RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 CLTBP09497 229 aa18.77■□□□□ 0.6
SNHG17-205ENST00000424235 RPS6P62753 249 aaKnown RBP18.77■□□□□ 0.6
SNHG17-205ENST00000424235 IRX5P78411 483 aaPredicted RBP18.77■□□□□ 0.6
SNHG17-205ENST00000424235 NFXL1Q6ZNB6 911 aa18.77■□□□□ 0.6
SNHG17-205ENST00000424235 HOMER1Q86YM7 354 aa18.77■□□□□ 0.6
SNHG17-205ENST00000424235 CCDC136Q96JN2 1154 aa18.77■□□□□ 0.6
SNHG17-205ENST00000424235 PDGFCQ9NRA1 345 aa18.77■□□□□ 0.6
SNHG17-205ENST00000424235 TMEM39AQ9NV64 488 aa18.77■□□□□ 0.6
SNHG17-205ENST00000424235 EYSQ5T1H1 3165 aa18.77■□□□□ 0.59
SNHG17-205ENST00000424235 SMCHD1A6NHR9 2005 aa18.76■□□□□ 0.59
SNHG17-205ENST00000424235 MCM3APO60318 1980 aa18.76■□□□□ 0.59
SNHG17-205ENST00000424235 KLRF2D3W0D1 207 aa18.76■□□□□ 0.59
SNHG17-205ENST00000424235 RAG1P15918 1043 aa18.76■□□□□ 0.59
SNHG17-205ENST00000424235 GJA9P57773 515 aa18.76■□□□□ 0.59
SNHG17-205ENST00000424235 FSCN1Q16658 493 aaKnown RBP18.76■□□□□ 0.59
SNHG17-205ENST00000424235 QRICH1Q2TAL8 776 aa18.76■□□□□ 0.59
SNHG17-205ENST00000424235 CATIPQ7Z7H3 387 aa18.76■□□□□ 0.59
SNHG17-205ENST00000424235 SKAP1Q86WV1 359 aa18.76■□□□□ 0.59
SNHG17-205ENST00000424235 MCF2L2Q86YR7 1114 aa18.76■□□□□ 0.59
SNHG17-205ENST00000424235 CLEC4DQ8WXI8 215 aa18.76■□□□□ 0.59
SNHG17-205ENST00000424235 PDLIM7Q9NR12 457 aa18.76■□□□□ 0.59
SNHG17-205ENST00000424235 MRPL11Q9Y3B7 192 aaKnown RBP18.76■□□□□ 0.59
SNHG17-205ENST00000424235 ASTN1O14525 1302 aa18.75■□□□□ 0.59
SNHG17-205ENST00000424235 A0A0U1RQG5 324 aaPredicted RBP18.75■□□□□ 0.59
SNHG17-205ENST00000424235 SMPD1P17405 629 aa18.75■□□□□ 0.59
SNHG17-205ENST00000424235 SNX17Q15036 470 aa18.75■□□□□ 0.59
SNHG17-205ENST00000424235 IQSEC1Q6DN90 963 aa18.75■□□□□ 0.59
SNHG17-205ENST00000424235 STAG2Q8N3U4 1231 aa18.75■□□□□ 0.59
SNHG17-205ENST00000424235 KLHDC9Q8NEP7 349 aa18.75■□□□□ 0.59
SNHG17-205ENST00000424235 BADQ92934 168 aa18.75■□□□□ 0.59
SNHG17-205ENST00000424235 KATNBL1Q9H079 304 aa18.75■□□□□ 0.59
SNHG17-205ENST00000424235 UPF3AQ9H1J1 476 aaKnown RBP18.75■□□□□ 0.59
SNHG17-205ENST00000424235 MROH7Q68CQ1 1323 aa18.74■□□□□ 0.59
SNHG17-205ENST00000424235 TLR3O15455 904 aaKnown RBP18.74■□□□□ 0.59
SNHG17-205ENST00000424235 CFBP00751 764 aa18.74■□□□□ 0.59
SNHG17-205ENST00000424235 CST5P28325 142 aaPredicted RBP18.74■□□□□ 0.59
SNHG17-205ENST00000424235 PPP2R5BQ15173 497 aa18.74■□□□□ 0.59
SNHG17-205ENST00000424235 SEC23AQ15436 765 aa18.74■□□□□ 0.59
SNHG17-205ENST00000424235 CXCL17Q6UXB2 119 aa18.74■□□□□ 0.59
SNHG17-205ENST00000424235 SH3RF1Q7Z6J0 888 aa18.74■□□□□ 0.59
SNHG17-205ENST00000424235 PIBF1Q8WXW3 757 aa18.74■□□□□ 0.59
SNHG17-205ENST00000424235 MAP4K1Q92918 833 aa18.74■□□□□ 0.59
SNHG17-205ENST00000424235 ESYT1Q9BSJ8 1104 aa18.74■□□□□ 0.59
SNHG17-205ENST00000424235 AMNQ9BXJ7 453 aa18.74■□□□□ 0.59
SNHG17-205ENST00000424235 WDR11Q9BZH6 1224 aa18.74■□□□□ 0.59
SNHG17-205ENST00000424235 JMJD4Q9H9V9 463 aa18.74■□□□□ 0.59
SNHG17-205ENST00000424235 PTGS1P23219 599 aa18.73■□□□□ 0.59
SNHG17-205ENST00000424235 BRDTQ58F21 947 aaPredicted RBP18.73■□□□□ 0.59
SNHG17-205ENST00000424235 C1orf53Q5VUE5 145 aa18.73■□□□□ 0.59
SNHG17-205ENST00000424235 DNERQ8NFT8 737 aa18.73■□□□□ 0.59
SNHG17-205ENST00000424235 OR6J1Q8NGC5 347 aa18.73■□□□□ 0.59
SNHG17-205ENST00000424235 GPHNQ9NQX3 736 aaPredicted RBP18.73■□□□□ 0.59
SNHG17-205ENST00000424235 TAF6LQ9Y6J9 622 aa18.73■□□□□ 0.59
SNHG17-205ENST00000424235 ELP1O95163 1332 aa18.73■□□□□ 0.59
SNHG17-205ENST00000424235 VCANP13611 3396 aa18.72■□□□□ 0.59
SNHG17-205ENST00000424235 TRIM43BA6NCK2 446 aa18.72■□□□□ 0.59
SNHG17-205ENST00000424235 CCDC69A6NI79 296 aa18.72■□□□□ 0.59
SNHG17-205ENST00000424235 PRC1O43663 620 aa18.72■□□□□ 0.59
SNHG17-205ENST00000424235 MYL3P08590 195 aa18.72■□□□□ 0.59
SNHG17-205ENST00000424235 CHMP4BP1P59074 171 aa18.72■□□□□ 0.59
SNHG17-205ENST00000424235 BMP2KLQ5H9B9 411 aa18.72■□□□□ 0.59
SNHG17-205ENST00000424235 ARHGEF16Q5VV41 709 aa18.72■□□□□ 0.59
SNHG17-205ENST00000424235 TAPT1Q6NXT6 567 aa18.72■□□□□ 0.59
SNHG17-205ENST00000424235 STOX1Q6ZVD7 989 aa18.72■□□□□ 0.59
SNHG17-205ENST00000424235 CTCFLQ8NI51 663 aaPredicted RBP18.72■□□□□ 0.59
SNHG17-205ENST00000424235 TRIM43Q96BQ3 446 aaPredicted RBP18.72■□□□□ 0.59
SNHG17-205ENST00000424235 MAD2L2Q9UI95 211 aa18.72■□□□□ 0.59
SNHG17-205ENST00000424235 LOC102724159A0A0B4J2E5 919 aa18.71■□□□□ 0.59
SNHG17-205ENST00000424235 ZBTB5O15062 677 aa18.71■□□□□ 0.59
SNHG17-205ENST00000424235 CABYRO75952 493 aa18.71■□□□□ 0.59
SNHG17-205ENST00000424235 TRAF1Q13077 416 aa18.71■□□□□ 0.59
SNHG17-205ENST00000424235 GRM4Q14833 912 aa18.71■□□□□ 0.59
SNHG17-205ENST00000424235 PWP2Q15269 919 aaKnown RBP18.71■□□□□ 0.59
SNHG17-205ENST00000424235 RNF20Q5VTR2 975 aa18.71■□□□□ 0.59
SNHG17-205ENST00000424235 SEPT14Q6ZU15 432 aa18.71■□□□□ 0.59
SNHG17-205ENST00000424235 NSUN6Q8TEA1 469 aaKnown RBP18.71■□□□□ 0.59
SNHG17-205ENST00000424235 SCFD2Q8WU76 684 aa18.71■□□□□ 0.59
SNHG17-205ENST00000424235 RMDN3Q96TC7 470 aa18.71■□□□□ 0.59
SNHG17-205ENST00000424235 COL25A1Q9BXS0 654 aaPredicted RBP18.71■□□□□ 0.59
SNHG17-205ENST00000424235 GNEQ9Y223 722 aaKnown RBP18.71■□□□□ 0.59
SNHG17-205ENST00000424235 PCDHA1Q9Y5I3 950 aa18.71■□□□□ 0.59
SNHG17-205ENST00000424235 LRRC37A2A6NM11 1700 aa18.7■□□□□ 0.58
SNHG17-205ENST00000424235 ARVCFO00192 962 aa18.7■□□□□ 0.58
SNHG17-205ENST00000424235 SLC27A2O14975 620 aa18.7■□□□□ 0.58
SNHG17-205ENST00000424235 EIF2AK2P19525 551 aaKnown RBP18.7■□□□□ 0.58
SNHG17-205ENST00000424235 MCM5P33992 734 aa18.7■□□□□ 0.58
SNHG17-205ENST00000424235 CPT1AP50416 773 aa18.7■□□□□ 0.58
SNHG17-205ENST00000424235 DUSP28Q4G0W2 176 aa18.7■□□□□ 0.58
SNHG17-205ENST00000424235 CCSAPQ6IQ19 270 aaPredicted RBP18.7■□□□□ 0.58
SNHG17-205ENST00000424235 PIGSQ96S52 555 aa18.7■□□□□ 0.58
SNHG17-205ENST00000424235 MYL10Q9BUA6 226 aa18.7■□□□□ 0.58
SNHG17-205ENST00000424235 PPP1R12CQ9BZL4 782 aa18.7■□□□□ 0.58
SNHG17-205ENST00000424235 LSG1Q9H089 658 aaKnown RBP18.7■□□□□ 0.58
SNHG17-205ENST00000424235 SENP2Q9HC62 589 aa18.7■□□□□ 0.58
SNHG17-205ENST00000424235 CDC45O75419 566 aa18.69■□□□□ 0.58
SNHG17-205ENST00000424235 TXNP10599 105 aaKnown RBP18.69■□□□□ 0.58
SNHG17-205ENST00000424235 KIF5BP33176 963 aa18.69■□□□□ 0.58
SNHG17-205ENST00000424235 FPGSQ05932 587 aa18.69■□□□□ 0.58
SNHG17-205ENST00000424235 TTLL4Q14679 1199 aa18.69■□□□□ 0.58
SNHG17-205ENST00000424235 FAM47CQ5HY64 1035 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms