RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 AP5M1Q9H0R1 490 aa20.48■□□□□ 0.87
NUP50-208ENST00000430547 JMJD4Q9H9V9 463 aa20.48■□□□□ 0.87
NUP50-208ENST00000430547 TAF6LQ9Y6J9 622 aa20.48■□□□□ 0.87
NUP50-208ENST00000430547 NEFLP07196 543 aa20.47■□□□□ 0.87
NUP50-208ENST00000430547 ASGR1P07306 291 aa20.47■□□□□ 0.87
NUP50-208ENST00000430547 CATIPQ7Z7H3 387 aa20.47■□□□□ 0.87
NUP50-208ENST00000430547 MCF2L2Q86YR7 1114 aa20.47■□□□□ 0.87
NUP50-208ENST00000430547 TDHQ8IZJ6 230 aa20.47■□□□□ 0.87
NUP50-208ENST00000430547 STAG2Q8N3U4 1231 aa20.47■□□□□ 0.87
NUP50-208ENST00000430547 RGS22Q8NE09 1264 aa20.47■□□□□ 0.87
NUP50-208ENST00000430547 MORC4Q8TE76 937 aa20.47■□□□□ 0.87
NUP50-208ENST00000430547 AMNQ9BXJ7 453 aa20.47■□□□□ 0.87
NUP50-208ENST00000430547 MAF1Q9H063 256 aa20.47■□□□□ 0.87
NUP50-208ENST00000430547 LSG1Q9H089 658 aaKnown RBP20.47■□□□□ 0.87
NUP50-208ENST00000430547 MAD2L2Q9UI95 211 aa20.47■□□□□ 0.87
NUP50-208ENST00000430547 MRPL11Q9Y3B7 192 aaKnown RBP20.47■□□□□ 0.87
NUP50-208ENST00000430547 PQBP1O60828 265 aaKnown RBP20.46■□□□□ 0.87
NUP50-208ENST00000430547 TLE2Q04725 743 aa20.46■□□□□ 0.87
NUP50-208ENST00000430547 GRM4Q14833 912 aa20.46■□□□□ 0.87
NUP50-208ENST00000430547 CCSAPQ6IQ19 270 aaPredicted RBP20.46■□□□□ 0.87
NUP50-208ENST00000430547 TAPT1Q6NXT6 567 aa20.46■□□□□ 0.87
NUP50-208ENST00000430547 PDLIM7Q9NR12 457 aa20.46■□□□□ 0.87
NUP50-208ENST00000430547 PDGFCQ9NRA1 345 aa20.46■□□□□ 0.87
NUP50-208ENST00000430547 PCDH10Q9P2E7 1040 aa20.46■□□□□ 0.87
NUP50-208ENST00000430547 BAZ2BQ9UIF8 2168 aaKnown RBP20.46■□□□□ 0.87
NUP50-208ENST00000430547 DCDC2CA8MYV0 355 aa20.45■□□□□ 0.86
NUP50-208ENST00000430547 ZEB2O60315 1214 aa20.45■□□□□ 0.86
NUP50-208ENST00000430547 CLTBP09497 229 aa20.45■□□□□ 0.86
NUP50-208ENST00000430547 SMPD1P17405 629 aa20.45■□□□□ 0.86
NUP50-208ENST00000430547 IRX5P78411 483 aaPredicted RBP20.45■□□□□ 0.86
NUP50-208ENST00000430547 BEX3Q00994 111 aa20.45■□□□□ 0.86
NUP50-208ENST00000430547 MB21D2Q8IYB1 491 aaPredicted RBP20.45■□□□□ 0.86
NUP50-208ENST00000430547 GNEQ9Y223 722 aaKnown RBP20.45■□□□□ 0.86
NUP50-208ENST00000430547 ELP1O95163 1332 aa20.45■□□□□ 0.86
NUP50-208ENST00000430547 MROH7Q68CQ1 1323 aa20.45■□□□□ 0.86
NUP50-208ENST00000430547 KIAA1217Q5T5P2 1943 aa20.45■□□□□ 0.86
NUP50-208ENST00000430547 PALM3A6NDB9 673 aaPredicted RBP20.44■□□□□ 0.86
NUP50-208ENST00000430547 SLC27A2O14975 620 aa20.44■□□□□ 0.86
NUP50-208ENST00000430547 ZBTB5O15062 677 aa20.44■□□□□ 0.86
NUP50-208ENST00000430547 DYNC1LI2O43237 492 aaPredicted RBP20.44■□□□□ 0.86
NUP50-208ENST00000430547 MCM5P33992 734 aa20.44■□□□□ 0.86
NUP50-208ENST00000430547 ANTXR2P58335 489 aa20.44■□□□□ 0.86
NUP50-208ENST00000430547 TRAF1Q13077 416 aa20.44■□□□□ 0.86
NUP50-208ENST00000430547 FSCN1Q16658 493 aaKnown RBP20.44■□□□□ 0.86
NUP50-208ENST00000430547 RNF20Q5VTR2 975 aa20.44■□□□□ 0.86
NUP50-208ENST00000430547 HOMER1Q86YM7 354 aa20.44■□□□□ 0.86
NUP50-208ENST00000430547 WDR11Q9BZH6 1224 aa20.44■□□□□ 0.86
NUP50-208ENST00000430547 Q9Y3F1 56 aa20.44■□□□□ 0.86
NUP50-208ENST00000430547 A0A0U1RQG5 324 aaPredicted RBP20.43■□□□□ 0.86
NUP50-208ENST00000430547 PRC1O43663 620 aa20.43■□□□□ 0.86
NUP50-208ENST00000430547 CDC45O75419 566 aa20.43■□□□□ 0.86
NUP50-208ENST00000430547 NKX3-2P78367 333 aa20.43■□□□□ 0.86
NUP50-208ENST00000430547 DUSP28Q4G0W2 176 aa20.43■□□□□ 0.86
NUP50-208ENST00000430547 CREB3L3Q68CJ9 461 aa20.43■□□□□ 0.86
NUP50-208ENST00000430547 NFXL1Q6ZNB6 911 aa20.43■□□□□ 0.86
NUP50-208ENST00000430547 CTCFLQ8NI51 663 aaPredicted RBP20.43■□□□□ 0.86
NUP50-208ENST00000430547 MTA3Q9BTC8 594 aa20.43■□□□□ 0.86
NUP50-208ENST00000430547 SENP2Q9HC62 589 aa20.43■□□□□ 0.86
NUP50-208ENST00000430547 CABYRO75952 493 aa20.42■□□□□ 0.86
NUP50-208ENST00000430547 CFBP00751 764 aa20.42■□□□□ 0.86
NUP50-208ENST00000430547 TROAPQ12815 778 aa20.42■□□□□ 0.86
NUP50-208ENST00000430547 PPP2R5BQ15173 497 aa20.42■□□□□ 0.86
NUP50-208ENST00000430547 ANKRD33Q7Z3H0 272 aa20.42■□□□□ 0.86
NUP50-208ENST00000430547 IGDCC4Q8TDY8 1250 aa20.42■□□□□ 0.86
NUP50-208ENST00000430547 NSUN6Q8TEA1 469 aaKnown RBP20.42■□□□□ 0.86
NUP50-208ENST00000430547 TOX2Q96NM4 488 aa20.42■□□□□ 0.86
NUP50-208ENST00000430547 TMEM39AQ9NV64 488 aa20.42■□□□□ 0.86
NUP50-208ENST00000430547 PCDHA1Q9Y5I3 950 aa20.42■□□□□ 0.86
NUP50-208ENST00000430547 CCDC69A6NI79 296 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 CTAGE5O15320 804 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 DDAH1O94760 285 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 RAG1P15918 1043 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 EDNRBP24530 442 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 KIF5BP33176 963 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 NECTIN1Q15223 517 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 SH3RF1Q7Z6J0 888 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 ZNF654Q8IZM8 581 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 TMTC2Q8N394 836 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 SYTL5Q8TDW5 730 aaPredicted RBP20.41■□□□□ 0.86
NUP50-208ENST00000430547 SCFD2Q8WU76 684 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 TBC1D5Q92609 795 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 BADQ92934 168 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 MTMR8Q96EF0 704 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 TMEM87BQ96K49 555 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 LY9Q9HBG7 655 aa20.41■□□□□ 0.86
NUP50-208ENST00000430547 RBM47A0AV96 593 aaKnown RBP20.4■□□□□ 0.86
NUP50-208ENST00000430547 TRIM43BA6NCK2 446 aa20.4■□□□□ 0.86
NUP50-208ENST00000430547 NKRFO15226 690 aaKnown RBP eCLIP20.4■□□□□ 0.86
NUP50-208ENST00000430547 TLR3O15455 904 aaKnown RBP20.4■□□□□ 0.86
NUP50-208ENST00000430547 BRDTQ58F21 947 aaPredicted RBP20.4■□□□□ 0.86
NUP50-208ENST00000430547 ARHGEF16Q5VV41 709 aa20.4■□□□□ 0.86
NUP50-208ENST00000430547 CXCL17Q6UXB2 119 aa20.4■□□□□ 0.86
NUP50-208ENST00000430547 OR6J1Q8NGC5 347 aa20.4■□□□□ 0.86
NUP50-208ENST00000430547 TRIM43Q96BQ3 446 aaPredicted RBP20.4■□□□□ 0.86
NUP50-208ENST00000430547 TAAR1Q96RJ0 339 aa20.4■□□□□ 0.86
NUP50-208ENST00000430547 PIGSQ96S52 555 aa20.4■□□□□ 0.86
NUP50-208ENST00000430547 RMDN3Q96TC7 470 aa20.4■□□□□ 0.86
NUP50-208ENST00000430547 RIOX1Q9H6W3 641 aa20.4■□□□□ 0.86
NUP50-208ENST00000430547 ARVCFO00192 962 aa20.39■□□□□ 0.85
NUP50-208ENST00000430547 PTGS1P23219 599 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms