RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 ZNF274Q96GC6 653 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-204ENST00000427724 MRFAP1L1Q96HT8 127 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.82□□□□□ -0.52
TCOF1-204ENST00000427724 KCNH3Q9ULD8 1083 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 TAF6LQ9Y6J9 622 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 CEMIPQ8WUJ3 1361 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 GOLGA6L9A6NEM1 432 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 PFKFB1P16118 471 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 FCGRTP55899 365 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 NFIAQ12857 509 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 PTPN21Q16825 1174 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 TTC31Q49AM3 519 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-204ENST00000427724 USP50Q70EL3 339 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-204ENST00000427724 FBXO33Q7Z6M2 555 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 STK25O00506 426 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 DYNC1LI2O43237 492 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-204ENST00000427724 KIF4AO95239 1232 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 NLRP12P59046 1061 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 TRPC3Q13507 836 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 TERF2Q15554 542 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 PDXDC2PQ6P474 469 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 GPRC5AQ8NFJ5 357 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 CDHR1Q96JP9 859 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 SEPT9Q9UHD8 586 aaPredicted RBP11.82□□□□□ -0.52
TCOF1-204ENST00000427724 NUB1Q9Y5A7 615 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 USP32Q8NFA0 1604 aa11.82□□□□□ -0.52
TCOF1-204ENST00000427724 C19orf81C9J6K1 198 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 NMT2O60551 498 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 EVCP57679 992 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 PNOCQ13519 176 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 DPCR1Q3MIW9 517 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 RPS6KC1Q96S38 1066 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 ZNF577Q9BSK1 485 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.81□□□□□ -0.52
TCOF1-204ENST00000427724 KDM6AO15550 1401 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-204ENST00000427724 SPDYE2BA6NHP3 402 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 WNT10BO00744 389 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 PSMA7O14818 248 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 SPDYE6P0CI01 402 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 CCND2P30279 289 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 STXBP2Q15833 593 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 LRCH2Q5VUJ6 765 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 CCDC117Q8IWD4 279 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-204ENST00000427724 STAMQ92783 540 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 TMEM47Q9BQJ4 181 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 CRACR2AQ9BSW2 395 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 CARD6Q9BX69 1037 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 ABCC12Q96J65 1359 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 POLR2DO15514 142 aaKnown RBP11.81□□□□□ -0.52
TCOF1-204ENST00000427724 YEATS4O95619 227 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 ATN1P54259 1190 aaPredicted RBP11.81□□□□□ -0.52
TCOF1-204ENST00000427724 GIMAP7Q8NHV1 300 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 SLC7A3Q8WY07 619 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 OPTNQ96CV9 577 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 ACAD9Q9H845 621 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 GJB4Q9NTQ9 266 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 GPRC5DQ9NZD1 345 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 FEM1BQ9UK73 627 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 RCOR1Q9UKL0 485 aa11.81□□□□□ -0.52
TCOF1-204ENST00000427724 DDAH1O94760 285 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 ALDH1A1P00352 501 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 ABL1P00519 1130 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 ZSCAN26Q16670 478 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 RABL6Q3YEC7 729 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-204ENST00000427724 LDHDQ86WU2 507 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 TRMT44Q8IYL2 757 aaKnown RBP11.8□□□□□ -0.52
TCOF1-204ENST00000427724 MICALL1Q8N3F8 863 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 BAG1Q99933 345 aaPredicted RBP11.8□□□□□ -0.52
TCOF1-204ENST00000427724 UBE2SQ16763 222 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 FAM117BQ6P1L5 589 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 ILDR2Q71H61 639 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 ZBTB33Q86T24 672 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 CDCA5Q96FF9 252 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 MTIF3Q9H2K0 278 aaKnown RBP11.8□□□□□ -0.52
TCOF1-204ENST00000427724 RMND1Q9NWS8 449 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 MAPK8IP1Q9UQF2 711 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 SALL3Q9BXA9 1300 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 ANKRD62A6NC57 917 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 CETN2P41208 172 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 TBC1D8BQ0IIM8 1120 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 SMC1AQ14683 1233 aaKnown RBP11.8□□□□□ -0.52
TCOF1-204ENST00000427724 SLC9C1Q4G0N8 1177 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 RDH13Q8NBN7 331 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 FBXO18Q8NFZ0 1043 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 TRAF5O00463 557 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 OAS2P29728 719 aaKnown RBP11.8□□□□□ -0.52
TCOF1-204ENST00000427724 TECP42680 631 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 CDR1P51861 262 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 RCSD1Q6JBY9 416 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 NEK8Q86SG6 692 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 DPF2Q92785 391 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 PDE4DIPQ5VU43 2346 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 MED23Q9ULK4 1368 aa11.8□□□□□ -0.52
TCOF1-204ENST00000427724 TM4SF1P30408 202 aa11.79□□□□□ -0.52
TCOF1-204ENST00000427724 PLCD1P51178 756 aa11.79□□□□□ -0.52
TCOF1-204ENST00000427724 IRX5P78411 483 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-204ENST00000427724 NOGQ13253 232 aa11.79□□□□□ -0.52
TCOF1-204ENST00000427724 C7orf31Q8N865 590 aa11.79□□□□□ -0.52
TCOF1-204ENST00000427724 ATP6V0A1Q93050 837 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms