q9BWW9 433 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 WDR12Q9GZL7 423 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 C14orf119Q9NWQ9 140 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 CWC25Q9NXE8 425 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 GMIPQ9P107 970 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 GDF2Q9UK05 429 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 PCDHGC4Q9Y5F7 938 aa6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 LRRFIP2Q9Y608 721 aaKnown RBP6.35□□□□□ -1.39
HMGB3P10-201ENST00000434734 FAM155AB1AL88 458 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 EYA2O00167 538 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 BNIP3LO60238 219 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 SOD2P04179 222 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 EPHX1P07099 455 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 GLULP15104 373 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 FGFR3P22607 806 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 STT3AP46977 705 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 FAM193AP78312 1265 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 GABREP78334 506 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 MPP1Q00013 466 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 DSG1Q02413 1049 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 CCDC92Q53HC0 331 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 RRP12Q5JTH9 1297 aaKnown RBP6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 GPATCH4Q5T3I0 446 aaKnown RBP6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 SAMD5Q5TGI4 173 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 TDRD10Q5VZ19 366 aaKnown RBP6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 SLC6A19Q695T7 634 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 ZCCHC8Q6NZY4 707 aaKnown RBP6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 SLFN12Q8IYM2 578 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 CLRN3Q8NCR9 226 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 LRRN4CLQ8ND94 238 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 NXPE3Q969Y0 559 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 WNK4Q96J92 1243 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 TMEM87BQ96K49 555 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 KIAA1586Q9HCI6 787 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 EMC7Q9NPA0 242 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 SH3GLB2Q9NR46 395 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 DISC1Q9NRI5 854 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 CDC23Q9UJX2 597 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 TPCN1Q9ULQ1 816 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 TMX2Q9Y320 296 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 SAMM50Q9Y512 469 aa6.34□□□□□ -1.39
HMGB3P10-201ENST00000434734 WASHC2AQ641Q2 1341 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 A0A1W2PNR3 127 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 NCAM2O15394 837 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 DDX3YO15523 660 aaKnown RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 OIP5O43482 229 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 XPOTO43592 962 aaKnown RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 EFCAB14O75071 495 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 H2AFYO75367 372 aaKnown RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 GLRX3O76003 335 aaKnown RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 ZBED1O96006 694 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 FLT3P36888 993 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 GSK3AP49840 483 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 APBA1Q02410 837 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 PPP2R3AQ06190 1150 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 LAMC2Q13753 1193 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 LRRC14Q15048 493 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 NTRK3Q16288 839 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 PDCD2Q16342 344 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 ARSJQ5FYB0 599 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 UBE2R2Q712K3 238 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 CMIPQ8IY22 773 aa6.33□□□□□ -1.4
HMGB3P10-201ENST00000434734 GOLGA6L1Q8N7Z2 621 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms